RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 MED21Q13503 144 aa18.84■□□□□ 0.61
COL18A1-202ENST00000355480 ARMC6Q6NXE6 501 aa18.84■□□□□ 0.61
COL18A1-202ENST00000355480 ARHGAP18Q8N392 663 aa18.84■□□□□ 0.61
COL18A1-202ENST00000355480 IRX2Q9BZI1 471 aaPredicted RBP18.84■□□□□ 0.61
COL18A1-202ENST00000355480 PSD3Q9NYI0 1048 aa18.84■□□□□ 0.61
COL18A1-202ENST00000355480 MARCOQ9UEW3 520 aaPredicted RBP18.84■□□□□ 0.61
COL18A1-202ENST00000355480 CDH16O75309 829 aa18.84■□□□□ 0.61
COL18A1-202ENST00000355480 AARS2Q5JTZ9 985 aaKnown RBP18.84■□□□□ 0.61
COL18A1-202ENST00000355480 RABGAP1LQ5R372 815 aa18.84■□□□□ 0.61
COL18A1-202ENST00000355480 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.84■□□□□ 0.614e-6■■■■■ 32.5
COL18A1-202ENST00000355480 BHMTQ93088 406 aa18.84■□□□□ 0.61
COL18A1-202ENST00000355480 SPATA16Q9BXB7 569 aa18.84■□□□□ 0.61
COL18A1-202ENST00000355480 RGS2P41220 211 aa18.83■□□□□ 0.61
COL18A1-202ENST00000355480 SERPINB4P48594 390 aa18.83■□□□□ 0.61
COL18A1-202ENST00000355480 FXR2P51116 673 aaKnown RBP eCLIP18.83■□□□□ 0.614e-7■■■■□ 23.8
COL18A1-202ENST00000355480 PTK7Q13308 1070 aa18.83■□□□□ 0.61
COL18A1-202ENST00000355480 CDH18Q13634 790 aa18.83■□□□□ 0.61
COL18A1-202ENST00000355480 RDM1Q8NG50 284 aa18.83■□□□□ 0.61
COL18A1-202ENST00000355480 ZFYVE19Q96K21 471 aa18.83■□□□□ 0.61
COL18A1-202ENST00000355480 MKNK1Q9BUB5 465 aa18.83■□□□□ 0.61
COL18A1-202ENST00000355480 SENP2Q9HC62 589 aa18.83■□□□□ 0.61
COL18A1-202ENST00000355480 H0Y626 953 aa18.83■□□□□ 0.61
COL18A1-202ENST00000355480 UBE2Q2LH0YL09 131 aa18.83■□□□□ 0.61
COL18A1-202ENST00000355480 MAGEA9P43362 315 aa18.83■□□□□ 0.61
COL18A1-202ENST00000355480 VSNL1P62760 191 aa18.83■□□□□ 0.61
COL18A1-202ENST00000355480 KIRREL3Q8IZU9 778 aa18.83■□□□□ 0.61
COL18A1-202ENST00000355480 RUBCNQ92622 972 aa18.83■□□□□ 0.61
COL18A1-202ENST00000355480 KIF2CQ99661 725 aa18.83■□□□□ 0.61
COL18A1-202ENST00000355480 COLEC11Q9BWP8 271 aa18.83■□□□□ 0.61
COL18A1-202ENST00000355480 UBQLN1Q9UMX0 589 aaKnown RBP18.83■□□□□ 0.61
COL18A1-202ENST00000355480 TRAF3IP3Q9Y228 551 aa18.83■□□□□ 0.61
COL18A1-202ENST00000355480 ADGRA2Q96PE1 1338 aa18.83■□□□□ 0.61
COL18A1-202ENST00000355480 CHRM3P20309 590 aa18.83■□□□□ 0.6
COL18A1-202ENST00000355480 RAD23BP54727 409 aa18.83■□□□□ 0.6
COL18A1-202ENST00000355480 DPP3Q9NY33 737 aa18.83■□□□□ 0.6
COL18A1-202ENST00000355480 SEC24DO94855 1032 aaPredicted RBP18.83■□□□□ 0.6
COL18A1-202ENST00000355480 ZNF677Q86XU0 584 aa18.83■□□□□ 0.6
COL18A1-202ENST00000355480 TMEM169Q96HH4 297 aa18.83■□□□□ 0.6
COL18A1-202ENST00000355480 PITPNM2Q9BZ72 1349 aa18.83■□□□□ 0.6
COL18A1-202ENST00000355480 STAG3L1P0CL83 205 aa18.82■□□□□ 0.6
COL18A1-202ENST00000355480 GLRA4Q5JXX5 417 aa18.82■□□□□ 0.6
COL18A1-202ENST00000355480 CINPQ9BW66 212 aaPredicted RBP18.82■□□□□ 0.6
COL18A1-202ENST00000355480 MRPL1Q9BYD6 325 aaKnown RBP18.82■□□□□ 0.6
COL18A1-202ENST00000355480 NPHS2Q9NP85 383 aa18.82■□□□□ 0.6
COL18A1-202ENST00000355480 P4HA2O15460 535 aa18.82■□□□□ 0.6
COL18A1-202ENST00000355480 MAPRE1Q15691 268 aaKnown RBP18.82■□□□□ 0.6
COL18A1-202ENST00000355480 AMHR2Q16671 573 aa18.82■□□□□ 0.6
COL18A1-202ENST00000355480 USP49Q70CQ1 688 aa18.82■□□□□ 0.6
COL18A1-202ENST00000355480 MAP3K14Q99558 947 aa18.82■□□□□ 0.6
COL18A1-202ENST00000355480 FAM129AQ9BZQ8 928 aa18.82■□□□□ 0.6
COL18A1-202ENST00000355480 ZCWPW1Q9H0M4 648 aa18.82■□□□□ 0.6
COL18A1-202ENST00000355480 TBX20Q9UMR3 447 aa18.82■□□□□ 0.6
COL18A1-202ENST00000355480 FXR1P51114 621 aaKnown RBP eCLIP18.82■□□□□ 0.6
COL18A1-202ENST00000355480 TJAP1Q5JTD0 557 aa18.82■□□□□ 0.6
COL18A1-202ENST00000355480 FEZF2Q8TBJ5 459 aa18.82■□□□□ 0.6
COL18A1-202ENST00000355480 GGT7Q9UJ14 662 aa18.82■□□□□ 0.6
COL18A1-202ENST00000355480 DBR1Q9UK59 544 aaKnown RBP18.82■□□□□ 0.6
COL18A1-202ENST00000355480 ICAM1P05362 532 aa18.82■□□□□ 0.6
COL18A1-202ENST00000355480 ENO3P13929 434 aaPredicted RBP18.82■□□□□ 0.6
COL18A1-202ENST00000355480 CCDC15Q0P6D6 951 aa18.82■□□□□ 0.6
COL18A1-202ENST00000355480 CNPY4Q8N129 248 aa18.82■□□□□ 0.6
COL18A1-202ENST00000355480 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.82■□□□□ 0.6
COL18A1-202ENST00000355480 MED14O60244 1454 aa18.82■□□□□ 0.6
COL18A1-202ENST00000355480 CFAP73A6NFT4 308 aa18.82■□□□□ 0.6
COL18A1-202ENST00000355480 TMEM253P0C7T8 217 aa18.82■□□□□ 0.6
COL18A1-202ENST00000355480 ERFP50548 548 aa18.82■□□□□ 0.6
COL18A1-202ENST00000355480 ATP6V0D2Q8N8Y2 350 aa18.82■□□□□ 0.6
COL18A1-202ENST00000355480 RBP3P10745 1247 aa18.81■□□□□ 0.6
COL18A1-202ENST00000355480 EPHB2P29323 1055 aa18.81■□□□□ 0.6
COL18A1-202ENST00000355480 CRLS1Q9UJA2 301 aa18.81■□□□□ 0.6
COL18A1-202ENST00000355480 CNTNAP4Q9C0A0 1308 aa18.81■□□□□ 0.6
COL18A1-202ENST00000355480 PTGER2P43116 358 aa18.81■□□□□ 0.6
COL18A1-202ENST00000355480 MTM1Q13496 603 aa18.81■□□□□ 0.6
COL18A1-202ENST00000355480 NAA30Q147X3 362 aaPredicted RBP18.81■□□□□ 0.6
COL18A1-202ENST00000355480 SGO1Q5FBB7 561 aa18.81■□□□□ 0.6
COL18A1-202ENST00000355480 BARGINQ6ZT62 677 aa18.81■□□□□ 0.6
COL18A1-202ENST00000355480 C3orf62Q6ZUJ4 267 aa18.81■□□□□ 0.6
COL18A1-202ENST00000355480 KCTD17Q8N5Z5 321 aa18.81■□□□□ 0.6
COL18A1-202ENST00000355480 ADNPQ9H2P0 1102 aa18.81■□□□□ 0.6
COL18A1-202ENST00000355480 ZCCHC17Q9NP64 241 aaKnown RBP18.81■□□□□ 0.6
COL18A1-202ENST00000355480 FBXO28Q9NVF7 368 aa18.81■□□□□ 0.6
COL18A1-202ENST00000355480 TRIM10Q9UDY6 481 aa18.81■□□□□ 0.6
COL18A1-202ENST00000355480 RSPH10B2B2RC85 870 aa18.81■□□□□ 0.6
COL18A1-202ENST00000355480 MTSS1O43312 755 aa18.81■□□□□ 0.6
COL18A1-202ENST00000355480 RSPH10BP0C881 870 aa18.81■□□□□ 0.6
COL18A1-202ENST00000355480 PTK6Q13882 451 aa18.81■□□□□ 0.6
COL18A1-202ENST00000355480 NAPEPLDQ6IQ20 393 aa18.81■□□□□ 0.6
COL18A1-202ENST00000355480 RANBP17Q9H2T7 1088 aaKnown RBP18.81■□□□□ 0.6
COL18A1-202ENST00000355480 ARL2BPQ9Y2Y0 163 aa18.81■□□□□ 0.6
COL18A1-202ENST00000355480 MYO1GB0I1T2 1018 aa18.81■□□□□ 0.6
COL18A1-202ENST00000355480 FKBP9O95302 570 aa18.81■□□□□ 0.6
COL18A1-202ENST00000355480 FKBP9P1Q75LS8 142 aa18.81■□□□□ 0.6
COL18A1-202ENST00000355480 IFNEQ86WN2 208 aa18.81■□□□□ 0.6
COL18A1-202ENST00000355480 MYO1CO00159 1063 aa18.81■□□□□ 0.6
COL18A1-202ENST00000355480 GAS2O43903 313 aaKnown RBP18.81■□□□□ 0.6
COL18A1-202ENST00000355480 RHOBTB1O94844 696 aa18.81■□□□□ 0.6
COL18A1-202ENST00000355480 CHN1P15882 459 aa18.81■□□□□ 0.6
COL18A1-202ENST00000355480 NR1I3Q14994 352 aa18.81■□□□□ 0.6
COL18A1-202ENST00000355480 C1orf131Q8NDD1 294 aaKnown RBP18.81■□□□□ 0.6
COL18A1-202ENST00000355480 HEATR9A2RTY3 570 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms