RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 SLC39A12Q504Y0 691 aa16.95■□□□□ 0.3
TSPAN4-201ENST00000346501 MTSS1LQ765P7 747 aa16.95■□□□□ 0.3
TSPAN4-201ENST00000346501 PDZD4Q76G19 769 aaPredicted RBP16.95■□□□□ 0.3
TSPAN4-201ENST00000346501 TRAPPC11Q7Z392 1133 aa16.95■□□□□ 0.3
TSPAN4-201ENST00000346501 TOP6BLQ8N6T0 577 aa16.95■□□□□ 0.3
TSPAN4-201ENST00000346501 MFSD14AQ96MC6 490 aa16.95■□□□□ 0.3
TSPAN4-201ENST00000346501 MMS19Q96T76 1030 aa16.95■□□□□ 0.3
TSPAN4-201ENST00000346501 CORO1BQ9BR76 489 aa16.95■□□□□ 0.3
TSPAN4-201ENST00000346501 LRFN3Q9BTN0 628 aa16.95■□□□□ 0.3
TSPAN4-201ENST00000346501 ASAH2Q9NR71 780 aa16.95■□□□□ 0.3
TSPAN4-201ENST00000346501 GDAP2Q9NXN4 497 aa16.95■□□□□ 0.3
TSPAN4-201ENST00000346501 SEC24AO95486 1093 aa16.94■□□□□ 0.3
TSPAN4-201ENST00000346501 ASGR2P07307 311 aa16.94■□□□□ 0.3
TSPAN4-201ENST00000346501 RHOP08100 348 aa16.94■□□□□ 0.3
TSPAN4-201ENST00000346501 OR4Q2P0C623 313 aa16.94■□□□□ 0.3
TSPAN4-201ENST00000346501 KRT13P13646 458 aa16.94■□□□□ 0.3
TSPAN4-201ENST00000346501 TNNC1P63316 161 aa16.94■□□□□ 0.3
TSPAN4-201ENST00000346501 DUSP4Q13115 394 aa16.94■□□□□ 0.3
TSPAN4-201ENST00000346501 NFE2Q16621 373 aaPredicted RBP16.94■□□□□ 0.3
TSPAN4-201ENST00000346501 ITIH5Q86UX2 942 aa16.94■□□□□ 0.3
TSPAN4-201ENST00000346501 SUGP1Q8IWZ8 645 aaKnown RBP16.94■□□□□ 0.3
TSPAN4-201ENST00000346501 OR5B17Q8NGF7 314 aa16.94■□□□□ 0.3
TSPAN4-201ENST00000346501 FAM200AQ8TCP9 573 aa16.94■□□□□ 0.3
TSPAN4-201ENST00000346501 SPPL2BQ8TCT7 592 aa16.94■□□□□ 0.3
TSPAN4-201ENST00000346501 TMEM174Q8WUU8 243 aa16.94■□□□□ 0.3
TSPAN4-201ENST00000346501 SYAP1Q96A49 352 aaPredicted RBP16.94■□□□□ 0.3
TSPAN4-201ENST00000346501 MYADMQ96S97 322 aa16.94■□□□□ 0.3
TSPAN4-201ENST00000346501 TSG101Q99816 390 aa16.94■□□□□ 0.3
TSPAN4-201ENST00000346501 ZCWPW1Q9H0M4 648 aa16.94■□□□□ 0.3
TSPAN4-201ENST00000346501 KCTD10Q9H3F6 313 aa16.94■□□□□ 0.3
TSPAN4-201ENST00000346501 KCNK12Q9HB15 430 aa16.94■□□□□ 0.3
TSPAN4-201ENST00000346501 DNMT3BQ9UBC3 853 aaKnown RBP16.94■□□□□ 0.3
TSPAN4-201ENST00000346501 MAPK8IP1Q9UQF2 711 aa16.94■□□□□ 0.3
TSPAN4-201ENST00000346501 TRAF3IP3Q9Y228 551 aa16.94■□□□□ 0.3
TSPAN4-201ENST00000346501 HCN4Q9Y3Q4 1203 aa16.94■□□□□ 0.3
TSPAN4-201ENST00000346501 YIPF1Q9Y548 306 aa16.94■□□□□ 0.3
TSPAN4-201ENST00000346501 ASB3Q9Y575 518 aa16.94■□□□□ 0.3
TSPAN4-201ENST00000346501 C2orf16Q68DN1 1984 aa16.94■□□□□ 0.3
TSPAN4-201ENST00000346501 MTMR11A4FU01 709 aa16.93■□□□□ 0.3
TSPAN4-201ENST00000346501 TMEM221A6NGB7 291 aa16.93■□□□□ 0.3
TSPAN4-201ENST00000346501 M0R296 226 aa16.93■□□□□ 0.3
TSPAN4-201ENST00000346501 FGF19O95750 216 aa16.93■□□□□ 0.3
TSPAN4-201ENST00000346501 NR2F2P24468 414 aa16.93■□□□□ 0.3
TSPAN4-201ENST00000346501 ATICP31939 592 aa16.93■□□□□ 0.3
TSPAN4-201ENST00000346501 PPP1R2P41236 205 aa16.93■□□□□ 0.3
TSPAN4-201ENST00000346501 NTHL1P78549 312 aa16.93■□□□□ 0.3
TSPAN4-201ENST00000346501 PNOCQ13519 176 aa16.93■□□□□ 0.3
TSPAN4-201ENST00000346501 MGAT5BQ3V5L5 792 aa16.93■□□□□ 0.3
TSPAN4-201ENST00000346501 CENPPQ6IPU0 288 aa16.93■□□□□ 0.3
TSPAN4-201ENST00000346501 ADGRF2Q8IZF7 708 aa16.93■□□□□ 0.3
TSPAN4-201ENST00000346501 PDCL2Q8N4E4 241 aa16.93■□□□□ 0.3
TSPAN4-201ENST00000346501 PBXIP1Q96AQ6 731 aa16.93■□□□□ 0.3
TSPAN4-201ENST00000346501 BORCS6Q96GS4 357 aa16.93■□□□□ 0.3
TSPAN4-201ENST00000346501 SEPT5Q99719 369 aaPredicted RBP16.93■□□□□ 0.3
TSPAN4-201ENST00000346501 ACBD6Q9BR61 282 aa16.93■□□□□ 0.3
TSPAN4-201ENST00000346501 AVENQ9NQS1 362 aaPredicted RBP16.93■□□□□ 0.3
TSPAN4-201ENST00000346501 DMAC2Q9NW81 257 aa16.93■□□□□ 0.3
TSPAN4-201ENST00000346501 DDX43Q9NXZ2 648 aaKnown RBP16.93■□□□□ 0.3
TSPAN4-201ENST00000346501 SIX4Q9UIU6 781 aa16.93■□□□□ 0.3
TSPAN4-201ENST00000346501 FBXL21Q9UKT6 434 aa16.93■□□□□ 0.3
TSPAN4-201ENST00000346501 PCDHB5Q9Y5E4 795 aa16.93■□□□□ 0.3
TSPAN4-201ENST00000346501 SCN1AP35498 2009 aa16.92■□□□□ 0.3
TSPAN4-201ENST00000346501 P4HA1P13674 534 aa16.92■□□□□ 0.3
TSPAN4-201ENST00000346501 TRIM21P19474 475 aaKnown RBP16.92■□□□□ 0.3
TSPAN4-201ENST00000346501 MAPRE1Q15691 268 aaKnown RBP16.92■□□□□ 0.3
TSPAN4-201ENST00000346501 NFIL3Q16649 462 aa16.92■□□□□ 0.3
TSPAN4-201ENST00000346501 ZNF658Q5TYW1 1059 aaPredicted RBP16.92■□□□□ 0.3
TSPAN4-201ENST00000346501 INTS8Q75QN2 995 aaKnown RBP16.92■□□□□ 0.3
TSPAN4-201ENST00000346501 ELOA2Q8IYF1 753 aaPredicted RBP16.92■□□□□ 0.3
TSPAN4-201ENST00000346501 ATAD1Q8NBU5 361 aa16.92■□□□□ 0.3
TSPAN4-201ENST00000346501 ENGASEQ8NFI3 743 aa16.92■□□□□ 0.3
TSPAN4-201ENST00000346501 OR10T2Q8NGX3 314 aa16.92■□□□□ 0.3
TSPAN4-201ENST00000346501 FEZF2Q8TBJ5 459 aa16.92■□□□□ 0.3
TSPAN4-201ENST00000346501 TMC2Q8TDI7 906 aa16.92■□□□□ 0.3
TSPAN4-201ENST00000346501 PARD3BQ8TEW8 1205 aa16.92■□□□□ 0.3
TSPAN4-201ENST00000346501 FGF13Q92913 245 aa16.92■□□□□ 0.3
TSPAN4-201ENST00000346501 SNX25Q9H3E2 840 aa16.92■□□□□ 0.3
TSPAN4-201ENST00000346501 MFSD1Q9H3U5 465 aa16.92■□□□□ 0.3
TSPAN4-201ENST00000346501 HCFC1R1Q9NWW0 138 aa16.92■□□□□ 0.3
TSPAN4-201ENST00000346501 ABI2Q9NYB9 513 aaPredicted RBP16.92■□□□□ 0.3
TSPAN4-201ENST00000346501 GDE1Q9NZC3 331 aa16.92■□□□□ 0.3
TSPAN4-201ENST00000346501 L1RE1Q9UN81 338 aa16.92■□□□□ 0.3
TSPAN4-201ENST00000346501 DENND4AQ7Z401 1863 aa16.92■□□□□ 0.3
TSPAN4-201ENST00000346501 MUC3AQ02505 3323 aa16.91■□□□□ 0.3
TSPAN4-201ENST00000346501 MAPK13O15264 365 aa16.91■□□□□ 0.3
TSPAN4-201ENST00000346501 MICAL2O94851 1124 aa16.91■□□□□ 0.3
TSPAN4-201ENST00000346501 FAM163BP0C2L3 166 aa16.91■□□□□ 0.3
TSPAN4-201ENST00000346501 MYL4P12829 197 aa16.91■□□□□ 0.3
TSPAN4-201ENST00000346501 RFX1P22670 979 aa16.91■□□□□ 0.3
TSPAN4-201ENST00000346501 PSMC2P35998 433 aaKnown RBP16.91■□□□□ 0.3
TSPAN4-201ENST00000346501 ADAM9Q13443 819 aa16.91■□□□□ 0.3
TSPAN4-201ENST00000346501 SNW1Q13573 536 aaKnown RBP16.91■□□□□ 0.3
TSPAN4-201ENST00000346501 WDR72Q3MJ13 1102 aa16.91■□□□□ 0.3
TSPAN4-201ENST00000346501 BMP8AQ7Z5Y6 402 aa16.91■□□□□ 0.3
TSPAN4-201ENST00000346501 GCNAQ96QF7 691 aa16.91■□□□□ 0.3
TSPAN4-201ENST00000346501 IMPG2Q9BZV3 1241 aa16.91■□□□□ 0.3
TSPAN4-201ENST00000346501 GPR88Q9GZN0 384 aa16.91■□□□□ 0.3
TSPAN4-201ENST00000346501 SLC27A5Q9Y2P5 690 aa16.91■□□□□ 0.3
TSPAN4-201ENST00000346501 PTPRJQ12913 1337 aa16.91■□□□□ 0.3
TSPAN4-201ENST00000346501 IKBKBO14920 756 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms