RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 ADAT2Q7Z6V5 191 aaKnown RBP8.09□□□□□ -1.11
CCR9-201ENST00000355983 NEK8Q86SG6 692 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 RBM15BQ8NDT2 890 aaKnown RBP8.09□□□□□ -1.11
CCR9-201ENST00000355983 PPP1R10Q96QC0 940 aaKnown RBP8.09□□□□□ -1.11
CCR9-201ENST00000355983 TSSK1BQ9BXA7 367 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 FHDC1Q9C0D6 1143 aaPredicted RBP8.09□□□□□ -1.11
CCR9-201ENST00000355983 MRPL46Q9H2W6 279 aaKnown RBP8.09□□□□□ -1.11
CCR9-201ENST00000355983 VPS45Q9NRW7 570 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 BMP2KQ9NSY1 1161 aaPredicted RBP8.09□□□□□ -1.11
CCR9-201ENST00000355983 RRN3Q9NYV6 651 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 PSMC3IPQ9P2W1 217 aaPredicted RBP8.09□□□□□ -1.11
CCR9-201ENST00000355983 COG5Q9UP83 839 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 B3GNT3Q9Y2A9 372 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 NPHP3-ACAD11A0A0J9YXS1 232 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 H0YJX3 145 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 EML1O00423 815 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 LSM1O15116 133 aaKnown RBP8.09□□□□□ -1.11
CCR9-201ENST00000355983 ADAM23O75077 832 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 FAM155BO75949 473 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 FGFR1P11362 822 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 ACTN1P12814 892 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 PHBP35232 272 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 PHKA1P46020 1223 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 NCKAP1LP55160 1127 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 NAA20P61599 178 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 PUM3Q15397 648 aaKnown RBP8.09□□□□□ -1.11
CCR9-201ENST00000355983 PTPROQ16827 1216 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 SNRNP48Q6IEG0 339 aaKnown RBP8.09□□□□□ -1.11
CCR9-201ENST00000355983 PGM2L1Q6PCE3 622 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 FBXL19Q6PCT2 694 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 C3orf67Q6ZVT6 689 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 NLRX1Q86UT6 975 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 ZNF34Q8IZ26 560 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 CCDC89Q8N998 374 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 RIN3Q8TB24 985 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 SH3RF3Q8TEJ3 882 aaPredicted RBP8.09□□□□□ -1.11
CCR9-201ENST00000355983 SREK1Q8WXA9 508 aaKnown RBP8.09□□□□□ -1.11
CCR9-201ENST00000355983 ARHGEF26Q96DR7 871 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 OLFM1Q99784 485 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 GBA3Q9H227 469 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 CCDC68Q9H2F9 335 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 DKK3Q9UBP4 350 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 ASIC3Q9UHC3 531 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 TBK1Q9UHD2 729 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 GNPTGQ9UJJ9 305 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 SNX9Q9Y5X1 595 aa8.09□□□□□ -1.11
CCR9-201ENST00000355983 DNAJA2O60884 412 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 LRRN2O75325 713 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 PARNO95453 639 aaKnown RBP8.08□□□□□ -1.12
CCR9-201ENST00000355983 XRCC5P13010 732 aaKnown RBP8.08□□□□□ -1.12
CCR9-201ENST00000355983 PHKG2P15735 406 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 HMOX2P30519 316 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 MAGEA4P43358 317 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 SPCS2Q15005 226 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 TNIP1Q15025 636 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 TLR1Q15399 786 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 EFHC2Q5JST6 749 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 ARL10Q8N8L6 244 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.08□□□□□ -1.12
CCR9-201ENST00000355983 PRPF31Q8WWY3 499 aaKnown RBP8.08□□□□□ -1.12
CCR9-201ENST00000355983 KRT35Q92764 455 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 LRRC59Q96AG4 307 aaKnown RBP8.08□□□□□ -1.12
CCR9-201ENST00000355983 ANKRD36BP1Q96IX9 119 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 MRPL1Q9BYD6 325 aaKnown RBP8.08□□□□□ -1.12
CCR9-201ENST00000355983 CNOT11Q9UKZ1 510 aaKnown RBP8.08□□□□□ -1.12
CCR9-201ENST00000355983 SOX13Q9UN79 622 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 TDRKHQ9Y2W6 561 aaKnown RBP8.08□□□□□ -1.12
CCR9-201ENST00000355983 PPME1Q9Y570 386 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 TRIM17Q9Y577 477 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 ZNF536O15090 1300 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 MROH5Q6ZUA9 1318 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 KDM3AQ9Y4C1 1321 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 ESYT2A0FGR8 921 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 SPDYE16A6NNV3 312 aaPredicted RBP8.08□□□□□ -1.12
CCR9-201ENST00000355983 PDXKO00764 312 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 MGEA5O60502 916 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 DKC1O60832 514 aaKnown RBP eCLIP8.08□□□□□ -1.12
CCR9-201ENST00000355983 CNOT3O75175 753 aaKnown RBP8.08□□□□□ -1.12
CCR9-201ENST00000355983 AOC1P19801 751 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 ACAT1P24752 427 aaKnown RBP8.08□□□□□ -1.12
CCR9-201ENST00000355983 CPOXP36551 454 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 TECP42680 631 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 SLC1A1P43005 524 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 ARL4CP56559 192 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 GPC5P78333 572 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 HIC1Q14526 733 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 GRM4Q14833 912 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 PKN2Q16513 984 aaKnown RBP8.08□□□□□ -1.12
CCR9-201ENST00000355983 KRT79Q5XKE5 535 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 RNF111Q6ZNA4 994 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 DYMQ7RTS9 669 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 TRIM50Q86XT4 487 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 GLYCTKQ8IVS8 523 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 PEX5LQ8IYB4 626 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 RTKN2Q8IZC4 609 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 ZBTB38Q8NAP3 1195 aaPredicted RBP8.08□□□□□ -1.12
CCR9-201ENST00000355983 DCAF5Q96JK2 942 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 TDRD1Q9BXT4 1180 aaKnown RBP8.08□□□□□ -1.12
CCR9-201ENST00000355983 SLC2A11Q9BYW1 496 aa8.08□□□□□ -1.12
CCR9-201ENST00000355983 INO80BQ9C086 356 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms