RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 GRHL1Q9NZI5 618 aa16.97■□□□□ 0.31
PTPN5-201ENST00000358540 SIP14410 1827 aa16.97■□□□□ 0.31
PTPN5-201ENST00000358540 FAM187AA6NFU0 413 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 NFICP08651 508 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 VPS41P49754 854 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 BIRC2Q13490 618 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 ODF2Q5BJF6 829 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 CYP4A22Q5TCH4 519 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 EGFL6Q8IUX8 553 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 C2orf40Q9H1Z8 148 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 ERAP1Q9NZ08 941 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 BAIAP2L1Q9UHR4 511 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 R3HDM2Q9Y2K5 976 aaKnown RBP16.96■□□□□ 0.31
PTPN5-201ENST00000358540 SMIM23A6NLE4 172 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 BTBD19C9JJ37 291 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 PI4K2BG5E9Z4 385 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 TFDP1Q14186 410 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 ANKRD20A8PQ5CZ79 823 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 LDLRAD1Q5T700 205 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 TAPT1Q6NXT6 567 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 ANKS1BQ7Z6G8 1248 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 EIF1ADQ8N9N8 165 aaKnown RBP16.96■□□□□ 0.31
PTPN5-201ENST00000358540 ZC3H15Q8WU90 426 aaKnown RBP16.96■□□□□ 0.31
PTPN5-201ENST00000358540 L3MBTL3Q96JM7 780 aaPredicted RBP16.96■□□□□ 0.31
PTPN5-201ENST00000358540 FZD8Q9H461 694 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 GGA2Q9UJY4 613 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 GINS2Q9Y248 185 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 ASB14A6NK59 587 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 HMGB1P1B2RPK0 211 aaPredicted RBP16.96■□□□□ 0.31
PTPN5-201ENST00000358540 PROSCO94903 275 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 MYZAPP0CAP1 466 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 CD19P15391 556 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 HSPA6P17066 643 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 FGFR4P22455 802 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 CCNHP51946 323 aaPredicted RBP16.96■□□□□ 0.31
PTPN5-201ENST00000358540 SF3A3Q12874 501 aaKnown RBP eCLIP16.96■□□□□ 0.31
PTPN5-201ENST00000358540 PTP4A2Q12974 167 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 PPP1R7Q15435 360 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 TSHZ1Q6ZSZ6 1077 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 CCDC25Q86WR0 208 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.96■□□□□ 0.31
PTPN5-201ENST00000358540 RNF25Q96BH1 459 aaPredicted RBP16.96■□□□□ 0.31
PTPN5-201ENST00000358540 DDX27Q96GQ7 796 aaKnown RBP16.96■□□□□ 0.31
PTPN5-201ENST00000358540 PTPRHQ9HD43 1115 aa16.96■□□□□ 0.31
PTPN5-201ENST00000358540 CCL15-CCL14A0A0B4J2E2 113 aa16.95■□□□□ 0.3
PTPN5-201ENST00000358540 SHBGP04278 402 aa16.95■□□□□ 0.3
PTPN5-201ENST00000358540 MYBL1P10243 752 aa16.95■□□□□ 0.3
PTPN5-201ENST00000358540 RALAP11233 206 aa16.95■□□□□ 0.3
PTPN5-201ENST00000358540 CALRP27797 417 aaKnown RBP16.95■□□□□ 0.3
PTPN5-201ENST00000358540 PPP2R5EQ16537 467 aa16.95■□□□□ 0.3
PTPN5-201ENST00000358540 CCL15Q16663 113 aa16.95■□□□□ 0.3
PTPN5-201ENST00000358540 ACCSLQ4AC99 568 aa16.95■□□□□ 0.3
PTPN5-201ENST00000358540 TRIM11Q96F44 468 aa16.95■□□□□ 0.3
PTPN5-201ENST00000358540 IFT122Q9HBG6 1241 aa16.95■□□□□ 0.3
PTPN5-201ENST00000358540 TMBIM4Q9HC24 238 aa16.95■□□□□ 0.3
PTPN5-201ENST00000358540 DNAJC17Q9NVM6 304 aaKnown RBP16.95■□□□□ 0.3
PTPN5-201ENST00000358540 TJP2Q9UDY2 1190 aa16.95■□□□□ 0.3
PTPN5-201ENST00000358540 PCYOX1Q9UHG3 505 aa16.95■□□□□ 0.3
PTPN5-201ENST00000358540 DCDC2CA8MYV0 355 aa16.95■□□□□ 0.3
PTPN5-201ENST00000358540 SLC8A1P32418 973 aa16.95■□□□□ 0.3
PTPN5-201ENST00000358540 SCTRP47872 440 aa16.95■□□□□ 0.3
PTPN5-201ENST00000358540 ZNF132P52740 706 aa16.95■□□□□ 0.3
PTPN5-201ENST00000358540 KRT71Q3SY84 523 aa16.95■□□□□ 0.3
PTPN5-201ENST00000358540 PRUNE1Q86TP1 453 aa16.95■□□□□ 0.3
PTPN5-201ENST00000358540 CD302Q8IX05 232 aa16.95■□□□□ 0.3
PTPN5-201ENST00000358540 UBR7Q8N806 425 aa16.95■□□□□ 0.3
PTPN5-201ENST00000358540 MCEEQ96PE7 176 aa16.95■□□□□ 0.3
PTPN5-201ENST00000358540 GAS2O43903 313 aaKnown RBP16.94■□□□□ 0.3
PTPN5-201ENST00000358540 TNNC2P02585 160 aa16.94■□□□□ 0.3
PTPN5-201ENST00000358540 PROZP22891 400 aa16.94■□□□□ 0.3
PTPN5-201ENST00000358540 ASPAP45381 313 aa16.94■□□□□ 0.3
PTPN5-201ENST00000358540 IFFO1Q0D2I5 559 aa16.94■□□□□ 0.3
PTPN5-201ENST00000358540 SGSM1Q2NKQ1 1148 aa16.94■□□□□ 0.3
PTPN5-201ENST00000358540 DPH6Q7L8W6 267 aa16.94■□□□□ 0.3
PTPN5-201ENST00000358540 SEC16BQ96JE7 1060 aa16.94■□□□□ 0.3
PTPN5-201ENST00000358540 XYLT2Q9H1B5 865 aa16.94■□□□□ 0.3
PTPN5-201ENST00000358540 RPF1Q9H9Y2 349 aaKnown RBP16.94■□□□□ 0.3
PTPN5-201ENST00000358540 TMEM62Q0P6H9 643 aa16.94■□□□□ 0.3
PTPN5-201ENST00000358540 WDR72Q3MJ13 1102 aa16.94■□□□□ 0.3
PTPN5-201ENST00000358540 EMC10Q5UCC4 262 aa16.94■□□□□ 0.3
PTPN5-201ENST00000358540 KAZNQ674X7 775 aa16.94■□□□□ 0.3
PTPN5-201ENST00000358540 ANKRD36BP1Q96IX9 119 aa16.94■□□□□ 0.3
PTPN5-201ENST00000358540 CNTN6Q9UQ52 1028 aa16.94■□□□□ 0.3
PTPN5-201ENST00000358540 ECEL1O95672 775 aa16.94■□□□□ 0.3
PTPN5-201ENST00000358540 SARNPP82979 210 aaKnown RBP16.94■□□□□ 0.3
PTPN5-201ENST00000358540 KRT17Q04695 432 aa16.94■□□□□ 0.3
PTPN5-201ENST00000358540 CLUL1Q15846 466 aa16.94■□□□□ 0.3
PTPN5-201ENST00000358540 ZNF792Q3KQV3 632 aa16.94■□□□□ 0.3
PTPN5-201ENST00000358540 TLDC1Q6P9B6 456 aa16.94■□□□□ 0.3
PTPN5-201ENST00000358540 MAMDC4Q6UXC1 1216 aa16.94■□□□□ 0.3
PTPN5-201ENST00000358540 TRIM72Q6ZMU5 477 aa16.94■□□□□ 0.3
PTPN5-201ENST00000358540 PHF13Q86YI8 300 aaPredicted RBP16.94■□□□□ 0.3
PTPN5-201ENST00000358540 ARFGAP2Q8N6H7 521 aa16.94■□□□□ 0.3
PTPN5-201ENST00000358540 RNF217Q8TC41 542 aa16.94■□□□□ 0.3
PTPN5-201ENST00000358540 BRI3BPQ8WY22 251 aa16.94■□□□□ 0.3
PTPN5-201ENST00000358540 THOC1Q96FV9 657 aaKnown RBP16.94■□□□□ 0.3
PTPN5-201ENST00000358540 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.94■□□□□ 0.3
PTPN5-201ENST00000358540 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.94■□□□□ 0.3
PTPN5-201ENST00000358540 HMGXB4Q9UGU5 601 aa16.94■□□□□ 0.3
PTPN5-201ENST00000358540 PNMA3Q9UL41 463 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms