RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 CXCL9Q07325 125 aa15.35■□□□□ 0.05
SLC6A20-202ENST00000358525 SNAPC2Q13487 334 aa15.35■□□□□ 0.05
SLC6A20-202ENST00000358525 NBPF12Q5TAG4 269 aaPredicted RBP15.35■□□□□ 0.05
SLC6A20-202ENST00000358525 PPIL6Q8IXY8 311 aa15.35■□□□□ 0.05
SLC6A20-202ENST00000358525 TTC8Q8TAM2 541 aa15.35■□□□□ 0.05
SLC6A20-202ENST00000358525 PDCD6IPQ8WUM4 868 aaKnown RBP15.35■□□□□ 0.05
SLC6A20-202ENST00000358525 WWP1Q9H0M0 922 aa15.35■□□□□ 0.05
SLC6A20-202ENST00000358525 VIRMAQ69YN4 1812 aaKnown RBP15.35■□□□□ 0.05
SLC6A20-202ENST00000358525 CCDC78A2IDD5 438 aa15.35■□□□□ 0.05
SLC6A20-202ENST00000358525 PPFIA2O75334 1257 aa15.35■□□□□ 0.05
SLC6A20-202ENST00000358525 CHEK2O96017 543 aa15.35■□□□□ 0.05
SLC6A20-202ENST00000358525 FAM153BP0C7A2 387 aa15.35■□□□□ 0.05
SLC6A20-202ENST00000358525 CACNB2Q08289 660 aaPredicted RBP15.35■□□□□ 0.05
SLC6A20-202ENST00000358525 FAM153CQ494X1 144 aa15.35■□□□□ 0.05
SLC6A20-202ENST00000358525 KCNT1Q5JUK3 1230 aa15.35■□□□□ 0.05
SLC6A20-202ENST00000358525 KIF2BQ8N4N8 673 aa15.35■□□□□ 0.05
SLC6A20-202ENST00000358525 PAK5Q9P286 719 aa15.35■□□□□ 0.05
SLC6A20-202ENST00000358525 FAM153AQ9UHL3 310 aa15.35■□□□□ 0.05
SLC6A20-202ENST00000358525 TRIM33Q9UPN9 1127 aa15.35■□□□□ 0.05
SLC6A20-202ENST00000358525 PJA2O43164 708 aa15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 CCDC22O60826 627 aa15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 ZC3H11AO75152 810 aaKnown RBP eCLIP15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 KDSRQ06136 332 aa15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 HABP4Q5JVS0 413 aaKnown RBP15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 CGRRF1Q99675 332 aa15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 GNGT2O14610 69 aa15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 ENO1P06733 434 aaKnown RBP15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 CTCFP49711 727 aaPredicted RBP15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 CLCN3P51790 818 aa15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 POLE2P56282 527 aa15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 MYBPC2Q14324 1141 aa15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 FRMPD4Q14CM0 1322 aa15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 WDR59Q6PJI9 974 aa15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 EPAS1Q99814 870 aa15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 NPTXRO95502 500 aa15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 CTSHP09668 335 aa15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 CLEC16AQ2KHT3 1053 aa15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 HSP90AA5PQ58FG0 334 aa15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 SP110Q9HB58 689 aa15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 PGK2P07205 417 aa15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 HOXA10P31260 410 aaPredicted RBP15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 KRT80Q6KB66 452 aa15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 ALKBH8Q96BT7 664 aaKnown RBP15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 MED15Q96RN5 788 aa15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 KCNMB3Q9NPA1 279 aa15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 FAM198AQ9UFP1 575 aa15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 GSTA4O15217 222 aa15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 CBWD6Q4V339 395 aa15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 FASTKD1Q53R41 847 aaKnown RBP15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 CBWD3Q5JTY5 395 aa15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 CBWD5Q5RIA9 395 aa15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 CERS5Q8N5B7 392 aa15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 OR6P1Q8NGX9 317 aa15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 FAM129AQ9BZQ8 928 aa15.34■□□□□ 0.05
SLC6A20-202ENST00000358525 SH3BGRP55822 239 aaPredicted RBP15.33■□□□□ 0.05
SLC6A20-202ENST00000358525 LRRC55Q6ZSA7 311 aa15.33■□□□□ 0.05
SLC6A20-202ENST00000358525 USP33Q8TEY7 942 aa15.33■□□□□ 0.05
SLC6A20-202ENST00000358525 LBHD1Q9BQE6 289 aaPredicted RBP15.33■□□□□ 0.05
SLC6A20-202ENST00000358525 KNDC1Q76NI1 1749 aa15.33■□□□□ 0.04
SLC6A20-202ENST00000358525 RAP1GAPP47736 663 aa15.33■□□□□ 0.04
SLC6A20-202ENST00000358525 NLRP11P59045 1033 aaKnown RBP15.33■□□□□ 0.04
SLC6A20-202ENST00000358525 RIBC1Q8N443 379 aaPredicted RBP15.33■□□□□ 0.04
SLC6A20-202ENST00000358525 TNFRSF25Q93038 417 aa15.33■□□□□ 0.04
SLC6A20-202ENST00000358525 PPP1R36Q96LQ0 422 aa15.33■□□□□ 0.04
SLC6A20-202ENST00000358525 UPF3AQ9H1J1 476 aaKnown RBP15.33■□□□□ 0.04
SLC6A20-202ENST00000358525 CDC42EP4Q9H3Q1 356 aaKnown RBP15.33■□□□□ 0.04
SLC6A20-202ENST00000358525 PPCSQ9HAB8 311 aa15.33■□□□□ 0.04
SLC6A20-202ENST00000358525 PCDHAC2Q9Y5I4 1007 aa15.33■□□□□ 0.04
SLC6A20-202ENST00000358525 RARGP13631 454 aa15.33■□□□□ 0.04
SLC6A20-202ENST00000358525 ELF1P32519 619 aa15.33■□□□□ 0.04
SLC6A20-202ENST00000358525 PTENP60484 403 aa15.33■□□□□ 0.04
SLC6A20-202ENST00000358525 ERVK-9P63128 1117 aa15.33■□□□□ 0.04
SLC6A20-202ENST00000358525 TMCO4Q5TGY1 634 aa15.33■□□□□ 0.04
SLC6A20-202ENST00000358525 C11orf63Q6NUN7 778 aa15.33■□□□□ 0.04
SLC6A20-202ENST00000358525 C15orf52Q6ZUT6 534 aaKnown RBP15.33■□□□□ 0.04
SLC6A20-202ENST00000358525 LONP2Q86WA8 852 aa15.33■□□□□ 0.04
SLC6A20-202ENST00000358525 ABCF3Q9NUQ8 709 aa15.33■□□□□ 0.04
SLC6A20-202ENST00000358525 FMN2Q9NZ56 1722 aa15.33■□□□□ 0.04
SLC6A20-202ENST00000358525 E2F8A0AVK6 867 aa15.33■□□□□ 0.04
SLC6A20-202ENST00000358525 RCCD1A6NED2 376 aa15.33■□□□□ 0.04
SLC6A20-202ENST00000358525 TISP43B9A030 160 aa15.33■□□□□ 0.04
SLC6A20-202ENST00000358525 EEF2KO00418 725 aaKnown RBP15.33■□□□□ 0.04
SLC6A20-202ENST00000358525 FAXCQ5TGI0 409 aa15.33■□□□□ 0.04
SLC6A20-202ENST00000358525 AKT1S1Q96B36 256 aa15.33■□□□□ 0.04
SLC6A20-202ENST00000358525 WHRNQ9P202 907 aa15.33■□□□□ 0.04
SLC6A20-202ENST00000358525 USP20Q9Y2K6 914 aa15.33■□□□□ 0.04
SLC6A20-202ENST00000358525 AKAP12Q02952 1782 aa15.33■□□□□ 0.04
SLC6A20-202ENST00000358525 CASZ1Q86V15 1759 aa15.32■□□□□ 0.04
SLC6A20-202ENST00000358525 PDE2AO00408 941 aaPredicted RBP15.32■□□□□ 0.04
SLC6A20-202ENST00000358525 PGM1P36871 562 aa15.32■□□□□ 0.04
SLC6A20-202ENST00000358525 GEMIN4P57678 1058 aaKnown RBP15.32■□□□□ 0.04
SLC6A20-202ENST00000358525 PRAMEP78395 509 aa15.32■□□□□ 0.04
SLC6A20-202ENST00000358525 DNAJC3Q13217 504 aa15.32■□□□□ 0.04
SLC6A20-202ENST00000358525 URGCPQ8TCY9 931 aa15.32■□□□□ 0.04
SLC6A20-202ENST00000358525 AENQ8WTP8 325 aaKnown RBP15.32■□□□□ 0.04
SLC6A20-202ENST00000358525 DNAJC19Q96DA6 116 aa15.32■□□□□ 0.04
SLC6A20-202ENST00000358525 FGRP09769 529 aa15.32■□□□□ 0.04
SLC6A20-202ENST00000358525 AP2B1P63010 937 aa15.32■□□□□ 0.04
SLC6A20-202ENST00000358525 CDC42EP1Q00587 391 aa15.32■□□□□ 0.04
SLC6A20-202ENST00000358525 AMHR2Q16671 573 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms