RNA–Protein interactions for RNA: ENST00000343742.6

LRRK2-202, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 5 BASIC

Gene LRRK2, Length 4,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-202ENST00000343742 CLEC16AQ2KHT3 1053 aa13.15□□□□□ -0.3
LRRK2-202ENST00000343742 PPM1NQ8N819 430 aa13.15□□□□□ -0.3
LRRK2-202ENST00000343742 BAIAP2L1Q9UHR4 511 aa13.15□□□□□ -0.3
LRRK2-202ENST00000343742 GLI3P10071 1580 aa13.15□□□□□ -0.3
LRRK2-202ENST00000343742 SOWAHBA6NEL2 793 aa13.15□□□□□ -0.3
LRRK2-202ENST00000343742 BRAFP15056 766 aa13.15□□□□□ -0.3
LRRK2-202ENST00000343742 PRLRP16471 622 aa13.15□□□□□ -0.3
LRRK2-202ENST00000343742 ADCY2Q08462 1091 aa13.15□□□□□ -0.3
LRRK2-202ENST00000343742 PSMD6Q15008 389 aa13.15□□□□□ -0.3
LRRK2-202ENST00000343742 ATP13A4Q4VNC1 1196 aa13.15□□□□□ -0.3
LRRK2-202ENST00000343742 ANKRD20A3Q5VUR7 823 aa13.15□□□□□ -0.3
LRRK2-202ENST00000343742 WDR93Q6P2C0 686 aa13.15□□□□□ -0.3
LRRK2-202ENST00000343742 ABRAQ8N0Z2 381 aa13.15□□□□□ -0.3
LRRK2-202ENST00000343742 SPATA18Q8TC71 538 aa13.15□□□□□ -0.3
LRRK2-202ENST00000343742 ISCUQ9H1K1 167 aa13.15□□□□□ -0.3
LRRK2-202ENST00000343742 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.15□□□□□ -0.3
LRRK2-202ENST00000343742 RRP15Q9Y3B9 282 aaKnown RBP13.15□□□□□ -0.3
LRRK2-202ENST00000343742 I3L4J1 428 aa13.14□□□□□ -0.31
LRRK2-202ENST00000343742 GAS2O43903 313 aaKnown RBP13.14□□□□□ -0.31
LRRK2-202ENST00000343742 RBP3P10745 1247 aa13.14□□□□□ -0.31
LRRK2-202ENST00000343742 MAPK7Q13164 816 aa13.14□□□□□ -0.31
LRRK2-202ENST00000343742 TLK2Q86UE8 772 aa13.14□□□□□ -0.31
LRRK2-202ENST00000343742 WDR49Q8IV35 697 aa13.14□□□□□ -0.31
LRRK2-202ENST00000343742 MDM1Q8TC05 714 aa13.14□□□□□ -0.31
LRRK2-202ENST00000343742 ZNF560Q96MR9 790 aa13.14□□□□□ -0.31
LRRK2-202ENST00000343742 KREMEN1Q96MU8 473 aa13.14□□□□□ -0.31
LRRK2-202ENST00000343742 MBOAT7Q96N66 472 aa13.14□□□□□ -0.31
LRRK2-202ENST00000343742 ABHD16BQ9H3Z7 469 aa13.14□□□□□ -0.31
LRRK2-202ENST00000343742 KCND1Q9NSA2 647 aa13.14□□□□□ -0.31
LRRK2-202ENST00000343742 PJA2O43164 708 aa13.14□□□□□ -0.31
LRRK2-202ENST00000343742 ARL4CP56559 192 aa13.14□□□□□ -0.31
LRRK2-202ENST00000343742 COBLL1Q53SF7 1204 aa13.14□□□□□ -0.31
LRRK2-202ENST00000343742 CCDC97Q96F63 343 aaPredicted RBP13.14□□□□□ -0.31
LRRK2-202ENST00000343742 KLF6Q99612 283 aaPredicted RBP13.14□□□□□ -0.31
LRRK2-202ENST00000343742 AKAP11Q9UKA4 1901 aa13.14□□□□□ -0.31
LRRK2-202ENST00000343742 PGK1P00558 417 aa13.14□□□□□ -0.31
LRRK2-202ENST00000343742 NFICP08651 508 aa13.14□□□□□ -0.31
LRRK2-202ENST00000343742 CCDC117Q8IWD4 279 aaPredicted RBP13.14□□□□□ -0.31
LRRK2-202ENST00000343742 FAM71DQ8N9W8 422 aa13.14□□□□□ -0.31
LRRK2-202ENST00000343742 HNRNPLLQ8WVV9 542 aaKnown RBP13.14□□□□□ -0.31
LRRK2-202ENST00000343742 TNIP3Q96KP6 325 aa13.14□□□□□ -0.31
LRRK2-202ENST00000343742 IFT122Q9HBG6 1241 aa13.14□□□□□ -0.31
LRRK2-202ENST00000343742 XPNPEP1Q9NQW7 623 aa13.14□□□□□ -0.31
LRRK2-202ENST00000343742 RAB6BQ9NRW1 208 aa13.14□□□□□ -0.31
LRRK2-202ENST00000343742 C17orf102A2RUQ5 167 aa13.14□□□□□ -0.31
LRRK2-202ENST00000343742 DHX15O43143 795 aaKnown RBP13.14□□□□□ -0.31
LRRK2-202ENST00000343742 HNRNPH3P31942 346 aaKnown RBP13.14□□□□□ -0.31
LRRK2-202ENST00000343742 SLC12A2P55011 1212 aa13.14□□□□□ -0.31
LRRK2-202ENST00000343742 ROR1Q01973 937 aa13.14□□□□□ -0.31
LRRK2-202ENST00000343742 BRSK2Q8IWQ3 736 aa13.14□□□□□ -0.31
LRRK2-202ENST00000343742 RCOR2Q8IZ40 523 aa13.14□□□□□ -0.31
LRRK2-202ENST00000343742 DCLK2Q8N568 766 aa13.14□□□□□ -0.31
LRRK2-202ENST00000343742 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.14□□□□□ -0.31
LRRK2-202ENST00000343742 SAE1Q9UBE0 346 aaPredicted RBP13.14□□□□□ -0.31
LRRK2-202ENST00000343742 PCDHA2Q9Y5H9 948 aa13.14□□□□□ -0.31
LRRK2-202ENST00000343742 RRN3P2A6NIE6 340 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 BNIP3LO60238 219 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 NDST1P52848 882 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 IL9RQ01113 521 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 SEPT6Q14141 434 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 PIGHQ14442 188 aaPredicted RBP13.13□□□□□ -0.31
LRRK2-202ENST00000343742 CXCL17Q6UXB2 119 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 ATXN7L3BQ96GX2 97 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 CALR3Q96L12 384 aaKnown RBP13.13□□□□□ -0.31
LRRK2-202ENST00000343742 TINF2Q9BSI4 451 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 TMEM121Q9BTD3 319 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 PLCH1Q4KWH8 1693 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 BTBD19C9JJ37 291 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 F8VP50 259 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 PRKCIP41743 596 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 SLC26A2P50443 739 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 PPP2R2AP63151 447 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 PTPN11Q06124 597 aaPredicted RBP13.13□□□□□ -0.31
LRRK2-202ENST00000343742 ZNF677Q86XU0 584 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 TTC13Q8NBP0 860 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 ATP2A3Q93084 1043 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 TTC17Q96AE7 1141 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 TXNRD2Q9NNW7 524 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 PCDHGC5Q9Y5F6 944 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 SPDYE5A6NIY4 337 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 RASSF10A6NK89 507 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 STRNO43815 780 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 CST3P01034 146 aaPredicted RBP13.13□□□□□ -0.31
LRRK2-202ENST00000343742 CPT1AP50416 773 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 NCKAP1LP55160 1127 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 SESN2P58004 480 aaPredicted RBP13.13□□□□□ -0.31
LRRK2-202ENST00000343742 GCNT1Q02742 428 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 HEATR6Q6AI08 1181 aaKnown RBP13.13□□□□□ -0.31
LRRK2-202ENST00000343742 RAPH1Q70E73 1250 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 PRUNE1Q86TP1 453 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 CCHCR1Q8TD31 782 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 SMYD3Q9H7B4 428 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 CASTOR2A6NHX0 329 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 ADSSP30520 456 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 HOXD13P35453 343 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 EPM2AIP1Q7L775 607 aaPredicted RBP13.13□□□□□ -0.31
LRRK2-202ENST00000343742 GPR142Q7Z601 462 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 CCDC197Q8NCU1 140 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 SCYL1Q96KG9 808 aa13.13□□□□□ -0.31
LRRK2-202ENST00000343742 PCDHB18PQ96TA0 734 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms