RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 HIST1H2AHQ96KK5 128 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 HIST1H2AJQ99878 128 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 H2AFJQ9BTM1 129 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 FANCEQ9HB96 536 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 SNX13Q9Y5W8 968 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 AKT1P31749 480 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 GRIK1P39086 918 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 IL12RB1P42701 662 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 SLC1A1P43005 524 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 SERPINB9P50453 376 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 ZSWIM7Q19AV6 140 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 SHROOM1Q2M3G4 852 aaPredicted RBP11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 GPD1LQ8N335 351 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 CDCA7Q9BWT1 371 aaPredicted RBP11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 ZNF341Q9BYN7 854 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 C6orf62Q9GZU0 229 aaPredicted RBP11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 PFASO15067 1338 aa11.51□□□□□ -0.57
GTF3C1-201ENST00000356183 ITGAXP20702 1163 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 BARGINQ6ZT62 677 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 LPCAT2Q7L5N7 544 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 MOV10L1Q9BXT6 1211 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 DDX18Q9NVP1 670 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 HPCAP84074 193 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 GTF2H3Q13889 308 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 BTBD8Q5XKL5 378 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 TRIM72Q6ZMU5 477 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 ARHGAP22Q7Z5H3 698 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 DGKHQ86XP1 1220 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 SCUBE1Q8IWY4 988 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 MMGT1Q8N4V1 131 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 ZNF302Q9NR11 478 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 RBAKQ9NYW8 714 aaPredicted RBP11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 HEY2Q9UBP5 337 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 CLASP2O75122 1294 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 MFN2O95140 757 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 CHI3L1P36222 383 aaPredicted RBP11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 PHKA2P46019 1235 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 RGS7P49802 495 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 MAPK10P53779 464 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 PGS1Q32NB8 556 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 ARL10Q8N8L6 244 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 URGCPQ8TCY9 931 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 CNKSR1Q969H4 720 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 DHX36Q9H2U1 1008 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 SMARCAD1Q9H4L7 1026 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 RAVER2Q9HCJ3 691 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 TRPC7Q9HCX4 862 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 FARP1Q9Y4F1 1045 aaPredicted RBP11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 ATP6V1G2O95670 118 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 CYP2D6P10635 497 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 GALNTL6Q49A17 601 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 DGKKQ5KSL6 1271 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 USPL1Q5W0Q7 1092 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 OLFML1Q6UWY5 402 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 THUMPD3Q9BV44 507 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 CYLDQ9NQC7 956 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 DYRK4Q9NR20 520 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 TUBE1Q9UJT0 475 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 PLA2R1Q13018 1463 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 PGK2P07205 417 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 ATP6V1B2P21281 511 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 MZF1P28698 734 aaPredicted RBP11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 PFKFB3Q16875 520 aaPredicted RBP11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 TSGA10IPQ3SY00 556 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 TMEM79Q9BSE2 394 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 MXD3Q9BW11 206 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 C3orf70A6NLC5 250 aaPredicted RBP11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 AGRPO00253 132 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 DPYSL4O14531 572 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 CLPTM1O96005 669 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 HMBSP08397 361 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 PHKG2P15735 406 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 PDZK1Q5T2W1 519 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 TBC1D10CQ8IV04 446 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 FAM129AQ9BZQ8 928 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 POLG2Q9UHN1 485 aa11.5□□□□□ -0.57
GTF3C1-201ENST00000356183 PLEKHG2Q9H7P9 1386 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 ATMINO43313 823 aaPredicted RBP11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 IRF1P10914 325 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 PAX7P23759 505 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 ZNF57Q68EA5 555 aaPredicted RBP11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 RCSD1Q6JBY9 416 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 SWSAP1Q6NVH7 229 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 IZUMO2Q6UXV1 221 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 MYCBPAPQ8TBZ2 947 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 FUCA2Q9BTY2 467 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 TRIM39Q9HCM9 518 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 DCDC2Q9UHG0 476 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 USP17L15C9J2P7 530 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 USP17L13C9JLJ4 530 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 USP17L11C9JVI0 530 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 USP17L18D6R9N7 530 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 USP17L22D6RA61 530 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 USP17L17D6RBQ6 530 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 USP17L19D6RCP7 530 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 USP17L20D6RJB6 530 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 PTPN7P35236 360 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 USP17L24Q0WX57 530 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 USP17L6PQ6QN14 398 aa11.49□□□□□ -0.57
GTF3C1-201ENST00000356183 SH3TC2Q8TF17 1288 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms