RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 MAP2K7O14733 419 aa21.24■□□□□ 0.99
RTN1-202ENST00000342503 ADAMTS4O75173 837 aa21.24■□□□□ 0.99
RTN1-202ENST00000342503 CALB1P05937 261 aa21.24■□□□□ 0.99
RTN1-202ENST00000342503 PLA2G4AP47712 749 aa21.24■□□□□ 0.99
RTN1-202ENST00000342503 MRPS6P82932 125 aaKnown RBP21.24■□□□□ 0.99
RTN1-202ENST00000342503 C18orf25Q96B23 403 aaPredicted RBP21.24■□□□□ 0.99
RTN1-202ENST00000342503 TMEM176AQ96HP8 235 aa21.24■□□□□ 0.99
RTN1-202ENST00000342503 NAP1L3Q99457 506 aaPredicted RBP21.24■□□□□ 0.99
RTN1-202ENST00000342503 DDX47Q9H0S4 455 aaKnown RBP21.24■□□□□ 0.99
RTN1-202ENST00000342503 PPEF2O14830 753 aa21.24■□□□□ 0.99
RTN1-202ENST00000342503 PROSCO94903 275 aa21.24■□□□□ 0.99
RTN1-202ENST00000342503 GJB6O95452 261 aa21.24■□□□□ 0.99
RTN1-202ENST00000342503 CBX1P83916 185 aa21.24■□□□□ 0.99
RTN1-202ENST00000342503 PTPN11Q06124 597 aaPredicted RBP21.24■□□□□ 0.99
RTN1-202ENST00000342503 MYO1EQ12965 1108 aa21.24■□□□□ 0.99
RTN1-202ENST00000342503 CLUL1Q15846 466 aa21.24■□□□□ 0.99
RTN1-202ENST00000342503 DEFB115Q30KQ5 88 aa21.24■□□□□ 0.99
RTN1-202ENST00000342503 GLRA4Q5JXX5 417 aa21.24■□□□□ 0.99
RTN1-202ENST00000342503 SEL1L2Q5TEA6 688 aa21.24■□□□□ 0.99
RTN1-202ENST00000342503 FAM228AQ86W67 206 aa21.24■□□□□ 0.99
RTN1-202ENST00000342503 BEST2Q8NFU1 509 aa21.24■□□□□ 0.99
RTN1-202ENST00000342503 XPNPEP3Q9NQH7 507 aa21.24■□□□□ 0.99
RTN1-202ENST00000342503 GDF3Q9NR23 364 aa21.24■□□□□ 0.99
RTN1-202ENST00000342503 RNF19AQ9NV58 838 aa21.24■□□□□ 0.99
RTN1-202ENST00000342503 PARVAQ9NVD7 372 aa21.24■□□□□ 0.99
RTN1-202ENST00000342503 CEP83Q9Y592 693 aa21.24■□□□□ 0.99
RTN1-202ENST00000342503 PYGMP11217 842 aa21.23■□□□□ 0.99
RTN1-202ENST00000342503 ELNP15502 786 aa21.23■□□□□ 0.99
RTN1-202ENST00000342503 TNFRSF8P28908 595 aa21.23■□□□□ 0.99
RTN1-202ENST00000342503 SLC1A1P43005 524 aa21.23■□□□□ 0.99
RTN1-202ENST00000342503 RWDD2BP57060 319 aa21.23■□□□□ 0.99
RTN1-202ENST00000342503 GUCY2DQ02846 1103 aa21.23■□□□□ 0.99
RTN1-202ENST00000342503 FAM47CQ5HY64 1035 aa21.23■□□□□ 0.99
RTN1-202ENST00000342503 ADAT2Q7Z6V5 191 aaKnown RBP21.23■□□□□ 0.99
RTN1-202ENST00000342503 IFT20Q8IY31 132 aa21.23■□□□□ 0.99
RTN1-202ENST00000342503 KRT222Q8N1A0 295 aa21.23■□□□□ 0.99
RTN1-202ENST00000342503 FEZF2Q8TBJ5 459 aa21.23■□□□□ 0.99
RTN1-202ENST00000342503 LHX5Q9H2C1 402 aa21.23■□□□□ 0.99
RTN1-202ENST00000342503 RNF39Q9H2S5 420 aa21.23■□□□□ 0.99
RTN1-202ENST00000342503 KLK14Q9P0G3 267 aa21.23■□□□□ 0.99
RTN1-202ENST00000342503 NR2E1Q9Y466 385 aa21.23■□□□□ 0.99
RTN1-202ENST00000342503 TRPV2Q9Y5S1 764 aa21.23■□□□□ 0.99
RTN1-202ENST00000342503 CDY2AQ9Y6F7 541 aa21.23■□□□□ 0.99
RTN1-202ENST00000342503 ZSCAN5CA6NGD5 496 aaPredicted RBP21.22■□□□□ 0.99
RTN1-202ENST00000342503 TLR3O15455 904 aaKnown RBP21.22■□□□□ 0.99
RTN1-202ENST00000342503 SART1O43290 800 aaKnown RBP21.22■□□□□ 0.99
RTN1-202ENST00000342503 TOMM70O94826 608 aa21.22■□□□□ 0.99
RTN1-202ENST00000342503 PRKAR2AP13861 404 aaKnown RBP21.22■□□□□ 0.99
RTN1-202ENST00000342503 INCA1Q0VD86 236 aa21.22■□□□□ 0.99
RTN1-202ENST00000342503 CASP8Q14790 479 aa21.22■□□□□ 0.99
RTN1-202ENST00000342503 ERICH1Q86X53 443 aa21.22■□□□□ 0.99
RTN1-202ENST00000342503 AENQ8WTP8 325 aaKnown RBP21.22■□□□□ 0.99
RTN1-202ENST00000342503 WNT8BQ93098 351 aa21.22■□□□□ 0.99
RTN1-202ENST00000342503 EPB41L5Q9HCM4 733 aa21.22■□□□□ 0.99
RTN1-202ENST00000342503 PARP2Q9UGN5 583 aa21.22■□□□□ 0.99
RTN1-202ENST00000342503 BARX2Q9UMQ3 279 aaPredicted RBP21.22■□□□□ 0.99
RTN1-202ENST00000342503 TCRBV5S1A1TA0A578 114 aa21.21■□□□□ 0.99
RTN1-202ENST00000342503 M0QZ92 97 aa21.21■□□□□ 0.99
RTN1-202ENST00000342503 TNNT3P45378 269 aaPredicted RBP21.21■□□□□ 0.99
RTN1-202ENST00000342503 NDST1P52848 882 aa21.21■□□□□ 0.99
RTN1-202ENST00000342503 REM2Q8IYK8 340 aaPredicted RBP21.21■□□□□ 0.99
RTN1-202ENST00000342503 SLITRK6Q9H5Y7 841 aa21.21■□□□□ 0.99
RTN1-202ENST00000342503 UBQLN1Q9UMX0 589 aaKnown RBP21.21■□□□□ 0.99
RTN1-202ENST00000342503 IPPQ9Y573 584 aa21.21■□□□□ 0.99
RTN1-202ENST00000342503 MYCNP04198 464 aaPredicted RBP21.21■□□□□ 0.99
RTN1-202ENST00000342503 ASGR1P07306 291 aa21.21■□□□□ 0.99
RTN1-202ENST00000342503 VDRP11473 427 aa21.21■□□□□ 0.99
RTN1-202ENST00000342503 KCNA10Q16322 511 aa21.21■□□□□ 0.99
RTN1-202ENST00000342503 XKR4Q5GH76 650 aa21.21■□□□□ 0.99
RTN1-202ENST00000342503 DNAJC24Q6P3W2 148 aa21.21■□□□□ 0.99
RTN1-202ENST00000342503 RSPH3Q86UC2 560 aa21.21■□□□□ 0.99
RTN1-202ENST00000342503 SMG8Q8ND04 991 aaKnown RBP21.21■□□□□ 0.99
RTN1-202ENST00000342503 KLHDC9Q8NEP7 349 aa21.21■□□□□ 0.99
RTN1-202ENST00000342503 CASKIN2Q8WXE0 1202 aa21.21■□□□□ 0.99
RTN1-202ENST00000342503 HEXIM2Q96MH2 286 aaKnown RBP21.21■□□□□ 0.99
RTN1-202ENST00000342503 FAM124BQ9H5Z6 455 aaPredicted RBP21.21■□□□□ 0.99
RTN1-202ENST00000342503 ERVK-5Q9HDB9 667 aa21.21■□□□□ 0.99
RTN1-202ENST00000342503 CYTH4Q9UIA0 394 aa21.21■□□□□ 0.99
RTN1-202ENST00000342503 GOLGA6L10A0A0M3HER8 536 aa21.2■□□□□ 0.98
RTN1-202ENST00000342503 SMIM28A0A1B0GU29 152 aa21.2■□□□□ 0.98
RTN1-202ENST00000342503 ESYT3A0FGR9 886 aa21.2■□□□□ 0.98
RTN1-202ENST00000342503 MICAL2O94851 1124 aa21.2■□□□□ 0.98
RTN1-202ENST00000342503 CYP4A22Q5TCH4 519 aa21.2■□□□□ 0.98
RTN1-202ENST00000342503 DAB2IPQ5VWQ8 1189 aa21.2■□□□□ 0.98
RTN1-202ENST00000342503 C9orf57Q5W0N0 161 aa21.2■□□□□ 0.98
RTN1-202ENST00000342503 TTC39CQ8N584 583 aa21.2■□□□□ 0.98
RTN1-202ENST00000342503 LRRC52Q8N7C0 313 aa21.2■□□□□ 0.98
RTN1-202ENST00000342503 GDAP1L1Q96MZ0 367 aa21.2■□□□□ 0.98
RTN1-202ENST00000342503 SNX9Q9Y5X1 595 aa21.2■□□□□ 0.98
RTN1-202ENST00000342503 A0A0U1RQG5 324 aaPredicted RBP21.19■□□□□ 0.98
RTN1-202ENST00000342503 TMEM191CA6NGB0 347 aa21.19■□□□□ 0.98
RTN1-202ENST00000342503 KCNE1P15382 129 aa21.19■□□□□ 0.98
RTN1-202ENST00000342503 CARSP49589 748 aaKnown RBP21.19■□□□□ 0.98
RTN1-202ENST00000342503 RPL7AP62424 266 aaKnown RBP21.19■□□□□ 0.98
RTN1-202ENST00000342503 PTPN20Q4JDL3 420 aa21.19■□□□□ 0.98
RTN1-202ENST00000342503 TWF2Q6IBS0 349 aaKnown RBP21.19■□□□□ 0.98
RTN1-202ENST00000342503 SERINC5Q86VE9 423 aa21.19■□□□□ 0.98
RTN1-202ENST00000342503 SLC13A5Q86YT5 568 aaPredicted RBP21.19■□□□□ 0.98
RTN1-202ENST00000342503 CCDC26Q8TAB7 109 aa21.19■□□□□ 0.98
RTN1-202ENST00000342503 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms