RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 THAP2Q9H0W7 228 aa11.7□□□□□ -0.54
ECM1-201ENST00000346569 KIAA1257Q9ULG3 409 aa11.7□□□□□ -0.54
ECM1-201ENST00000346569 JRKLQ9Y4A0 524 aa11.7□□□□□ -0.54
ECM1-201ENST00000346569 NME7Q9Y5B8 376 aa11.7□□□□□ -0.54
ECM1-201ENST00000346569 SNX9Q9Y5X1 595 aa11.7□□□□□ -0.54
ECM1-201ENST00000346569 NCANO14594 1321 aa11.7□□□□□ -0.54
ECM1-201ENST00000346569 RIOK3O14730 519 aaKnown RBP11.69□□□□□ -0.54
ECM1-201ENST00000346569 PQBP1O60828 265 aaKnown RBP11.69□□□□□ -0.54
ECM1-201ENST00000346569 URI1O94763 535 aaPredicted RBP11.69□□□□□ -0.54
ECM1-201ENST00000346569 MTA2O94776 668 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 PARNO95453 639 aaKnown RBP11.69□□□□□ -0.54
ECM1-201ENST00000346569 CXCL10P02778 98 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 VDRP11473 427 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 CAPN2P17655 700 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 ABCB4P21439 1286 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 BRD2P25440 801 aaKnown RBP11.69□□□□□ -0.54
ECM1-201ENST00000346569 SCNN1GP51170 649 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 NDST1P52848 882 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 PTP4A2Q12974 167 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 TUBB2AQ13885 445 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 UNC93AQ86WB7 457 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 CRIPAKQ8N1N5 446 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 LRRC57Q8N9N7 239 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 DIS3LQ8TF46 1054 aaKnown RBP11.69□□□□□ -0.54
ECM1-201ENST00000346569 CPA5Q8WXQ8 436 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 ZNF560Q96MR9 790 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 RPS6KC1Q96S38 1066 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 MMS19Q96T76 1030 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 MRPL45Q9BRJ2 306 aaKnown RBP11.69□□□□□ -0.54
ECM1-201ENST00000346569 TUBB2BQ9BVA1 445 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 ZNF518BQ9C0D4 1074 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 LHX5Q9H2C1 402 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 ELAC1Q9H777 363 aaKnown RBP11.69□□□□□ -0.54
ECM1-201ENST00000346569 ABCB6Q9NP58 842 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 HMGXB4Q9UGU5 601 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 PDCD11Q14690 1871 aaKnown RBP11.69□□□□□ -0.54
ECM1-201ENST00000346569 GRID2IPA4D2P6 1211 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 PALMO75781 387 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 CLSTN1O94985 981 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 ATP1A1P05023 1023 aaKnown RBP11.69□□□□□ -0.54
ECM1-201ENST00000346569 PRLRP16471 622 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 NOP2P46087 812 aaKnown RBP11.69□□□□□ -0.54
ECM1-201ENST00000346569 AARSP49588 968 aaKnown RBP eCLIP11.69□□□□□ -0.54
ECM1-201ENST00000346569 IFI16Q16666 785 aaKnown RBP11.69□□□□□ -0.54
ECM1-201ENST00000346569 TCTN1Q2MV58 587 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 TRIM60Q495X7 471 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 SV2CQ496J9 727 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 PPP1R2P3Q6NXS1 205 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 CD300LGQ6UXG3 332 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 MON1BQ7L1V2 547 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 PHF13Q86YI8 300 aaPredicted RBP11.69□□□□□ -0.54
ECM1-201ENST00000346569 RHOT2Q8IXI1 618 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 CRYBG2Q8N1P7 616 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 KBTBD7Q8WVZ9 684 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 CALR3Q96L12 384 aaKnown RBP11.69□□□□□ -0.54
ECM1-201ENST00000346569 NT5C1AQ9BXI3 368 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 TLR10Q9BXR5 811 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 HIPK3Q9H422 1215 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 OSGEPQ9NPF4 335 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 PUF60Q9UHX1 559 aaKnown RBP11.69□□□□□ -0.54
ECM1-201ENST00000346569 CDC23Q9UJX2 597 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 GTF3C4Q9UKN8 822 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 TBX21Q9UL17 535 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 COG5Q9UP83 839 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 MRFAP1Q9Y605 127 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 MYH10P35580 1976 aa11.69□□□□□ -0.54
ECM1-201ENST00000346569 ENC1O14682 589 aa11.68□□□□□ -0.54
ECM1-201ENST00000346569 GABRDO14764 452 aa11.68□□□□□ -0.54
ECM1-201ENST00000346569 MED7O43513 233 aa11.68□□□□□ -0.54
ECM1-201ENST00000346569 LSM8O95777 96 aaKnown RBP11.68□□□□□ -0.54
ECM1-201ENST00000346569 FGFR1P11362 822 aa11.68□□□□□ -0.54
ECM1-201ENST00000346569 MMP8P22894 467 aa11.68□□□□□ -0.54
ECM1-201ENST00000346569 SSTR3P32745 418 aaPredicted RBP11.68□□□□□ -0.54
ECM1-201ENST00000346569 CLCNKBP51801 687 aa11.68□□□□□ -0.54
ECM1-201ENST00000346569 NAP1L1P55209 391 aaKnown RBP11.68□□□□□ -0.54
ECM1-201ENST00000346569 C1QBPQ07021 282 aaKnown RBP11.68□□□□□ -0.54
ECM1-201ENST00000346569 GRIK3Q13003 919 aa11.68□□□□□ -0.54
ECM1-201ENST00000346569 UPP1Q16831 310 aa11.68□□□□□ -0.54
ECM1-201ENST00000346569 MEI1Q5TIA1 1274 aa11.68□□□□□ -0.54
ECM1-201ENST00000346569 NAA35Q5VZE5 725 aa11.68□□□□□ -0.54
ECM1-201ENST00000346569 TOP6BLQ8N6T0 577 aa11.68□□□□□ -0.54
ECM1-201ENST00000346569 RNF169Q8NCN4 708 aa11.68□□□□□ -0.54
ECM1-201ENST00000346569 TMEM35BQ8NCS4 154 aa11.68□□□□□ -0.54
ECM1-201ENST00000346569 MYRIPQ8NFW9 859 aa11.68□□□□□ -0.54
ECM1-201ENST00000346569 SEPT8Q92599 483 aa11.68□□□□□ -0.54
ECM1-201ENST00000346569 APBB2Q92870 758 aa11.68□□□□□ -0.54
ECM1-201ENST00000346569 VWCEQ96DN2 955 aa11.68□□□□□ -0.54
ECM1-201ENST00000346569 DDX27Q96GQ7 796 aaKnown RBP11.68□□□□□ -0.54
ECM1-201ENST00000346569 PAWRQ96IZ0 340 aaKnown RBP11.68□□□□□ -0.54
ECM1-201ENST00000346569 SENP8Q96LD8 212 aa11.68□□□□□ -0.54
ECM1-201ENST00000346569 HEXIM2Q96MH2 286 aaKnown RBP11.68□□□□□ -0.54
ECM1-201ENST00000346569 ALS2CR12Q96Q35 445 aa11.68□□□□□ -0.54
ECM1-201ENST00000346569 WNT8AQ9H1J5 351 aa11.68□□□□□ -0.54
ECM1-201ENST00000346569 PDCL3Q9H2J4 239 aa11.68□□□□□ -0.54
ECM1-201ENST00000346569 AVENQ9NQS1 362 aaPredicted RBP11.68□□□□□ -0.54
ECM1-201ENST00000346569 TMEM161AQ9NX61 479 aa11.68□□□□□ -0.54
ECM1-201ENST00000346569 L1RE1Q9UN81 338 aa11.68□□□□□ -0.54
ECM1-201ENST00000346569 STXBP5LQ9Y2K9 1186 aa11.68□□□□□ -0.54
ECM1-201ENST00000346569 KIAA0100Q14667 2235 aaKnown RBP11.67□□□□□ -0.54
ECM1-201ENST00000346569 O00370 1275 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms