RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 GOLGA6L10A6NI86 522 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 E7EWF7 191 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 NKRFO15226 690 aaKnown RBP eCLIP8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 TEX33O43247 280 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 RPS6KA4O75676 772 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 CIAO1O76071 339 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 SASH1O94885 1247 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 ATP6V1G2O95670 118 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 GYPCP04921 128 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 ATP1A1P05023 1023 aaKnown RBP8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 FESP07332 822 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 RPS6KA3P51812 740 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 EPHA5P54756 1037 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 LACTBP83111 547 aaPredicted RBP8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 TRIM29Q14134 588 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 TCEA2Q15560 299 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 HLFQ16534 295 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 IMMTQ16891 758 aaKnown RBP8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 SLC5A9Q2M3M2 681 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 TKFCQ3LXA3 575 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 CCDC122Q5T0U0 273 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 SLC9C2Q5TAH2 1124 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 LRIG3Q6UXM1 1119 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 CCDC129Q6ZRS4 1044 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 FAM43BQ6ZT52 329 aaPredicted RBP8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 APTXQ7Z2E3 356 aaKnown RBP8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 CACNA2D4Q7Z3S7 1137 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 KRT27Q7Z3Y8 459 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 MILR1Q7Z6M3 343 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 IFT20Q8IY31 132 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 CACNA2D3Q8IZS8 1091 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 ALG3Q92685 438 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 CUL5Q93034 780 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 ARL8AQ96BM9 186 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 CYFIP2Q96F07 1278 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 ATP6V1G3Q96LB4 118 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 NUP88Q99567 741 aaPredicted RBP8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 RABEP2Q9H5N1 569 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 KIF9Q9HAQ2 790 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 NOD2Q9HC29 1040 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 SAMSN1Q9NSI8 373 aaKnown RBP8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 HAUS2Q9NVX0 235 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 ZNHIT6Q9NWK9 470 aaKnown RBP8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 C15orf41Q9Y2V0 281 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 ADAMTS20P59510 1910 aa8.35□□□□□ -1.07
UBE2D3-204ENST00000349311 TAF1P21675 1872 aa8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 MYH10P35580 1976 aa8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 GOLGA6L10A0A0M3HER8 536 aa8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 A0A0U1RQJ8 604 aa8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 GMNCA6NCL1 334 aa8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 C5orf60A6NFR6 353 aa8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 GOLGA8BA8MQT2 603 aa8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 KIF28PB7ZC32 967 aa8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 E7EVH7 732 aa8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 NFIBO00712 420 aa8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 RASGRP1O95267 797 aa8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 FERP16591 822 aa8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 TCP1P17987 556 aaKnown RBP8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 PAFAH1B1P43034 410 aa8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 FXR1P51114 621 aaKnown RBP eCLIP8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 CAP1Q01518 475 aa8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 CACNB2Q08289 660 aaPredicted RBP8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 C2orf54Q08AI8 447 aa8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 E2F5Q15329 346 aa8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 TARBP2Q15633 366 aaKnown RBP8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 ZNF124Q15973 351 aa8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 PLEKHG4Q58EX7 1191 aa8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 LMBR1LQ6UX01 489 aa8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 FAM228AQ86W67 206 aa8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 FAM126BQ8IXS8 530 aa8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 GSPT2Q8IYD1 628 aaKnown RBP8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 CCDC170Q8IYT3 715 aa8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 RPUSD2Q8IZ73 545 aaKnown RBP8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 TEX9Q8N6V9 391 aa8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 TTLL11Q8NHH1 800 aa8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 CAPZA3Q96KX2 299 aa8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 SIGLEC10Q96LC7 697 aa8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 MAGEB10Q96LZ2 347 aaPredicted RBP8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 ZIM3Q96PE6 472 aa8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 MAP3K14Q99558 947 aa8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 BCAS3Q9H6U6 928 aa8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 PA2G4Q9UQ80 394 aaKnown RBP8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 RIC1Q4ADV7 1423 aa8.34□□□□□ -1.07
UBE2D3-204ENST00000349311 KLF18A0A0U1RQI7 1052 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 FRMD3A2A2Y4 597 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 KRIT1O00522 736 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 PDE8AO60658 829 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 TACC1O75410 805 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 TFRCP02786 760 aaKnown RBP8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 AMY2AP04746 511 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 SETSIPP0DME0 302 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 IDEP14735 1019 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 AMY2BP19961 511 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 KRT9P35527 623 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 IL15P40933 162 aaPredicted RBP8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 RAP1GAPP47736 663 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 RAB27AP51159 221 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 COPB1P53618 953 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms