RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 MRPL45Q9BRJ2 306 aaKnown RBP16.31■□□□□ 0.2
TPM1-206ENST00000358278 SNX25Q9H3E2 840 aa16.31■□□□□ 0.2
TPM1-206ENST00000358278 CYP3A43Q9HB55 503 aa16.31■□□□□ 0.2
TPM1-206ENST00000358278 CHST7Q9NS84 486 aa16.31■□□□□ 0.2
TPM1-206ENST00000358278 PRRC2BQ5JSZ5 2229 aaKnown RBP16.3■□□□□ 0.2
TPM1-206ENST00000358278 TACC1O75410 805 aa16.3■□□□□ 0.2
TPM1-206ENST00000358278 CTSAP10619 480 aa16.3■□□□□ 0.2
TPM1-206ENST00000358278 UCHL3P15374 230 aa16.3■□□□□ 0.2
TPM1-206ENST00000358278 RFX1P22670 979 aa16.3■□□□□ 0.2
TPM1-206ENST00000358278 DNAJB1P25685 340 aa16.3■□□□□ 0.2
TPM1-206ENST00000358278 LHX1P48742 406 aa16.3■□□□□ 0.2
TPM1-206ENST00000358278 MFAP3P55082 362 aa16.3■□□□□ 0.2
TPM1-206ENST00000358278 RAPGEF1Q13905 1077 aa16.3■□□□□ 0.2
TPM1-206ENST00000358278 PSMD5Q16401 504 aa16.3■□□□□ 0.2
TPM1-206ENST00000358278 KLHDC7AQ5VTJ3 777 aa16.3■□□□□ 0.2
TPM1-206ENST00000358278 PLPP4Q5VZY2 271 aa16.3■□□□□ 0.2
TPM1-206ENST00000358278 ZNF280DQ6N043 979 aa16.3■□□□□ 0.2
TPM1-206ENST00000358278 PRSS55Q6UWB4 352 aaPredicted RBP16.3■□□□□ 0.2
TPM1-206ENST00000358278 ENOSF1Q7L5Y1 443 aa16.3■□□□□ 0.2
TPM1-206ENST00000358278 OR6B3Q8NGW1 331 aa16.3■□□□□ 0.2
TPM1-206ENST00000358278 SPATA18Q8TC71 538 aa16.3■□□□□ 0.2
TPM1-206ENST00000358278 MICAL1Q8TDZ2 1067 aa16.3■□□□□ 0.2
TPM1-206ENST00000358278 KBTBD7Q8WVZ9 684 aa16.3■□□□□ 0.2
TPM1-206ENST00000358278 AUTS2Q8WXX7 1259 aa16.3■□□□□ 0.2
TPM1-206ENST00000358278 SDCBP2Q9H190 292 aa16.3■□□□□ 0.2
TPM1-206ENST00000358278 GRPEL1Q9HAV7 217 aa16.3■□□□□ 0.2
TPM1-206ENST00000358278 DDX43Q9NXZ2 648 aaKnown RBP16.3■□□□□ 0.2
TPM1-206ENST00000358278 SSX2IPQ9Y2D8 614 aa16.3■□□□□ 0.2
TPM1-206ENST00000358278 FHOD1Q9Y613 1164 aa16.3■□□□□ 0.2
TPM1-206ENST00000358278 PTPRDP23468 1912 aa16.3■□□□□ 0.2
TPM1-206ENST00000358278 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.29■□□□□ 0.2
TPM1-206ENST00000358278 H7C4K7 107 aa16.29■□□□□ 0.2
TPM1-206ENST00000358278 LPXNO60711 386 aa16.29■□□□□ 0.2
TPM1-206ENST00000358278 WARSP23381 471 aaKnown RBP16.29■□□□□ 0.2
TPM1-206ENST00000358278 ERVFC1P60507 584 aa16.29■□□□□ 0.2
TPM1-206ENST00000358278 SMC1AQ14683 1233 aaKnown RBP16.29■□□□□ 0.2
TPM1-206ENST00000358278 ARHGAP44Q17R89 818 aa16.29■□□□□ 0.2
TPM1-206ENST00000358278 CTXN3Q4LDR2 81 aa16.29■□□□□ 0.2
TPM1-206ENST00000358278 HABP4Q5JVS0 413 aaKnown RBP16.29■□□□□ 0.2
TPM1-206ENST00000358278 LIMS2Q7Z4I7 341 aa16.29■□□□□ 0.2
TPM1-206ENST00000358278 THEM5Q8N1Q8 247 aa16.29■□□□□ 0.2
TPM1-206ENST00000358278 TTC39CQ8N584 583 aa16.29■□□□□ 0.2
TPM1-206ENST00000358278 PIK3R5Q8WYR1 880 aa16.29■□□□□ 0.2
TPM1-206ENST00000358278 KAT5Q92993 513 aa16.29■□□□□ 0.2
TPM1-206ENST00000358278 LMAN2LQ9H0V9 348 aa16.29■□□□□ 0.2
TPM1-206ENST00000358278 TTYH1Q9H313 450 aaPredicted RBP16.29■□□□□ 0.2
TPM1-206ENST00000358278 CISHQ9NSE2 258 aa16.29■□□□□ 0.2
TPM1-206ENST00000358278 DNAJC12Q9UKB3 198 aa16.29■□□□□ 0.2
TPM1-206ENST00000358278 RFXAPO00287 272 aa16.28■□□□□ 0.2
TPM1-206ENST00000358278 OAZ2O95190 189 aa16.28■□□□□ 0.2
TPM1-206ENST00000358278 GNL1P36915 607 aaPredicted RBP16.28■□□□□ 0.2
TPM1-206ENST00000358278 PBX1P40424 430 aa16.28■□□□□ 0.2
TPM1-206ENST00000358278 POLR2FP61218 127 aaKnown RBP16.28■□□□□ 0.2
TPM1-206ENST00000358278 CREMQ03060 361 aa16.28■□□□□ 0.2
TPM1-206ENST00000358278 PTPN14Q15678 1187 aa16.28■□□□□ 0.2
TPM1-206ENST00000358278 PTPROQ16827 1216 aa16.28■□□□□ 0.2
TPM1-206ENST00000358278 KIAA0319Q5VV43 1072 aa16.28■□□□□ 0.2
TPM1-206ENST00000358278 IQCEQ6IPM2 695 aa16.28■□□□□ 0.2
TPM1-206ENST00000358278 KREMEN1Q96MU8 473 aa16.28■□□□□ 0.2
TPM1-206ENST00000358278 GANQ9H2C0 597 aa16.28■□□□□ 0.2
TPM1-206ENST00000358278 FAM124BQ9H5Z6 455 aaPredicted RBP16.28■□□□□ 0.2
TPM1-206ENST00000358278 NGRNQ9NPE2 291 aaKnown RBP16.28■□□□□ 0.2
TPM1-206ENST00000358278 FSD2A1L4K1 749 aa16.28■□□□□ 0.2
TPM1-206ENST00000358278 A8MXQ7 604 aa16.28■□□□□ 0.2
TPM1-206ENST00000358278 GABRDO14764 452 aa16.28■□□□□ 0.2
TPM1-206ENST00000358278 EPHB6O15197 1021 aa16.28■□□□□ 0.2
TPM1-206ENST00000358278 NOL4O94818 638 aa16.28■□□□□ 0.2
TPM1-206ENST00000358278 CXCL14O95715 111 aa16.28■□□□□ 0.2
TPM1-206ENST00000358278 FAM163BP0C2L3 166 aa16.28■□□□□ 0.2
TPM1-206ENST00000358278 PCSK1P29120 753 aa16.28■□□□□ 0.2
TPM1-206ENST00000358278 ZNF75DP51815 510 aa16.28■□□□□ 0.2
TPM1-206ENST00000358278 INCA1Q0VD86 236 aa16.28■□□□□ 0.2
TPM1-206ENST00000358278 PDE12Q6L8Q7 609 aaKnown RBP16.28■□□□□ 0.2
TPM1-206ENST00000358278 DPY19L2P1Q6NXN4 242 aa16.28■□□□□ 0.2
TPM1-206ENST00000358278 CACNA2D4Q7Z3S7 1137 aa16.28■□□□□ 0.2
TPM1-206ENST00000358278 OSTM1Q86WC4 334 aa16.28■□□□□ 0.2
TPM1-206ENST00000358278 LNX1Q8TBB1 728 aaPredicted RBP16.28■□□□□ 0.2
TPM1-206ENST00000358278 FAM161BQ96MY7 647 aa16.28■□□□□ 0.2
TPM1-206ENST00000358278 DNAI2Q9GZS0 605 aa16.28■□□□□ 0.2
TPM1-206ENST00000358278 PRDM12Q9H4Q4 367 aa16.28■□□□□ 0.2
TPM1-206ENST00000358278 NLRC4Q9NPP4 1024 aa16.28■□□□□ 0.2
TPM1-206ENST00000358278 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.28■□□□□ 0.2
TPM1-206ENST00000358278 AJAP1Q9UKB5 411 aaPredicted RBP16.28■□□□□ 0.2
TPM1-206ENST00000358278 BARX2Q9UMQ3 279 aaPredicted RBP16.28■□□□□ 0.2
TPM1-206ENST00000358278 STXBP5LQ9Y2K9 1186 aa16.28■□□□□ 0.2
TPM1-206ENST00000358278 DAAM1Q9Y4D1 1078 aa16.28■□□□□ 0.2
TPM1-206ENST00000358278 EYSQ5T1H1 3165 aa16.27■□□□□ 0.2
TPM1-206ENST00000358278 CILPO75339 1184 aa16.27■□□□□ 0.19
TPM1-206ENST00000358278 PDGFRBP09619 1106 aa16.27■□□□□ 0.19
TPM1-206ENST00000358278 KRT5P13647 590 aa16.27■□□□□ 0.19
TPM1-206ENST00000358278 RPL17P18621 184 aaKnown RBP16.27■□□□□ 0.19
TPM1-206ENST00000358278 ACAT1P24752 427 aaKnown RBP16.27■□□□□ 0.19
TPM1-206ENST00000358278 IRS1P35568 1242 aa16.27■□□□□ 0.19
TPM1-206ENST00000358278 NDST1P52848 882 aa16.27■□□□□ 0.19
TPM1-206ENST00000358278 TSPY1Q01534 308 aa16.27■□□□□ 0.19
TPM1-206ENST00000358278 CAMK1Q14012 370 aa16.27■□□□□ 0.19
TPM1-206ENST00000358278 MRPL58Q14197 206 aaKnown RBP16.27■□□□□ 0.19
TPM1-206ENST00000358278 GSE1Q14687 1217 aa16.27■□□□□ 0.19
TPM1-206ENST00000358278 ZNF394Q53GI3 561 aa16.27■□□□□ 0.19
TPM1-206ENST00000358278 SPECC1LQ69YQ0 1117 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms