RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 SLC4A11Q8NBS3 891 aa27.29■■□□□ 1.96
CLK2-201ENST00000355560 NAP1L3Q99457 506 aaPredicted RBP27.29■■□□□ 1.96
CLK2-201ENST00000355560 SCN1AP35498 2009 aa27.29■■□□□ 1.96
CLK2-201ENST00000355560 ZBTB6Q15916 424 aa27.29■■□□□ 1.96
CLK2-201ENST00000355560 AADACL2Q6P093 401 aa27.29■■□□□ 1.96
CLK2-201ENST00000355560 BEST2Q8NFU1 509 aa27.29■■□□□ 1.96
CLK2-201ENST00000355560 C18orf25Q96B23 403 aaPredicted RBP27.29■■□□□ 1.96
CLK2-201ENST00000355560 ELOVL4Q9GZR5 314 aa27.29■■□□□ 1.96
CLK2-201ENST00000355560 PLEKHA4Q9H4M7 779 aa27.29■■□□□ 1.96
CLK2-201ENST00000355560 PCDHA3Q9Y5H8 950 aa27.29■■□□□ 1.96
CLK2-201ENST00000355560 HTTP42858 3142 aa27.29■■□□□ 1.96
CLK2-201ENST00000355560 PDCD11Q14690 1871 aaKnown RBP27.29■■□□□ 1.96
CLK2-201ENST00000355560 RAD51CO43502 376 aa27.28■■□□□ 1.96
CLK2-201ENST00000355560 HEXIM1O94992 359 aaKnown RBP27.28■■□□□ 1.96
CLK2-201ENST00000355560 CALB1P05937 261 aa27.28■■□□□ 1.96
CLK2-201ENST00000355560 PTPN11Q06124 597 aaPredicted RBP27.28■■□□□ 1.96
CLK2-201ENST00000355560 FAM228AQ86W67 206 aa27.28■■□□□ 1.96
CLK2-201ENST00000355560 WDTC1Q8N5D0 677 aa27.28■■□□□ 1.96
CLK2-201ENST00000355560 TMEM176AQ96HP8 235 aa27.28■■□□□ 1.96
CLK2-201ENST00000355560 DDX47Q9H0S4 455 aaKnown RBP27.28■■□□□ 1.96
CLK2-201ENST00000355560 RNF19AQ9NV58 838 aa27.28■■□□□ 1.96
CLK2-201ENST00000355560 PARVAQ9NVD7 372 aa27.28■■□□□ 1.96
CLK2-201ENST00000355560 FAM53CQ9NYF3 392 aa27.28■■□□□ 1.96
CLK2-201ENST00000355560 CDY2AQ9Y6F7 541 aa27.28■■□□□ 1.96
CLK2-201ENST00000355560 ASGR1P07306 291 aa27.28■■□□□ 1.96
CLK2-201ENST00000355560 GLI1P08151 1106 aa27.28■■□□□ 1.96
CLK2-201ENST00000355560 REM2Q8IYK8 340 aaPredicted RBP27.28■■□□□ 1.96
CLK2-201ENST00000355560 PPEF2O14830 753 aa27.27■■□□□ 1.96
CLK2-201ENST00000355560 INCA1Q0VD86 236 aa27.27■■□□□ 1.96
CLK2-201ENST00000355560 SEL1L2Q5TEA6 688 aa27.27■■□□□ 1.96
CLK2-201ENST00000355560 DENND1BQ6P3S1 775 aa27.27■■□□□ 1.96
CLK2-201ENST00000355560 WNT8BQ93098 351 aa27.27■■□□□ 1.96
CLK2-201ENST00000355560 KLK14Q9P0G3 267 aa27.27■■□□□ 1.96
CLK2-201ENST00000355560 PARP2Q9UGN5 583 aa27.27■■□□□ 1.96
CLK2-201ENST00000355560 BARX2Q9UMQ3 279 aaPredicted RBP27.27■■□□□ 1.96
CLK2-201ENST00000355560 SART1O43290 800 aaKnown RBP27.26■■□□□ 1.96
CLK2-201ENST00000355560 SLC1A1P43005 524 aa27.26■■□□□ 1.96
CLK2-201ENST00000355560 CLUL1Q15846 466 aa27.26■■□□□ 1.96
CLK2-201ENST00000355560 TWF2Q6IBS0 349 aaKnown RBP27.26■■□□□ 1.96
CLK2-201ENST00000355560 HDXQ7Z353 690 aa27.26■■□□□ 1.96
CLK2-201ENST00000355560 ADAT2Q7Z6V5 191 aaKnown RBP27.26■■□□□ 1.96
CLK2-201ENST00000355560 RSPH3Q86UC2 560 aa27.26■■□□□ 1.96
CLK2-201ENST00000355560 RNF39Q9H2S5 420 aa27.26■■□□□ 1.96
CLK2-201ENST00000355560 UBQLN1Q9UMX0 589 aaKnown RBP27.26■■□□□ 1.96
CLK2-201ENST00000355560 IPPQ9Y573 584 aa27.26■■□□□ 1.96
CLK2-201ENST00000355560 TRPV2Q9Y5S1 764 aa27.26■■□□□ 1.96
CLK2-201ENST00000355560 ZSCAN5CA6NGD5 496 aaPredicted RBP27.26■■□□□ 1.95
CLK2-201ENST00000355560 TLR3O15455 904 aaKnown RBP27.26■■□□□ 1.95
CLK2-201ENST00000355560 GJB6O95452 261 aa27.26■■□□□ 1.95
CLK2-201ENST00000355560 RWDD2BP57060 319 aa27.26■■□□□ 1.95
CLK2-201ENST00000355560 KCNA10Q16322 511 aa27.26■■□□□ 1.95
CLK2-201ENST00000355560 ERICH1Q86X53 443 aa27.26■■□□□ 1.95
CLK2-201ENST00000355560 LHX5Q9H2C1 402 aa27.26■■□□□ 1.95
CLK2-201ENST00000355560 MAP2K7O14733 419 aa27.25■■□□□ 1.95
CLK2-201ENST00000355560 PROSCO94903 275 aa27.25■■□□□ 1.95
CLK2-201ENST00000355560 CTSHP09668 335 aa27.25■■□□□ 1.95
CLK2-201ENST00000355560 PYGMP11217 842 aa27.25■■□□□ 1.95
CLK2-201ENST00000355560 NDST1P52848 882 aa27.25■■□□□ 1.95
CLK2-201ENST00000355560 GUCY2DQ02846 1103 aa27.25■■□□□ 1.95
CLK2-201ENST00000355560 SERINC5Q86VE9 423 aa27.25■■□□□ 1.95
CLK2-201ENST00000355560 KRT222Q8N1A0 295 aa27.25■■□□□ 1.95
CLK2-201ENST00000355560 FAM124BQ9H5Z6 455 aaPredicted RBP27.25■■□□□ 1.95
CLK2-201ENST00000355560 NR2E1Q9Y466 385 aa27.25■■□□□ 1.95
CLK2-201ENST00000355560 SNX9Q9Y5X1 595 aa27.25■■□□□ 1.95
CLK2-201ENST00000355560 FEZF2Q8TBJ5 459 aa27.25■■□□□ 1.95
CLK2-201ENST00000355560 GOLGA6L10A0A0M3HER8 536 aa27.24■■□□□ 1.95
CLK2-201ENST00000355560 SMIM28A0A1B0GU29 152 aa27.24■■□□□ 1.95
CLK2-201ENST00000355560 TRPA1O75762 1119 aa27.24■■□□□ 1.95
CLK2-201ENST00000355560 TNFRSF8P28908 595 aa27.24■■□□□ 1.95
CLK2-201ENST00000355560 CASP8Q14790 479 aa27.24■■□□□ 1.95
CLK2-201ENST00000355560 IFT20Q8IY31 132 aa27.24■■□□□ 1.95
CLK2-201ENST00000355560 TTC39CQ8N584 583 aa27.24■■□□□ 1.95
CLK2-201ENST00000355560 LRRC52Q8N7C0 313 aa27.24■■□□□ 1.95
CLK2-201ENST00000355560 SMG8Q8ND04 991 aaKnown RBP27.24■■□□□ 1.95
CLK2-201ENST00000355560 KLHDC9Q8NEP7 349 aa27.24■■□□□ 1.95
CLK2-201ENST00000355560 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.24■■□□□ 1.95
CLK2-201ENST00000355560 EPB41L5Q9HCM4 733 aa27.24■■□□□ 1.95
CLK2-201ENST00000355560 GDF3Q9NR23 364 aa27.24■■□□□ 1.95
CLK2-201ENST00000355560 SRRDQ9UH36 339 aa27.24■■□□□ 1.95
CLK2-201ENST00000355560 BRCA2P51587 3418 aa27.24■■□□□ 1.95
CLK2-201ENST00000355560 ESYT3A0FGR9 886 aa27.23■■□□□ 1.95
CLK2-201ENST00000355560 RPL7AP62424 266 aaKnown RBP27.23■■□□□ 1.95
CLK2-201ENST00000355560 DAB2IPQ5VWQ8 1189 aa27.23■■□□□ 1.95
CLK2-201ENST00000355560 C9orf57Q5W0N0 161 aa27.23■■□□□ 1.95
CLK2-201ENST00000355560 DNAJC24Q6P3W2 148 aa27.23■■□□□ 1.95
CLK2-201ENST00000355560 HEXIM2Q96MH2 286 aaKnown RBP27.23■■□□□ 1.95
CLK2-201ENST00000355560 THSD7BQ9C0I4 1608 aa27.23■■□□□ 1.95
CLK2-201ENST00000355560 SLITRK6Q9H5Y7 841 aa27.23■■□□□ 1.95
CLK2-201ENST00000355560 TCRBV5S1A1TA0A578 114 aa27.23■■□□□ 1.95
CLK2-201ENST00000355560 TNNT3P45378 269 aaPredicted RBP27.23■■□□□ 1.95
CLK2-201ENST00000355560 CBX1P83916 185 aa27.23■■□□□ 1.95
CLK2-201ENST00000355560 PTPN20Q4JDL3 420 aa27.23■■□□□ 1.95
CLK2-201ENST00000355560 CYP4A22Q5TCH4 519 aa27.23■■□□□ 1.95
CLK2-201ENST00000355560 CD99L2Q8TCZ2 262 aa27.23■■□□□ 1.95
CLK2-201ENST00000355560 GDAP1L1Q96MZ0 367 aa27.23■■□□□ 1.95
CLK2-201ENST00000355560 ERVK-5Q9HDB9 667 aa27.23■■□□□ 1.95
CLK2-201ENST00000355560 CREBZFQ9NS37 354 aa27.23■■□□□ 1.95
CLK2-201ENST00000355560 AMACRQ9UHK6 382 aa27.23■■□□□ 1.95
CLK2-201ENST00000355560 CYTH4Q9UIA0 394 aa27.23■■□□□ 1.95
CLK2-201ENST00000355560 WDR3Q9UNX4 943 aaKnown RBP eCLIP27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms