RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 PMS1P54277 932 aaKnown RBP23.75■■□□□ 1.39
SNX3-202ENST00000349379 ADCY1Q08828 1119 aa23.75■■□□□ 1.39
SNX3-202ENST00000349379 DPH6Q7L8W6 267 aa23.75■■□□□ 1.39
SNX3-202ENST00000349379 TMEM86AQ8N2M4 240 aa23.75■■□□□ 1.39
SNX3-202ENST00000349379 ZCWPW1Q9H0M4 648 aa23.75■■□□□ 1.39
SNX3-202ENST00000349379 XYLT2Q9H1B5 865 aa23.75■■□□□ 1.39
SNX3-202ENST00000349379 VRTNQ9H8Y1 702 aa23.75■■□□□ 1.39
SNX3-202ENST00000349379 CYP4F11Q9HBI6 524 aa23.75■■□□□ 1.39
SNX3-202ENST00000349379 LMBRD1Q9NUN5 540 aa23.75■■□□□ 1.39
SNX3-202ENST00000349379 C2CD4DB7Z1M9 353 aa23.74■■□□□ 1.39
SNX3-202ENST00000349379 GABRDO14764 452 aa23.74■■□□□ 1.39
SNX3-202ENST00000349379 IKBKBO14920 756 aa23.74■■□□□ 1.39
SNX3-202ENST00000349379 CCL16O15467 120 aa23.74■■□□□ 1.39
SNX3-202ENST00000349379 HUS1O60921 280 aa23.74■■□□□ 1.39
SNX3-202ENST00000349379 ELF1P32519 619 aa23.74■■□□□ 1.39
SNX3-202ENST00000349379 PSMC2P35998 433 aaKnown RBP23.74■■□□□ 1.39
SNX3-202ENST00000349379 LRRC63Q05C16 580 aa23.74■■□□□ 1.39
SNX3-202ENST00000349379 SOWAHAQ2M3V2 549 aa23.74■■□□□ 1.39
SNX3-202ENST00000349379 ZACNQ401N2 412 aa23.74■■□□□ 1.39
SNX3-202ENST00000349379 ANKRD40Q6AI12 368 aa23.74■■□□□ 1.39
SNX3-202ENST00000349379 ISM2Q6H9L7 571 aa23.74■■□□□ 1.39
SNX3-202ENST00000349379 INTS8Q75QN2 995 aaKnown RBP23.74■■□□□ 1.39
SNX3-202ENST00000349379 FAM186BQ8IYM0 893 aa23.74■■□□□ 1.39
SNX3-202ENST00000349379 THEM5Q8N1Q8 247 aa23.74■■□□□ 1.39
SNX3-202ENST00000349379 DHTKD1Q96HY7 919 aaPredicted RBP23.74■■□□□ 1.39
SNX3-202ENST00000349379 PIDD1Q9HB75 910 aa23.74■■□□□ 1.39
SNX3-202ENST00000349379 R3HCC1Q9Y3T6 440 aaKnown RBP23.74■■□□□ 1.39
SNX3-202ENST00000349379 INSL5Q9Y5Q6 135 aa23.74■■□□□ 1.39
SNX3-202ENST00000349379 MTMR11A4FU01 709 aa23.73■■□□□ 1.39
SNX3-202ENST00000349379 PPP1R3GB7ZBB8 358 aa23.73■■□□□ 1.39
SNX3-202ENST00000349379 XYLBO75191 536 aa23.73■■□□□ 1.39
SNX3-202ENST00000349379 CCNE1P24864 410 aa23.73■■□□□ 1.39
SNX3-202ENST00000349379 ATICP31939 592 aa23.73■■□□□ 1.39
SNX3-202ENST00000349379 VAMP7P51809 220 aa23.73■■□□□ 1.39
SNX3-202ENST00000349379 FOXR2Q6PJQ5 311 aa23.73■■□□□ 1.39
SNX3-202ENST00000349379 OSTM1Q86WC4 334 aa23.73■■□□□ 1.39
SNX3-202ENST00000349379 RNF135Q8IUD6 432 aa23.73■■□□□ 1.39
SNX3-202ENST00000349379 TRIML1Q8N9V2 468 aa23.73■■□□□ 1.39
SNX3-202ENST00000349379 CRISPLD1Q9H336 500 aa23.73■■□□□ 1.39
SNX3-202ENST00000349379 KIAA1468Q9P260 1216 aa23.73■■□□□ 1.39
SNX3-202ENST00000349379 HSFX1Q9UBD0 423 aa23.73■■□□□ 1.39
SNX3-202ENST00000349379 DENND4CQ5VZ89 1909 aa23.72■■□□□ 1.39
SNX3-202ENST00000349379 TRIM49BA6NDI0 452 aa23.72■■□□□ 1.39
SNX3-202ENST00000349379 PRRG1O14668 218 aa23.72■■□□□ 1.39
SNX3-202ENST00000349379 PSMA7O14818 248 aa23.72■■□□□ 1.39
SNX3-202ENST00000349379 CETN3O15182 167 aa23.72■■□□□ 1.39
SNX3-202ENST00000349379 VNN1O95497 513 aa23.72■■□□□ 1.39
SNX3-202ENST00000349379 MYL6P60660 151 aa23.72■■□□□ 1.39
SNX3-202ENST00000349379 FKBP3Q00688 224 aaKnown RBP23.72■■□□□ 1.39
SNX3-202ENST00000349379 STIM1Q13586 685 aa23.72■■□□□ 1.39
SNX3-202ENST00000349379 SV2AQ7L0J3 742 aa23.72■■□□□ 1.39
SNX3-202ENST00000349379 LRRTM3Q86VH5 581 aa23.72■■□□□ 1.39
SNX3-202ENST00000349379 ADGRF2Q8IZF7 708 aa23.72■■□□□ 1.39
SNX3-202ENST00000349379 ZDHHC14Q8IZN3 488 aa23.72■■□□□ 1.39
SNX3-202ENST00000349379 KBTBD7Q8WVZ9 684 aa23.72■■□□□ 1.39
SNX3-202ENST00000349379 PGLYRP2Q96PD5 576 aa23.72■■□□□ 1.39
SNX3-202ENST00000349379 GBP4Q96PP9 640 aa23.72■■□□□ 1.39
SNX3-202ENST00000349379 TSG101Q99816 390 aa23.72■■□□□ 1.39
SNX3-202ENST00000349379 GREB1Q4ZG55 1949 aa23.71■■□□□ 1.39
SNX3-202ENST00000349379 N4BP1O75113 896 aaKnown RBP23.71■■□□□ 1.39
SNX3-202ENST00000349379 SP100P23497 879 aaPredicted RBP23.71■■□□□ 1.39
SNX3-202ENST00000349379 BIRC3Q13489 604 aa23.71■■□□□ 1.39
SNX3-202ENST00000349379 TRPC3Q13507 836 aa23.71■■□□□ 1.39
SNX3-202ENST00000349379 CAMK4Q16566 473 aa23.71■■□□□ 1.39
SNX3-202ENST00000349379 OTOP3Q7RTS5 596 aa23.71■■□□□ 1.39
SNX3-202ENST00000349379 GRASPQ7Z6J2 395 aaPredicted RBP23.71■■□□□ 1.39
SNX3-202ENST00000349379 TDRD5Q8NAT2 981 aaKnown RBP23.71■■□□□ 1.39
SNX3-202ENST00000349379 SYAP1Q96A49 352 aaPredicted RBP23.71■■□□□ 1.39
SNX3-202ENST00000349379 PKMYT1Q99640 499 aa23.71■■□□□ 1.39
SNX3-202ENST00000349379 ACBD6Q9BR61 282 aa23.71■■□□□ 1.39
SNX3-202ENST00000349379 CLSTN2Q9H4D0 955 aa23.71■■□□□ 1.39
SNX3-202ENST00000349379 DDX43Q9NXZ2 648 aaKnown RBP23.71■■□□□ 1.39
SNX3-202ENST00000349379 DNMT3BQ9UBC3 853 aaKnown RBP23.71■■□□□ 1.39
SNX3-202ENST00000349379 PI4K2BG5E9Z4 385 aa23.7■■□□□ 1.38
SNX3-202ENST00000349379 BIN1O00499 593 aa23.7■■□□□ 1.38
SNX3-202ENST00000349379 LRG1P02750 347 aa23.7■■□□□ 1.38
SNX3-202ENST00000349379 FAM163BP0C2L3 166 aa23.7■■□□□ 1.38
SNX3-202ENST00000349379 KRT13P13646 458 aa23.7■■□□□ 1.38
SNX3-202ENST00000349379 LHX1P48742 406 aa23.7■■□□□ 1.38
SNX3-202ENST00000349379 SMARCB1Q12824 385 aa23.7■■□□□ 1.38
SNX3-202ENST00000349379 DUSP4Q13115 394 aa23.7■■□□□ 1.38
SNX3-202ENST00000349379 NCOA4Q13772 614 aa23.7■■□□□ 1.38
SNX3-202ENST00000349379 TTI2Q6NXR4 508 aa23.7■■□□□ 1.38
SNX3-202ENST00000349379 PLCD3Q8N3E9 789 aa23.7■■□□□ 1.38
SNX3-202ENST00000349379 ATAD1Q8NBU5 361 aa23.7■■□□□ 1.38
SNX3-202ENST00000349379 EEF2KMTQ96G04 330 aa23.7■■□□□ 1.38
SNX3-202ENST00000349379 AVENQ9NQS1 362 aaPredicted RBP23.7■■□□□ 1.38
SNX3-202ENST00000349379 HCFC1R1Q9NWW0 138 aa23.7■■□□□ 1.38
SNX3-202ENST00000349379 YIPF1Q9Y548 306 aa23.7■■□□□ 1.38
SNX3-202ENST00000349379 OBSL1O75147 1896 aa23.69■■□□□ 1.38
SNX3-202ENST00000349379 SLC16A3O15427 465 aaKnown RBP23.69■■□□□ 1.38
SNX3-202ENST00000349379 PHACTR2O75167 634 aa23.69■■□□□ 1.38
SNX3-202ENST00000349379 TACC1O75410 805 aa23.69■■□□□ 1.38
SNX3-202ENST00000349379 TRIM49P0CI25 452 aa23.69■■□□□ 1.38
SNX3-202ENST00000349379 TRIM49CP0CI26 452 aa23.69■■□□□ 1.38
SNX3-202ENST00000349379 EPB41P11171 864 aaKnown RBP23.69■■□□□ 1.38
SNX3-202ENST00000349379 WARSP23381 471 aaKnown RBP23.69■■□□□ 1.38
SNX3-202ENST00000349379 NTHL1P78549 312 aa23.69■■□□□ 1.38
SNX3-202ENST00000349379 MYL7Q01449 175 aa23.69■■□□□ 1.38
SNX3-202ENST00000349379 PPP3CAQ08209 521 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms