RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 PARVAQ9NVD7 372 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.31■□□□□ 0.52
VPS13B-201ENST00000355155 ADAM22Q9P0K1 906 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 PIN4Q9Y237 131 aaKnown RBP18.31■□□□□ 0.52
VPS13B-201ENST00000355155 SRCAPQ6ZRS2 3230 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 MOXD2PA6NHM9 499 aa18.3■□□□□ 0.52
VPS13B-201ENST00000355155 ERLIN1O75477 346 aa18.3■□□□□ 0.52
VPS13B-201ENST00000355155 PROSCO94903 275 aa18.3■□□□□ 0.52
VPS13B-201ENST00000355155 PGK1P00558 417 aa18.3■□□□□ 0.52
VPS13B-201ENST00000355155 VSNL1P62760 191 aa18.3■□□□□ 0.52
VPS13B-201ENST00000355155 TNNC1P63316 161 aa18.3■□□□□ 0.52
VPS13B-201ENST00000355155 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.3■□□□□ 0.52
VPS13B-201ENST00000355155 NXF3Q9H4D5 531 aaKnown RBP18.3■□□□□ 0.52
VPS13B-201ENST00000355155 SLITRK6Q9H5Y7 841 aa18.3■□□□□ 0.52
VPS13B-201ENST00000355155 GDF3Q9NR23 364 aa18.3■□□□□ 0.52
VPS13B-201ENST00000355155 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.3■□□□□ 0.52
VPS13B-201ENST00000355155 IPPQ9Y573 584 aa18.3■□□□□ 0.52
VPS13B-201ENST00000355155 M0QZ92 97 aa18.3■□□□□ 0.52
VPS13B-201ENST00000355155 CHRNA1P02708 482 aa18.3■□□□□ 0.52
VPS13B-201ENST00000355155 DSC3Q14574 896 aa18.3■□□□□ 0.52
VPS13B-201ENST00000355155 ALG3Q92685 438 aa18.3■□□□□ 0.52
VPS13B-201ENST00000355155 STRIP2Q9ULQ0 834 aa18.3■□□□□ 0.52
VPS13B-201ENST00000355155 MAP2K7O14733 419 aa18.29■□□□□ 0.52
VPS13B-201ENST00000355155 INPPL1O15357 1258 aa18.29■□□□□ 0.52
VPS13B-201ENST00000355155 BRD2P25440 801 aaKnown RBP18.29■□□□□ 0.52
VPS13B-201ENST00000355155 ARFGAP3Q9NP61 516 aa18.29■□□□□ 0.52
VPS13B-201ENST00000355155 WDR35Q9P2L0 1181 aa18.29■□□□□ 0.52
VPS13B-201ENST00000355155 SMIM28A0A1B0GU29 152 aa18.29■□□□□ 0.52
VPS13B-201ENST00000355155 ZNF623O75123 536 aa18.29■□□□□ 0.52
VPS13B-201ENST00000355155 KRT19P08727 400 aa18.29■□□□□ 0.52
VPS13B-201ENST00000355155 CYP1B1Q16678 543 aa18.29■□□□□ 0.52
VPS13B-201ENST00000355155 CCNI2Q6ZMN8 369 aaPredicted RBP18.29■□□□□ 0.52
VPS13B-201ENST00000355155 FEZF2Q8TBJ5 459 aa18.29■□□□□ 0.52
VPS13B-201ENST00000355155 FNIP1Q8TF40 1166 aa18.29■□□□□ 0.52
VPS13B-201ENST00000355155 SEC14L1Q92503 715 aa18.29■□□□□ 0.52
VPS13B-201ENST00000355155 WNT8BQ93098 351 aa18.29■□□□□ 0.52
VPS13B-201ENST00000355155 PPP1R10Q96QC0 940 aaKnown RBP18.29■□□□□ 0.52
VPS13B-201ENST00000355155 EHD2Q9NZN4 543 aa18.29■□□□□ 0.52
VPS13B-201ENST00000355155 L1RE1Q9UN81 338 aa18.29■□□□□ 0.52
VPS13B-201ENST00000355155 A0A0U1RQG5 324 aaPredicted RBP18.28■□□□□ 0.52
VPS13B-201ENST00000355155 TMEM191CA6NGB0 347 aa18.28■□□□□ 0.52
VPS13B-201ENST00000355155 ATMINO43313 823 aaPredicted RBP18.28■□□□□ 0.52
VPS13B-201ENST00000355155 PSTPIP1O43586 416 aa18.28■□□□□ 0.52
VPS13B-201ENST00000355155 ATF7P17544 494 aaPredicted RBP18.28■□□□□ 0.52
VPS13B-201ENST00000355155 PKDCCQ504Y2 493 aa18.28■□□□□ 0.52
VPS13B-201ENST00000355155 ARHGAP17Q68EM7 881 aa18.28■□□□□ 0.52
VPS13B-201ENST00000355155 LCLAT1Q6UWP7 414 aa18.28■□□□□ 0.52
VPS13B-201ENST00000355155 C3orf20Q8ND61 904 aa18.28■□□□□ 0.52
VPS13B-201ENST00000355155 SLAIN1Q8ND83 568 aa18.28■□□□□ 0.52
VPS13B-201ENST00000355155 LRRC1Q9BTT6 524 aa18.28■□□□□ 0.52
VPS13B-201ENST00000355155 CXCL16Q9H2A7 254 aa18.28■□□□□ 0.52
VPS13B-201ENST00000355155 CEP83Q9Y592 693 aa18.28■□□□□ 0.52
VPS13B-201ENST00000355155 SCN1AP35498 2009 aa18.28■□□□□ 0.52
VPS13B-201ENST00000355155 O00370 1275 aa18.28■□□□□ 0.52
VPS13B-201ENST00000355155 CEP104O60308 925 aa18.28■□□□□ 0.52
VPS13B-201ENST00000355155 RHOXF2BP0C7M4 288 aa18.28■□□□□ 0.52
VPS13B-201ENST00000355155 CD58P19256 250 aa18.28■□□□□ 0.52
VPS13B-201ENST00000355155 LRRC38Q5VT99 294 aa18.28■□□□□ 0.52
VPS13B-201ENST00000355155 DPH6Q7L8W6 267 aa18.28■□□□□ 0.52
VPS13B-201ENST00000355155 CD99L2Q8TCZ2 262 aa18.28■□□□□ 0.52
VPS13B-201ENST00000355155 ZNF560Q96MR9 790 aa18.28■□□□□ 0.52
VPS13B-201ENST00000355155 TWNKQ96RR1 684 aa18.28■□□□□ 0.52
VPS13B-201ENST00000355155 PSMB7Q99436 277 aa18.28■□□□□ 0.52
VPS13B-201ENST00000355155 RHOXF2Q9BQY4 288 aa18.28■□□□□ 0.52
VPS13B-201ENST00000355155 NXF1Q9UBU9 619 aaKnown RBP18.28■□□□□ 0.52
VPS13B-201ENST00000355155 GPR182O15218 404 aa18.27■□□□□ 0.52
VPS13B-201ENST00000355155 SETSIPP0DME0 302 aa18.27■□□□□ 0.52
VPS13B-201ENST00000355155 PAX3P23760 479 aa18.27■□□□□ 0.52
VPS13B-201ENST00000355155 RPL34P49207 117 aaKnown RBP18.27■□□□□ 0.52
VPS13B-201ENST00000355155 MESDQ14696 234 aa18.27■□□□□ 0.52
VPS13B-201ENST00000355155 ARHGEF6Q15052 776 aa18.27■□□□□ 0.52
VPS13B-201ENST00000355155 PAXIP1Q6ZW49 1069 aaPredicted RBP18.27■□□□□ 0.52
VPS13B-201ENST00000355155 RNF180Q86T96 592 aa18.27■□□□□ 0.52
VPS13B-201ENST00000355155 C12orf50Q8NA57 414 aaPredicted RBP18.27■□□□□ 0.52
VPS13B-201ENST00000355155 RNPC3Q96LT9 517 aaKnown RBP18.27■□□□□ 0.52
VPS13B-201ENST00000355155 UBXN6Q9BZV1 441 aa18.27■□□□□ 0.52
VPS13B-201ENST00000355155 SMARCAL1Q9NZC9 954 aa18.27■□□□□ 0.52
VPS13B-201ENST00000355155 STIM2Q9P246 746 aa18.27■□□□□ 0.52
VPS13B-201ENST00000355155 TUBGCP4Q9UGJ1 667 aa18.27■□□□□ 0.52
VPS13B-201ENST00000355155 ZNF268Q14587 947 aaPredicted RBP18.27■□□□□ 0.52
VPS13B-201ENST00000355155 DENND1BQ6P3S1 775 aa18.27■□□□□ 0.52
VPS13B-201ENST00000355155 MMS22LQ6ZRQ5 1243 aa18.27■□□□□ 0.52
VPS13B-201ENST00000355155 FUT8Q9BYC5 575 aa18.27■□□□□ 0.52
VPS13B-201ENST00000355155 TRIM6Q9C030 488 aaPredicted RBP18.27■□□□□ 0.52
VPS13B-201ENST00000355155 IP6K2Q9UHH9 426 aa18.27■□□□□ 0.52
VPS13B-201ENST00000355155 ANAPC7Q9UJX3 599 aa18.27■□□□□ 0.52
VPS13B-201ENST00000355155 GIT1Q9Y2X7 761 aa18.27■□□□□ 0.52
VPS13B-201ENST00000355155 TLR3O15455 904 aaKnown RBP18.27■□□□□ 0.51
VPS13B-201ENST00000355155 ECM2O94769 699 aaPredicted RBP18.27■□□□□ 0.51
VPS13B-201ENST00000355155 RAP1GAPP47736 663 aa18.27■□□□□ 0.51
VPS13B-201ENST00000355155 RAB27AP51159 221 aa18.27■□□□□ 0.51
VPS13B-201ENST00000355155 MAP9Q49MG5 647 aa18.27■□□□□ 0.51
VPS13B-201ENST00000355155 SCARA5Q6ZMJ2 495 aa18.27■□□□□ 0.51
VPS13B-201ENST00000355155 C11orf70Q9BRQ4 267 aa18.27■□□□□ 0.51
VPS13B-201ENST00000355155 ST3GAL5Q9UNP4 418 aa18.27■□□□□ 0.51
VPS13B-201ENST00000355155 GUCY2FP51841 1108 aa18.26■□□□□ 0.51
VPS13B-201ENST00000355155 CDH8P55286 799 aa18.26■□□□□ 0.51
VPS13B-201ENST00000355155 LONRF2Q1L5Z9 754 aa18.26■□□□□ 0.51
VPS13B-201ENST00000355155 FBXO47Q5MNV8 452 aa18.26■□□□□ 0.51
VPS13B-201ENST00000355155 LHX8Q68G74 356 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms