RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 VCAM1P19320 739 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 MLH1P40692 756 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 PMS1P54277 932 aaKnown RBP4.23□□□□□ -1.73
CNGA1-201ENST00000358519 NAPAP54920 295 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 SH3BGRP55822 239 aaPredicted RBP4.23□□□□□ -1.73
CNGA1-201ENST00000358519 RTP1P59025 263 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 OCRLQ01968 901 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 LRRC63Q05C16 580 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 SULT2A1Q06520 285 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 MGAT5Q09328 741 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 MAP7Q14244 749 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 KPNB1Q14974 876 aaKnown RBP4.23□□□□□ -1.73
CNGA1-201ENST00000358519 LRRC14Q15048 493 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 CCDC6Q16204 474 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 CNGA2Q16280 664 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 SLC44A4Q53GD3 710 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 WASHC2DQ5SRD0 308 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 MEI1Q5TIA1 1274 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 ZNF658Q5TYW1 1059 aaPredicted RBP4.23□□□□□ -1.73
CNGA1-201ENST00000358519 SLFN13Q68D06 897 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 GPIHBP1Q8IV16 184 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 MAPKAPK5Q8IW41 473 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 SCUBE1Q8IWY4 988 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 ABRAQ8N0Z2 381 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 AGGF1Q8N302 714 aaeCLIP4.23□□□□□ -1.73
CNGA1-201ENST00000358519 C4orf32Q8N8J7 132 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 NRG4Q8WWG1 115 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 PPP2R3CQ969Q6 453 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 EEF2KMTQ96G04 330 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 CEP95Q96GE4 821 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 TMEM237Q96Q45 408 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 MTMR9Q96QG7 549 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 LRMDAQ9H2I8 198 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 ST6GALNAC4Q9H4F1 302 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 AZI2Q9H6S1 392 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 TBC1D22BQ9NU19 505 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 TXLNGQ9NUQ3 528 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 HOXC10Q9NYD6 342 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 LARSQ9P2J5 1176 aaKnown RBP4.23□□□□□ -1.73
CNGA1-201ENST00000358519 MAGEC2Q9UBF1 373 aaPredicted RBP4.23□□□□□ -1.73
CNGA1-201ENST00000358519 PRKAG3Q9UGI9 489 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 HAO1Q9UJM8 370 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 ZBTB21Q9ULJ3 1066 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 KCNJ14Q9UNX9 436 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 R3HDM2Q9Y2K5 976 aaKnown RBP4.23□□□□□ -1.73
CNGA1-201ENST00000358519 USP20Q9Y2K6 914 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 GDAQ9Y2T3 454 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 MROH7Q68CQ1 1323 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 ZMYM2Q9UBW7 1377 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 POLR2AP24928 1970 aaKnown RBP4.23□□□□□ -1.73
CNGA1-201ENST00000358519 TMEM265A0A087WTH1 108 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 A0A1W2PQJ5 194 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 A6NJR5 290 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 CCDC169A6NNP5 214 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 YDJCA8MPS7 323 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 EIF3DO15371 548 aaKnown RBP eCLIP4.23□□□□□ -1.73
CNGA1-201ENST00000358519 ZBED4O75132 1171 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 FARP2O94887 1054 aaPredicted RBP4.23□□□□□ -1.73
CNGA1-201ENST00000358519 RHOBTB3O94955 611 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 LMNAP02545 664 aaKnown RBP4.23□□□□□ -1.73
CNGA1-201ENST00000358519 LYNP07948 512 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 KLRK1P26718 216 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 HNRNPH3P31942 346 aaKnown RBP4.23□□□□□ -1.73
CNGA1-201ENST00000358519 SLC1A4P43007 532 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 JAK3P52333 1124 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 ADARP55265 1226 aaKnown RBP4.23□□□□□ -1.73
CNGA1-201ENST00000358519 UBXN2AP68543 259 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 HPCAP84074 193 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 LMNB2Q03252 620 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 PPATQ06203 517 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 GFPT1Q06210 699 aaPredicted RBP4.23□□□□□ -1.73
CNGA1-201ENST00000358519 PPP2R5CQ13362 524 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 PCBP1Q15365 356 aaKnown RBP eCLIP4.23□□□□□ -1.73
CNGA1-201ENST00000358519 NPY5RQ15761 445 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 TMEM119Q4V9L6 283 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 KHDC1Q4VXA5 237 aaKnown RBP4.23□□□□□ -1.73
CNGA1-201ENST00000358519 RIPOR1Q6ZS17 1223 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 MOB2Q70IA6 237 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 Q7L0L9 218 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 FASTKD5Q7L8L6 764 aaKnown RBP4.23□□□□□ -1.73
CNGA1-201ENST00000358519 SPATA24Q86W54 205 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 PALB2Q86YC2 1186 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 MAP7D3Q8IWC1 876 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 ZC3H3Q8IXZ2 948 aaKnown RBP4.23□□□□□ -1.73
CNGA1-201ENST00000358519 STAG2Q8N3U4 1231 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 SH3TC2Q8TF17 1288 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 SCFD2Q8WU76 684 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 HAUS1Q96CS2 278 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 GPRASP2Q96D09 838 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 CEP63Q96MT8 703 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 CENPKQ9BS16 269 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 TBC1D10AQ9BXI6 508 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 AP1M1Q9BXS5 423 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 NACA2Q9H009 215 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 CCDC113Q9H0I3 377 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 DDX47Q9H0S4 455 aaKnown RBP4.23□□□□□ -1.73
CNGA1-201ENST00000358519 METTL5Q9NRN9 209 aaKnown RBP4.23□□□□□ -1.73
CNGA1-201ENST00000358519 KBTBD4Q9NVX7 518 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 ARHGEF38Q9NXL2 777 aa4.23□□□□□ -1.73
CNGA1-201ENST00000358519 KLHL14Q9P2G3 628 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms