RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 MGAT5BQ3V5L5 792 aa11.52□□□□□ -0.57
CAPN3-204ENST00000356316 SV2CQ496J9 727 aa11.52□□□□□ -0.57
CAPN3-204ENST00000356316 SLC39A12Q504Y0 691 aa11.52□□□□□ -0.57
CAPN3-204ENST00000356316 SLC39A4Q6P5W5 647 aa11.52□□□□□ -0.57
CAPN3-204ENST00000356316 VITQ6UXI7 678 aa11.52□□□□□ -0.57
CAPN3-204ENST00000356316 USP49Q70CQ1 688 aa11.52□□□□□ -0.57
CAPN3-204ENST00000356316 SFR1Q86XK3 245 aa11.52□□□□□ -0.57
CAPN3-204ENST00000356316 NT5DC4Q86YG4 428 aa11.52□□□□□ -0.57
CAPN3-204ENST00000356316 TMEM130Q8N3G9 435 aa11.52□□□□□ -0.57
CAPN3-204ENST00000356316 ATAD1Q8NBU5 361 aa11.52□□□□□ -0.57
CAPN3-204ENST00000356316 C2orf15Q8WU43 125 aaKnown RBP11.52□□□□□ -0.57
CAPN3-204ENST00000356316 CACTINQ8WUQ7 758 aaKnown RBP11.52□□□□□ -0.57
CAPN3-204ENST00000356316 FAM3CQ92520 227 aa11.52□□□□□ -0.57
CAPN3-204ENST00000356316 CLDN23Q96B33 292 aa11.52□□□□□ -0.57
CAPN3-204ENST00000356316 GCNAQ96QF7 691 aa11.52□□□□□ -0.57
CAPN3-204ENST00000356316 PYM1Q9BRP8 204 aaKnown RBP11.52□□□□□ -0.57
CAPN3-204ENST00000356316 PANK2Q9BZ23 570 aa11.52□□□□□ -0.57
CAPN3-204ENST00000356316 ZSCAN16Q9H4T2 348 aaPredicted RBP11.52□□□□□ -0.57
CAPN3-204ENST00000356316 TRPV4Q9HBA0 871 aa11.52□□□□□ -0.57
CAPN3-204ENST00000356316 METRNQ9UJH8 293 aa11.52□□□□□ -0.57
CAPN3-204ENST00000356316 FBXO2Q9UK22 296 aaPredicted RBP11.52□□□□□ -0.57
CAPN3-204ENST00000356316 NDRG2Q9UN36 371 aaKnown RBP11.52□□□□□ -0.57
CAPN3-204ENST00000356316 STYXL1Q9Y6J8 313 aa11.52□□□□□ -0.57
CAPN3-204ENST00000356316 TCHHQ07283 1943 aa11.52□□□□□ -0.57
CAPN3-204ENST00000356316 ANK1P16157 1881 aa11.51□□□□□ -0.57
CAPN3-204ENST00000356316 ANO9A1A5B4 782 aa11.51□□□□□ -0.57
CAPN3-204ENST00000356316 MTMR11A4FU01 709 aa11.51□□□□□ -0.57
CAPN3-204ENST00000356316 HEPACAM2A8MVW5 462 aa11.51□□□□□ -0.57
CAPN3-204ENST00000356316 KPNA7A9QM74 516 aa11.51□□□□□ -0.57
CAPN3-204ENST00000356316 TISP43B9A030 160 aa11.51□□□□□ -0.57
CAPN3-204ENST00000356316 PPEF2O14830 753 aa11.51□□□□□ -0.57
CAPN3-204ENST00000356316 SPTLC1O15269 473 aa11.51□□□□□ -0.57
CAPN3-204ENST00000356316 MOSPD3O75425 235 aa11.51□□□□□ -0.57
CAPN3-204ENST00000356316 CYP11A1P05108 521 aa11.51□□□□□ -0.57
CAPN3-204ENST00000356316 PNPLA4P41247 253 aa11.51□□□□□ -0.57
CAPN3-204ENST00000356316 STAT6P42226 847 aa11.51□□□□□ -0.57
CAPN3-204ENST00000356316 ID4P47928 161 aa11.51□□□□□ -0.57
CAPN3-204ENST00000356316 KPNA1P52294 538 aaPredicted RBP11.51□□□□□ -0.57
CAPN3-204ENST00000356316 SMARCB1Q12824 385 aa11.51□□□□□ -0.57
CAPN3-204ENST00000356316 ALCAMQ13740 583 aa11.51□□□□□ -0.57
CAPN3-204ENST00000356316 C1orf228Q6PIY5 440 aa11.51□□□□□ -0.57
CAPN3-204ENST00000356316 STXBP4Q6ZWJ1 553 aa11.51□□□□□ -0.57
CAPN3-204ENST00000356316 DCP1BQ8IZD4 617 aaKnown RBP11.51□□□□□ -0.57
CAPN3-204ENST00000356316 SHKBP1Q8TBC3 707 aa11.51□□□□□ -0.57
CAPN3-204ENST00000356316 NOC3LQ8WTT2 800 aaKnown RBP11.51□□□□□ -0.57
CAPN3-204ENST00000356316 RUBCNQ92622 972 aa11.51□□□□□ -0.57
CAPN3-204ENST00000356316 SECISBP2LQ93073 1101 aaKnown RBP11.51□□□□□ -0.57
CAPN3-204ENST00000356316 PSMG2Q969U7 264 aa11.51□□□□□ -0.57
CAPN3-204ENST00000356316 ZNF560Q96MR9 790 aa11.51□□□□□ -0.57
CAPN3-204ENST00000356316 CLIC6Q96NY7 704 aa11.51□□□□□ -0.57
CAPN3-204ENST00000356316 FIZ1Q96SL8 496 aa11.51□□□□□ -0.57
CAPN3-204ENST00000356316 SEPT5Q99719 369 aaPredicted RBP11.51□□□□□ -0.57
CAPN3-204ENST00000356316 FAM213AQ9BRX8 229 aa11.51□□□□□ -0.57
CAPN3-204ENST00000356316 LRRC27Q9C0I9 530 aa11.51□□□□□ -0.57
CAPN3-204ENST00000356316 LMAN1LQ9HAT1 526 aa11.51□□□□□ -0.57
CAPN3-204ENST00000356316 TBC1D7Q9P0N9 293 aa11.51□□□□□ -0.57
CAPN3-204ENST00000356316 PCDHGA2Q9Y5H1 932 aa11.51□□□□□ -0.57
CAPN3-204ENST00000356316 PIAS3Q9Y6X2 628 aa11.51□□□□□ -0.57
CAPN3-204ENST00000356316 MYMKA6NI61 221 aa11.5□□□□□ -0.57
CAPN3-204ENST00000356316 CHADO15335 359 aa11.5□□□□□ -0.57
CAPN3-204ENST00000356316 GABRR2P28476 465 aa11.5□□□□□ -0.57
CAPN3-204ENST00000356316 NRLP54845 237 aa11.5□□□□□ -0.57
CAPN3-204ENST00000356316 MLLT6P55198 1093 aaPredicted RBP11.5□□□□□ -0.57
CAPN3-204ENST00000356316 TFAMQ00059 246 aaKnown RBP11.5□□□□□ -0.57
CAPN3-204ENST00000356316 TSPY1Q01534 308 aa11.5□□□□□ -0.57
CAPN3-204ENST00000356316 RESTQ13127 1097 aa11.5□□□□□ -0.57
CAPN3-204ENST00000356316 L1TD1Q5T7N2 865 aaKnown RBP11.5□□□□□ -0.57
CAPN3-204ENST00000356316 GPR158Q5T848 1215 aa11.5□□□□□ -0.57
CAPN3-204ENST00000356316 FAM173BQ6P4H8 233 aa11.5□□□□□ -0.57
CAPN3-204ENST00000356316 GPIHBP1Q8IV16 184 aa11.5□□□□□ -0.57
CAPN3-204ENST00000356316 ARID3BQ8IVW6 561 aaPredicted RBP11.5□□□□□ -0.57
CAPN3-204ENST00000356316 CCDC65Q8IXS2 484 aa11.5□□□□□ -0.57
CAPN3-204ENST00000356316 KIAA2013Q8IYS2 634 aa11.5□□□□□ -0.57
CAPN3-204ENST00000356316 MAML2Q8IZL2 1156 aaPredicted RBP11.5□□□□□ -0.57
CAPN3-204ENST00000356316 SPPL2BQ8TCT7 592 aa11.5□□□□□ -0.57
CAPN3-204ENST00000356316 MSANTD3Q96H12 275 aa11.5□□□□□ -0.57
CAPN3-204ENST00000356316 INTS4Q96HW7 963 aaKnown RBP11.5□□□□□ -0.57
CAPN3-204ENST00000356316 TMEM209Q96SK2 561 aa11.5□□□□□ -0.57
CAPN3-204ENST00000356316 IER2Q9BTL4 223 aa11.5□□□□□ -0.57
CAPN3-204ENST00000356316 LRRC3Q9BY71 257 aa11.5□□□□□ -0.57
CAPN3-204ENST00000356316 FAM126AQ9BYI3 521 aaPredicted RBP11.5□□□□□ -0.57
CAPN3-204ENST00000356316 ZCWPW1Q9H0M4 648 aa11.5□□□□□ -0.57
CAPN3-204ENST00000356316 CRISPLD1Q9H336 500 aa11.5□□□□□ -0.57
CAPN3-204ENST00000356316 TMEM206Q9H813 350 aa11.5□□□□□ -0.57
CAPN3-204ENST00000356316 PANK4Q9NVE7 773 aa11.5□□□□□ -0.57
CAPN3-204ENST00000356316 THG1LQ9NWX6 298 aaKnown RBP11.5□□□□□ -0.57
CAPN3-204ENST00000356316 ZSCAN32Q9NX65 697 aa11.5□□□□□ -0.57
CAPN3-204ENST00000356316 NCDNQ9UBB6 729 aa11.5□□□□□ -0.57
CAPN3-204ENST00000356316 TICRRQ7Z2Z1 1910 aa11.5□□□□□ -0.57
CAPN3-204ENST00000356316 COL4A3Q01955 1670 aa11.49□□□□□ -0.57
CAPN3-204ENST00000356316 PATJQ8NI35 1801 aa11.49□□□□□ -0.57
CAPN3-204ENST00000356316 HUS1O60921 280 aa11.49□□□□□ -0.57
CAPN3-204ENST00000356316 SOAT2O75908 522 aa11.49□□□□□ -0.57
CAPN3-204ENST00000356316 VNN2O95498 520 aa11.49□□□□□ -0.57
CAPN3-204ENST00000356316 CCNE1P24864 410 aa11.49□□□□□ -0.57
CAPN3-204ENST00000356316 CDC25CP30307 473 aa11.49□□□□□ -0.57
CAPN3-204ENST00000356316 MTAPQ13126 283 aa11.49□□□□□ -0.57
CAPN3-204ENST00000356316 LRRC32Q14392 662 aa11.49□□□□□ -0.57
CAPN3-204ENST00000356316 SLC39A14Q15043 492 aa11.49□□□□□ -0.57
CAPN3-204ENST00000356316 STK38Q15208 465 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms