RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 NR2E3Q9Y5X4 410 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 CCT8L1PA6NM43 557 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 LIASO43766 372 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 UBOX5O94941 541 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 MAP3K6O95382 1288 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 HOXC6P09630 235 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 PECAM1P16284 738 aaPredicted RBP6.4□□□□□ -1.38
CLCN3-201ENST00000347613 CYP3A5P20815 502 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 TCF7P36402 384 aaPredicted RBP6.4□□□□□ -1.38
CLCN3-201ENST00000347613 SSR1P43307 286 aaKnown RBP6.4□□□□□ -1.38
CLCN3-201ENST00000347613 NSFP46459 744 aaKnown RBP6.4□□□□□ -1.38
CLCN3-201ENST00000347613 DYNLT1P63172 113 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 RNASELQ05823 741 aaKnown RBP6.4□□□□□ -1.38
CLCN3-201ENST00000347613 PKN2Q16513 984 aaKnown RBP6.4□□□□□ -1.38
CLCN3-201ENST00000347613 ACCSLQ4AC99 568 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 LACTB2Q53H82 288 aaPredicted RBP6.4□□□□□ -1.38
CLCN3-201ENST00000347613 IZUMO3Q5VZ72 239 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 MFSD5Q6N075 450 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 ANKMY2Q8IV38 441 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 CXorf38Q8TB03 319 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 GGA3Q9NZ52 723 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 WHRNQ9P202 907 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 SIX4Q9UIU6 781 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 SLC12A4Q9UP95 1085 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 SNCAIPQ9Y6H5 919 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 PASKQ96RG2 1323 aa6.4□□□□□ -1.38
CLCN3-201ENST00000347613 SNX3O60493 162 aa6.4□□□□□ -1.39
CLCN3-201ENST00000347613 AGTP01019 485 aa6.4□□□□□ -1.39
CLCN3-201ENST00000347613 VIMP08670 466 aaKnown RBP6.4□□□□□ -1.39
CLCN3-201ENST00000347613 SCN1AP35498 2009 aa6.4□□□□□ -1.39
CLCN3-201ENST00000347613 ALDH5A1P51649 535 aaPredicted RBP6.4□□□□□ -1.39
CLCN3-201ENST00000347613 EIF3BP55884 814 aaKnown RBP6.4□□□□□ -1.39
CLCN3-201ENST00000347613 NFX1Q12986 1120 aaKnown RBP6.4□□□□□ -1.39
CLCN3-201ENST00000347613 MMRN1Q13201 1228 aa6.4□□□□□ -1.39
CLCN3-201ENST00000347613 VGLL4Q14135 290 aa6.4□□□□□ -1.39
CLCN3-201ENST00000347613 PTPN20Q4JDL3 420 aa6.4□□□□□ -1.39
CLCN3-201ENST00000347613 XKR3Q5GH77 459 aa6.4□□□□□ -1.39
CLCN3-201ENST00000347613 SPDYCQ5MJ68 293 aa6.4□□□□□ -1.39
CLCN3-201ENST00000347613 C6orf118Q5T5N4 469 aa6.4□□□□□ -1.39
CLCN3-201ENST00000347613 CYB5D1Q6P9G0 228 aa6.4□□□□□ -1.39
CLCN3-201ENST00000347613 NPNTQ6UXI9 565 aa6.4□□□□□ -1.39
CLCN3-201ENST00000347613 CYP4V2Q6ZWL3 525 aaPredicted RBP6.4□□□□□ -1.39
CLCN3-201ENST00000347613 PHF13Q86YI8 300 aaPredicted RBP6.4□□□□□ -1.39
CLCN3-201ENST00000347613 SRRM1Q8IYB3 904 aaKnown RBP6.4□□□□□ -1.39
CLCN3-201ENST00000347613 CACNA2D3Q8IZS8 1091 aa6.4□□□□□ -1.39
CLCN3-201ENST00000347613 KIRREL3Q8IZU9 778 aa6.4□□□□□ -1.39
CLCN3-201ENST00000347613 ATP6V0A1Q93050 837 aa6.4□□□□□ -1.39
CLCN3-201ENST00000347613 SNF8Q96H20 258 aa6.4□□□□□ -1.39
CLCN3-201ENST00000347613 TSPYL1Q9H0U9 437 aa6.4□□□□□ -1.39
CLCN3-201ENST00000347613 CDH23Q9H251 3354 aa6.4□□□□□ -1.39
CLCN3-201ENST00000347613 AVENQ9NQS1 362 aaPredicted RBP6.4□□□□□ -1.39
CLCN3-201ENST00000347613 CISHQ9NSE2 258 aa6.4□□□□□ -1.39
CLCN3-201ENST00000347613 MAP3K20Q9NYL2 800 aaKnown RBP6.4□□□□□ -1.39
CLCN3-201ENST00000347613 ANAPC5Q9UJX4 755 aa6.4□□□□□ -1.39
CLCN3-201ENST00000347613 EXOC7Q9UPT5 735 aa6.4□□□□□ -1.39
CLCN3-201ENST00000347613 NFASCO94856 1347 aa6.4□□□□□ -1.39
CLCN3-201ENST00000347613 GABBR2O75899 941 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 GGPS1O95749 300 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 ASS1P00966 412 aaKnown RBP6.39□□□□□ -1.39
CLCN3-201ENST00000347613 ATF7P17544 494 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-201ENST00000347613 SNRPFP62306 86 aaKnown RBP6.39□□□□□ -1.39
CLCN3-201ENST00000347613 ELF3P78545 371 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-201ENST00000347613 R3HDM1Q15032 1099 aaKnown RBP6.39□□□□□ -1.39
CLCN3-201ENST00000347613 OASLQ15646 514 aaKnown RBP6.39□□□□□ -1.39
CLCN3-201ENST00000347613 SLC1A5Q15758 541 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 PLEKHG4Q58EX7 1191 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 DALRD3Q5D0E6 543 aaKnown RBP6.39□□□□□ -1.39
CLCN3-201ENST00000347613 MAP1SQ66K74 1059 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-201ENST00000347613 GPAT2Q6NUI2 795 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 ILDR2Q71H61 639 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 SUGP1Q8IWZ8 645 aaKnown RBP6.39□□□□□ -1.39
CLCN3-201ENST00000347613 THNSL1Q8IYQ7 743 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 CCDC33Q8N5R6 958 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 NETO2Q8NC67 525 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 ATL2Q8NHH9 583 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 FEZF2Q8TBJ5 459 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 JDP2Q8WYK2 163 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 UTP4Q969X6 686 aaKnown RBP6.39□□□□□ -1.39
CLCN3-201ENST00000347613 FNBP1Q96RU3 617 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 PEBP4Q96S96 227 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 CPXM1Q96SM3 734 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 TIPINQ9BVW5 301 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 TEX13BQ9BXU2 312 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 MAK16Q9BXY0 300 aaKnown RBP6.39□□□□□ -1.39
CLCN3-201ENST00000347613 NIFKQ9BYG3 293 aaKnown RBP6.39□□□□□ -1.39
CLCN3-201ENST00000347613 RNPEPQ9H4A4 650 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 ACAD9Q9H845 621 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 PRKAG3Q9UGI9 489 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 TCEAL9Q9UHQ7 104 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 L3MBTL1Q9Y468 752 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 CLUHO75153 1309 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 ADM5C9JUS6 153 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 AVILO75366 819 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 PIGRP01833 764 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 ITIH2P19823 946 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 IGFBP6P24592 240 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-201ENST00000347613 SSTR1P30872 391 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 CDKN2BP42772 138 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 RTP1P59025 263 aa6.39□□□□□ -1.39
CLCN3-201ENST00000347613 GALNTL6Q49A17 601 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms