RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 AASDHQ4L235 1098 aaPredicted RBP12.64□□□□□ -0.39
COL12A1-202ENST00000345356 C1orf131Q8NDD1 294 aaKnown RBP12.64□□□□□ -0.39
COL12A1-202ENST00000345356 ATP8B4Q8TF62 1192 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 TRIM63Q969Q1 353 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 OXNAD1Q96HP4 312 aaPredicted RBP12.64□□□□□ -0.39
COL12A1-202ENST00000345356 KIAA1683Q9H0B3 1180 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 OSGEPQ9NPF4 335 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 ARMCX1Q9P291 453 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 CCNL1Q9UK58 526 aaPredicted RBP12.64□□□□□ -0.39
COL12A1-202ENST00000345356 DNAJC16Q9Y2G8 782 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 SAMD9LQ8IVG5 1584 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 USP6P35125 1406 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 USP17L10C9JJH3 530 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 PGM3O95394 542 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 TFE3P19532 575 aaPredicted RBP12.64□□□□□ -0.39
COL12A1-202ENST00000345356 CHN2P52757 468 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 MTFR1Q15390 333 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 DLGAP5Q15398 846 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 PAFAH2Q99487 392 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 TBC1D10AQ9BXI6 508 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 GALNT8Q9NY28 637 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 RABGEF1Q9UJ41 708 aa12.64□□□□□ -0.39
COL12A1-202ENST00000345356 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.63□□□□□ -0.39
COL12A1-202ENST00000345356 MYO1GB0I1T2 1018 aa12.63□□□□□ -0.39
COL12A1-202ENST00000345356 TCP10L2B9ZVM9 353 aa12.63□□□□□ -0.39
COL12A1-202ENST00000345356 TM9SF1O15321 606 aa12.63□□□□□ -0.39
COL12A1-202ENST00000345356 PID1Q7Z2X4 250 aa12.63□□□□□ -0.39
COL12A1-202ENST00000345356 ZNF554Q86TJ5 538 aa12.63□□□□□ -0.39
COL12A1-202ENST00000345356 THNSL1Q8IYQ7 743 aa12.63□□□□□ -0.39
COL12A1-202ENST00000345356 SIX5Q8N196 739 aa12.63□□□□□ -0.39
COL12A1-202ENST00000345356 MCEEQ96PE7 176 aa12.63□□□□□ -0.39
COL12A1-202ENST00000345356 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.63□□□□□ -0.39
COL12A1-202ENST00000345356 ZBTB1Q9Y2K1 713 aa12.63□□□□□ -0.39
COL12A1-202ENST00000345356 R3HDM2Q9Y2K5 976 aaKnown RBP12.63□□□□□ -0.39
COL12A1-202ENST00000345356 RASSF9O75901 435 aa12.63□□□□□ -0.39
COL12A1-202ENST00000345356 EYA4O95677 639 aa12.63□□□□□ -0.39
COL12A1-202ENST00000345356 TOB1P50616 345 aaPredicted RBP12.63□□□□□ -0.39
COL12A1-202ENST00000345356 RPS6KA3P51812 740 aa12.63□□□□□ -0.39
COL12A1-202ENST00000345356 STX5Q13190 355 aa12.63□□□□□ -0.39
COL12A1-202ENST00000345356 TNIP2Q8NFZ5 429 aa12.63□□□□□ -0.39
COL12A1-202ENST00000345356 DIS3LQ8TF46 1054 aaKnown RBP12.63□□□□□ -0.39
COL12A1-202ENST00000345356 SOX13Q9UN79 622 aa12.63□□□□□ -0.39
COL12A1-202ENST00000345356 MYRFQ9Y2G1 1151 aa12.63□□□□□ -0.39
COL12A1-202ENST00000345356 UBE2Q2LH0YL09 131 aa12.63□□□□□ -0.39
COL12A1-202ENST00000345356 KRT36O76013 467 aa12.63□□□□□ -0.39
COL12A1-202ENST00000345356 PSAPP07602 524 aa12.63□□□□□ -0.39
COL12A1-202ENST00000345356 ZNF23P17027 643 aa12.63□□□□□ -0.39
COL12A1-202ENST00000345356 MTTPP55157 894 aa12.63□□□□□ -0.39
COL12A1-202ENST00000345356 USP10Q14694 798 aaKnown RBP12.63□□□□□ -0.39
COL12A1-202ENST00000345356 C6orf10Q5SRN2 563 aa12.63□□□□□ -0.39
COL12A1-202ENST00000345356 FOXP4Q8IVH2 680 aaPredicted RBP12.63□□□□□ -0.39
COL12A1-202ENST00000345356 FBXO36Q8NEA4 188 aa12.63□□□□□ -0.39
COL12A1-202ENST00000345356 CALML6Q8TD86 181 aa12.63□□□□□ -0.39
COL12A1-202ENST00000345356 PRR23D1E9PI22 279 aaPredicted RBP12.63□□□□□ -0.39
COL12A1-202ENST00000345356 TAF4O00268 1085 aa12.63□□□□□ -0.39
COL12A1-202ENST00000345356 ZSCAN9O15535 394 aaPredicted RBP12.63□□□□□ -0.39
COL12A1-202ENST00000345356 TSC22D2O75157 780 aa12.63□□□□□ -0.39
COL12A1-202ENST00000345356 PRR23D2P0DMB1 279 aaPredicted RBP12.63□□□□□ -0.39
COL12A1-202ENST00000345356 ATG9AQ7Z3C6 839 aa12.63□□□□□ -0.39
COL12A1-202ENST00000345356 TAGAPQ8N103 731 aa12.63□□□□□ -0.39
COL12A1-202ENST00000345356 SNX19Q92543 992 aa12.63□□□□□ -0.39
COL12A1-202ENST00000345356 HACD3Q9P035 362 aa12.63□□□□□ -0.39
COL12A1-202ENST00000345356 COPG1Q9Y678 874 aaKnown RBP12.63□□□□□ -0.39
COL12A1-202ENST00000345356 RPL21P46778 160 aaKnown RBP12.62□□□□□ -0.39
COL12A1-202ENST00000345356 NCKAP1LP55160 1127 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 RBBP7Q16576 425 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 DOK7Q18PE1 504 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 CEP95Q96GE4 821 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 WNK4Q96J92 1243 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 MAD2L2Q9UI95 211 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 ABCB11O95342 1321 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 SMIM31A0A1B0GVY4 71 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 A0A1B0GW55 424 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 LGR5O75473 907 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 DUX4L2P0CJ85 424 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 DUX4L3P0CJ86 424 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 DUX4L4P0CJ87 422 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 DUX4L5P0CJ88 424 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 DUX4L6P0CJ89 424 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 DUX4L7P0CJ90 424 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 PYGMP11217 842 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 ITGADQ13349 1161 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 XRCC4Q13426 336 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 RNF220Q5VTB9 566 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 LMBRD2Q68DH5 695 aaPredicted RBP12.62□□□□□ -0.39
COL12A1-202ENST00000345356 TRIM74Q86UV6 250 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 TRIM73Q86UV7 250 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 DNAAF5Q86Y56 855 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 PYDC1Q8WXC3 89 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 ULK4Q96C45 1275 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 DUX4Q9UBX2 424 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 SLC13A4Q9UKG4 626 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 RGS5O15539 181 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 PPIP5K2O43314 1243 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 CST8O60676 142 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 PON1P27169 355 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 CNGA2Q16280 664 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 QPCTQ16769 361 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 GSTA3Q16772 222 aa12.62□□□□□ -0.39
COL12A1-202ENST00000345356 ARMC3Q5W041 872 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms