RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 DOK7Q18PE1 504 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 LRRC8EQ6NSJ5 796 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 FEM1BQ9UK73 627 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 LAMB4A4D0S4 1761 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 GRK2P25098 689 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 MYBPC2Q14324 1141 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 CHI3L2Q15782 390 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 DUPD1Q68J44 220 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 OR6B2Q6IFH4 312 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 TBC1D10AQ9BXI6 508 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 AGO2Q9UKV8 859 aaKnown RBP5.01□□□□□ -1.61
CSMD3-203ENST00000343508 TSC22D4Q9Y3Q8 395 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 ZNF839A8K0R7 811 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 H0Y626 953 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 TRIM16O95361 564 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 CASP7P55210 303 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 CDH6P55285 790 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 TTC16Q8NEE8 873 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 VCPIP1Q96JH7 1222 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 FSD1LQ9BXM9 530 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 EFCAB1Q9HAE3 211 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 DMAP1Q9NPF5 467 aaPredicted RBP5.01□□□□□ -1.61
CSMD3-203ENST00000343508 RHBDL2Q9NX52 303 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 SLC12A4Q9UP95 1085 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 GRIN2DO15399 1336 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 IGSF9BQ9UPX0 1349 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 SHBGP04278 402 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 GPC3P51654 580 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 SF3B3Q15393 1217 aaKnown RBP5.01□□□□□ -1.61
CSMD3-203ENST00000343508 EFHC1Q5JVL4 640 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 TTC8Q8TAM2 541 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 TMA16Q96EY4 203 aaKnown RBP5.01□□□□□ -1.61
CSMD3-203ENST00000343508 FAM111AQ96PZ2 611 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 MRPL4Q9BYD3 311 aaKnown RBP5.01□□□□□ -1.61
CSMD3-203ENST00000343508 LRRC19Q9H756 370 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 C20orf96Q9NUD7 363 aaPredicted RBP5.01□□□□□ -1.61
CSMD3-203ENST00000343508 hCG_2014768A0A024R1R8 64 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 GSTT1P30711 240 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 MTERF2Q49AM1 385 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 ZNF720Q7Z2F6 126 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 CELF1Q92879 486 aaKnown RBP5.01□□□□□ -1.61
CSMD3-203ENST00000343508 NMD3Q96D46 503 aaKnown RBP5.01□□□□□ -1.61
CSMD3-203ENST00000343508 GORASP1Q9BQQ3 440 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 PALMDQ9NP74 551 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 MRC1P22897 1456 aa5.01□□□□□ -1.61
CSMD3-203ENST00000343508 WEE2P0C1S8 567 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 EPHB2P29323 1055 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 GIT2Q14161 759 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 GJB7Q6PEY0 223 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 NDUFAF2Q8N183 169 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 ZNF555Q8NEP9 628 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 NR1H4Q96RI1 486 aaPredicted RBP5□□□□□ -1.61
CSMD3-203ENST00000343508 APOL6Q9BWW8 343 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 KIAA1683Q9H0B3 1180 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 C10orf88Q9H8K7 445 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 GTSE1Q9NYZ3 720 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 CHMP2BQ9UQN3 213 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 TUBGCP6Q96RT7 1819 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 GSTA4O15217 222 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 ASNSP08243 561 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 ITGA4P13612 1032 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 CDK16Q00536 496 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 SFSWAPQ12872 951 aaKnown RBP5□□□□□ -1.61
CSMD3-203ENST00000343508 MAPK6Q16659 721 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 CCNJLQ8IV13 435 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 ZNF483Q8TF39 744 aaPredicted RBP5□□□□□ -1.61
CSMD3-203ENST00000343508 USP6NLQ92738 828 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 RMDN2Q96LZ7 410 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 TTYH3Q9C0H2 523 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 ZC3H7BQ9UGR2 993 aaKnown RBP5□□□□□ -1.61
CSMD3-203ENST00000343508 RCCD1A6NED2 376 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 ABHD2P08910 425 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 QPCTQ16769 361 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 SLC47A2Q86VL8 602 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 MED10Q9BTT4 135 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 NSMCE4AQ9NXX6 385 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 GLRA3O75311 464 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 MAPTP10636 758 aaKnown RBP5□□□□□ -1.61
CSMD3-203ENST00000343508 AQP5P55064 265 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 THEMIS2Q5TEJ8 643 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 MFSD5Q6N075 450 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 MPP4Q96JB8 637 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 CCDC28BQ9BUN5 200 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 KCNK4Q9NYG8 393 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 CDYLQ9Y232 598 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 INO80B-WBP1J3KQ70 363 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 DNM1LO00429 736 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 SORBS3O60504 671 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 THRAP10827 490 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 ENO3P13929 434 aaPredicted RBP5□□□□□ -1.61
CSMD3-203ENST00000343508 OVGP1Q12889 678 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 AASDHQ4L235 1098 aaPredicted RBP5□□□□□ -1.61
CSMD3-203ENST00000343508 GALNT4Q8N4A0 578 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 FBXO36Q8NEA4 188 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 ART4Q93070 314 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 CCDC126Q96EE4 140 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 PPP1R2P1Q96PQ5 205 aa5□□□□□ -1.61
CSMD3-203ENST00000343508 INO80BQ9C086 356 aaPredicted RBP5□□□□□ -1.61
CSMD3-203ENST00000343508 NGRNQ9NPE2 291 aaKnown RBP5□□□□□ -1.61
CSMD3-203ENST00000343508 PCMTD2Q9NV79 361 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms