RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 AGPSO00116 658 aa14.78□□□□□ -0.04
SREBF1-202ENST00000355815 LPXNO60711 386 aa14.78□□□□□ -0.04
SREBF1-202ENST00000355815 VIL1P09327 827 aaKnown RBP14.78□□□□□ -0.04
SREBF1-202ENST00000355815 CIITAP33076 1130 aa14.78□□□□□ -0.04
SREBF1-202ENST00000355815 ARSEP51690 589 aa14.78□□□□□ -0.04
SREBF1-202ENST00000355815 KCNJ2P63252 427 aa14.78□□□□□ -0.04
SREBF1-202ENST00000355815 EMC2Q15006 297 aa14.78□□□□□ -0.04
SREBF1-202ENST00000355815 THAP11Q96EK4 314 aa14.78□□□□□ -0.04
SREBF1-202ENST00000355815 ANKRD36BP1Q96IX9 119 aa14.78□□□□□ -0.04
SREBF1-202ENST00000355815 AGO4Q9HCK5 861 aaKnown RBP14.78□□□□□ -0.04
SREBF1-202ENST00000355815 HOXC10Q9NYD6 342 aa14.78□□□□□ -0.04
SREBF1-202ENST00000355815 IGSF9BQ9UPX0 1349 aa14.78□□□□□ -0.04
SREBF1-202ENST00000355815 STK10O94804 968 aaKnown RBP14.78□□□□□ -0.04
SREBF1-202ENST00000355815 ITGA8P53708 1063 aa14.78□□□□□ -0.04
SREBF1-202ENST00000355815 ANO4Q32M45 955 aa14.78□□□□□ -0.04
SREBF1-202ENST00000355815 SIAH1Q8IUQ4 282 aa14.78□□□□□ -0.04
SREBF1-202ENST00000355815 TMEM35BQ8NCS4 154 aa14.78□□□□□ -0.04
SREBF1-202ENST00000355815 RBM15Q96T37 977 aaKnown RBP eCLIP14.78□□□□□ -0.043e-7■■■□□ 15.4
SREBF1-202ENST00000355815 MIS12Q9H081 205 aa14.78□□□□□ -0.04
SREBF1-202ENST00000355815 MYH8P13535 1937 aa14.78□□□□□ -0.04
SREBF1-202ENST00000355815 RNF103-CHMP3A0A140T963 221 aa14.78□□□□□ -0.04
SREBF1-202ENST00000355815 CDH16O75309 829 aa14.78□□□□□ -0.04
SREBF1-202ENST00000355815 FSBPO95073 299 aa14.78□□□□□ -0.04
SREBF1-202ENST00000355815 SHBGP04278 402 aa14.78□□□□□ -0.04
SREBF1-202ENST00000355815 ADRB2P07550 413 aa14.78□□□□□ -0.04
SREBF1-202ENST00000355815 TCN1P20061 433 aaPredicted RBP14.78□□□□□ -0.04
SREBF1-202ENST00000355815 RGS7P49802 495 aa14.78□□□□□ -0.04
SREBF1-202ENST00000355815 CNGA3Q16281 694 aa14.78□□□□□ -0.04
SREBF1-202ENST00000355815 P3H1Q32P28 736 aa14.78□□□□□ -0.04
SREBF1-202ENST00000355815 SUPT20HL1Q3ZLR7 823 aa14.78□□□□□ -0.04
SREBF1-202ENST00000355815 ROBO3Q96MS0 1386 aa14.77□□□□□ -0.04
SREBF1-202ENST00000355815 BCL9LQ86UU0 1499 aa14.77□□□□□ -0.04
SREBF1-202ENST00000355815 FOXO6A8MYZ6 492 aa14.77□□□□□ -0.04
SREBF1-202ENST00000355815 GTF2H1P32780 548 aa14.77□□□□□ -0.04
SREBF1-202ENST00000355815 COILP38432 576 aaPredicted RBP14.77□□□□□ -0.04
SREBF1-202ENST00000355815 CLK2P49760 499 aaKnown RBP14.77□□□□□ -0.04
SREBF1-202ENST00000355815 SLC44A4Q53GD3 710 aa14.77□□□□□ -0.04
SREBF1-202ENST00000355815 MFSD4BQ5TF39 518 aa14.77□□□□□ -0.04
SREBF1-202ENST00000355815 ARHGAP18Q8N392 663 aa14.77□□□□□ -0.04
SREBF1-202ENST00000355815 ACTRT1Q8TDG2 376 aa14.77□□□□□ -0.04
SREBF1-202ENST00000355815 HDAC11Q96DB2 347 aa14.77□□□□□ -0.04
SREBF1-202ENST00000355815 TMEM8AQ9HCN3 771 aa14.77□□□□□ -0.04
SREBF1-202ENST00000355815 ADA2Q9NZK5 511 aa14.77□□□□□ -0.04
SREBF1-202ENST00000355815 TSC22D4Q9Y3Q8 395 aa14.77□□□□□ -0.04
SREBF1-202ENST00000355815 EME2A4GXA9 379 aaPredicted RBP14.77□□□□□ -0.05
SREBF1-202ENST00000355815 ADCY3O60266 1144 aa14.77□□□□□ -0.05
SREBF1-202ENST00000355815 MCF2P10911 925 aa14.77□□□□□ -0.05
SREBF1-202ENST00000355815 ZNF844Q08AG5 666 aa14.77□□□□□ -0.05
SREBF1-202ENST00000355815 ZNF667Q5HYK9 610 aa14.77□□□□□ -0.05
SREBF1-202ENST00000355815 CCNYQ8ND76 341 aa14.77□□□□□ -0.05
SREBF1-202ENST00000355815 PSPC1Q8WXF1 523 aaKnown RBP14.77□□□□□ -0.05
SREBF1-202ENST00000355815 OSBPL8Q9BZF1 889 aa14.77□□□□□ -0.05
SREBF1-202ENST00000355815 ELP3Q9H9T3 547 aa14.77□□□□□ -0.05
SREBF1-202ENST00000355815 ASTN2O75129 1339 aaPredicted RBP14.77□□□□□ -0.05
SREBF1-202ENST00000355815 IQANK1A0A1B0GTG1 560 aa14.77□□□□□ -0.05
SREBF1-202ENST00000355815 E2F8A0AVK6 867 aa14.77□□□□□ -0.05
SREBF1-202ENST00000355815 CCDC22O60826 627 aa14.77□□□□□ -0.05
SREBF1-202ENST00000355815 ELF3P78545 371 aaPredicted RBP14.77□□□□□ -0.05
SREBF1-202ENST00000355815 ITGB3BPQ13352 177 aaPredicted RBP14.77□□□□□ -0.05
SREBF1-202ENST00000355815 DHX34Q14147 1143 aaKnown RBP14.77□□□□□ -0.05
SREBF1-202ENST00000355815 SWT1Q5T5J6 900 aaKnown RBP14.77□□□□□ -0.05
SREBF1-202ENST00000355815 RHOT1Q8IXI2 618 aa14.77□□□□□ -0.05
SREBF1-202ENST00000355815 LPAR1Q92633 364 aa14.77□□□□□ -0.05
SREBF1-202ENST00000355815 ATXN7L3BQ96GX2 97 aa14.77□□□□□ -0.05
SREBF1-202ENST00000355815 VPS11Q9H270 941 aa14.77□□□□□ -0.05
SREBF1-202ENST00000355815 NEUROG2Q9H2A3 272 aa14.77□□□□□ -0.05
SREBF1-202ENST00000355815 RPF1Q9H9Y2 349 aaKnown RBP14.77□□□□□ -0.05
SREBF1-202ENST00000355815 ERVK-5Q9HDB9 667 aa14.77□□□□□ -0.05
SREBF1-202ENST00000355815 COL20A1Q9P218 1284 aa14.77□□□□□ -0.05
SREBF1-202ENST00000355815 GOLGB1Q14789 3259 aaKnown RBP14.77□□□□□ -0.05
SREBF1-202ENST00000355815 PARP4Q9UKK3 1724 aaKnown RBP14.77□□□□□ -0.05
SREBF1-202ENST00000355815 CYP3A7-CYP3A51PA0A087WV96 503 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 IGKV6D-41A0A0C4DH26 115 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 FAM47DPA6NHR8 397 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 MCF2LO15068 1137 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 RARAP10276 462 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 CYP3A7P24462 503 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 PGM5Q15124 567 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 ATP13A4Q4VNC1 1196 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 XKR3Q5GH77 459 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 TATDN1Q6P1N9 297 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 DLK2Q6UY11 383 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 AFAP1L2Q8N4X5 818 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 SLC25A41Q8N5S1 370 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 C1orf131Q8NDD1 294 aaKnown RBP14.76□□□□□ -0.05
SREBF1-202ENST00000355815 CDKL2Q92772 493 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 DDX18Q9NVP1 670 aaKnown RBP14.76□□□□□ -0.05
SREBF1-202ENST00000355815 RIPK3Q9Y572 518 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 MYO5AQ9Y4I1 1855 aaKnown RBP14.76□□□□□ -0.05
SREBF1-202ENST00000355815 VHLP40337 213 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 RPL21P46778 160 aaKnown RBP14.76□□□□□ -0.05
SREBF1-202ENST00000355815 KCTD21Q4G0X4 260 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 DNAAF3Q8N9W5 541 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 TRAPPC12Q8WVT3 735 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 DNAI2Q9GZS0 605 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 CCDC90BQ9GZT6 254 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 PABPC3Q9H361 631 aaKnown RBP14.76□□□□□ -0.05
SREBF1-202ENST00000355815 KRT82Q9NSB4 513 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 HESX1Q9UBX0 185 aa14.76□□□□□ -0.05
SREBF1-202ENST00000355815 ARHGAP10A1A4S6 786 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms