RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 CYB561D2O14569 222 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 NFICP08651 508 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 PRKAR2AP13861 404 aaKnown RBP13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 EIF4BP23588 611 aaKnown RBP13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 DAB2IPQ5VWQ8 1189 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 RPAINQ86UA6 219 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 ANKMY2Q8IV38 441 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 MCUQ8NE86 351 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 FEZF2Q8TBJ5 459 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 WHAMMQ8TF30 809 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 PGBD4Q96DM1 585 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 TMEM106CQ9BVX2 250 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 WDR70Q9NW82 654 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 PODXLO00592 558 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 OPLAHO14841 1288 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 MYBL1P10243 752 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 NCAM1P13591 858 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 EIF3EP60228 445 aaKnown RBP13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 SP3Q02447 781 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 KYAT1Q16773 422 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 EFHC2Q5JST6 749 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 FAXCQ5TGI0 409 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 RAPH1Q70E73 1250 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 ARHGEF26Q96DR7 871 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 SCYL1Q96KG9 808 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 PGLYRP2Q96PD5 576 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 GOLGA8KD6RF30 607 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 CLGNO14967 610 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 THP07101 528 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 NDST1P52848 882 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 IZUMO3Q5VZ72 239 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 HEATR6Q6AI08 1181 aaKnown RBP13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 PID1Q7Z2X4 250 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 PACS2Q86VP3 889 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 SRRM1Q8IYB3 904 aaKnown RBP13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 ZBED8Q8IZ13 594 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 RILPQ96NA2 401 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 GPR20Q99678 358 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 CASZ1Q86V15 1759 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 DNAJB2P25686 324 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 CHRNA3P32297 505 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 PEX19P40855 299 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 MSH2P43246 934 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 PTPN11Q06124 597 aaPredicted RBP13□□□□□ -0.33
PCDHB11-201ENST00000354757 SV2CQ496J9 727 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 BEND6Q5SZJ8 279 aaPredicted RBP13□□□□□ -0.33
PCDHB11-201ENST00000354757 WDR49Q8IV35 697 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 BRSK2Q8IWQ3 736 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 SH2D3CQ8N5H7 860 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 CDT1Q9H211 546 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 DUOX1Q9NRD9 1551 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 TYW5A2RUC4 315 aaKnown RBP13□□□□□ -0.33
PCDHB11-201ENST00000354757 GRID2IPA4D2P6 1211 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 APRTP07741 180 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 SMIM10L2AP0DMW4 78 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 SMIM10L2BP0DMW5 78 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 MAPTP10636 758 aaKnown RBP13□□□□□ -0.33
PCDHB11-201ENST00000354757 ZNF131P52739 623 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 FBXO47Q5MNV8 452 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 LLGL2Q6P1M3 1020 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 CENPUQ71F23 418 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 FAM131BQ86XD5 332 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 MIB1Q86YT6 1006 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 SKA2Q8WVK7 121 aaPredicted RBP13□□□□□ -0.33
PCDHB11-201ENST00000354757 LPPQ93052 612 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 ATP2A3Q93084 1043 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 ZNF512Q96ME7 567 aaPredicted RBP13□□□□□ -0.33
PCDHB11-201ENST00000354757 STAU2Q9NUL3 570 aaKnown RBP eCLIP13□□□□□ -0.33
PCDHB11-201ENST00000354757 NHSL1Q5SYE7 1610 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 TULP2O00295 520 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 TRAPPC3O43617 180 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 AP1G2O75843 785 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 CA4P22748 312 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 SP2Q02086 613 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 SLC20A2Q08357 652 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 PDIA2Q13087 525 aaKnown RBP13□□□□□ -0.33
PCDHB11-201ENST00000354757 CUL1Q13616 776 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 ZPBP2Q6X784 338 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 PCSK9Q8NBP7 692 aaKnown RBP13□□□□□ -0.33
PCDHB11-201ENST00000354757 MTG1Q9BT17 334 aaPredicted RBP13□□□□□ -0.33
PCDHB11-201ENST00000354757 ITGB4P16144 1822 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 NID2Q14112 1375 aa13□□□□□ -0.33
PCDHB11-201ENST00000354757 SESN2P58004 480 aaPredicted RBP12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 ZNF200P98182 395 aaPredicted RBP12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 ACTN3Q08043 901 aaPredicted RBP12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 CCL14Q16627 93 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 FAM110CQ1W6H9 321 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 SLC27A1Q6PCB7 646 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 LRRC15Q8TF66 581 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 SOCS4Q8WXH5 440 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 ATXN7L3BQ96GX2 97 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 DFFAO00273 331 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 GPR182O15218 404 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 KCNN4O15554 427 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 MAFO75444 373 aaPredicted RBP12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 RBP3P10745 1247 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 ALDH3A1P30838 453 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 PTGISQ16647 500 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 DCAF4L1Q3SXM0 396 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms