RNA–Protein interactions for RNA: ENST00000341460.5

SYDE2-202, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYDE2, Length 5,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-202ENST00000341460 PASD1Q8IV76 773 aa18.39■□□□□ 0.53
SYDE2-202ENST00000341460 ERP44Q9BS26 406 aa18.39■□□□□ 0.53
SYDE2-202ENST00000341460 TMEM79Q9BSE2 394 aa18.39■□□□□ 0.53
SYDE2-202ENST00000341460 CYP27B1O15528 508 aa18.38■□□□□ 0.53
SYDE2-202ENST00000341460 PDE9AO76083 593 aa18.38■□□□□ 0.53
SYDE2-202ENST00000341460 PHKA2P46019 1235 aa18.38■□□□□ 0.53
SYDE2-202ENST00000341460 RWDD4Q6NW29 188 aaKnown RBP18.38■□□□□ 0.53
SYDE2-202ENST00000341460 FAM43BQ6ZT52 329 aaPredicted RBP18.38■□□□□ 0.53
SYDE2-202ENST00000341460 ARID3BQ8IVW6 561 aaPredicted RBP18.38■□□□□ 0.53
SYDE2-202ENST00000341460 BBS7Q8IWZ6 715 aa18.38■□□□□ 0.53
SYDE2-202ENST00000341460 USP38Q8NB14 1042 aa18.38■□□□□ 0.53
SYDE2-202ENST00000341460 ZNF184Q99676 751 aaPredicted RBP18.38■□□□□ 0.53
SYDE2-202ENST00000341460 CHID1Q9BWS9 393 aa18.38■□□□□ 0.53
SYDE2-202ENST00000341460 DDX56Q9NY93 547 aaKnown RBP18.38■□□□□ 0.53
SYDE2-202ENST00000341460 SMARCAL1Q9NZC9 954 aa18.38■□□□□ 0.53
SYDE2-202ENST00000341460 TMEM161AQ9NX61 479 aa18.38■□□□□ 0.53
SYDE2-202ENST00000341460 ABCB11O95342 1321 aa18.38■□□□□ 0.53
SYDE2-202ENST00000341460 ZNF862O60290 1169 aa18.38■□□□□ 0.53
SYDE2-202ENST00000341460 EPHA10Q5JZY3 1008 aa18.38■□□□□ 0.53
SYDE2-202ENST00000341460 LRRC6Q86X45 466 aa18.38■□□□□ 0.53
SYDE2-202ENST00000341460 NSUN6Q8TEA1 469 aaKnown RBP18.38■□□□□ 0.53
SYDE2-202ENST00000341460 C1orf50Q9BV19 199 aa18.38■□□□□ 0.53
SYDE2-202ENST00000341460 SPRTNQ9H040 489 aaPredicted RBP18.38■□□□□ 0.53
SYDE2-202ENST00000341460 ZNF335Q9H4Z2 1342 aaPredicted RBP18.38■□□□□ 0.53
SYDE2-202ENST00000341460 GOLGA8TH3BQL2 631 aa18.38■□□□□ 0.53
SYDE2-202ENST00000341460 RGS20O76081 388 aa18.38■□□□□ 0.53
SYDE2-202ENST00000341460 CALB1P05937 261 aa18.38■□□□□ 0.53
SYDE2-202ENST00000341460 NARS2Q96I59 477 aaKnown RBP18.38■□□□□ 0.53
SYDE2-202ENST00000341460 RAVER2Q9HCJ3 691 aaKnown RBP18.38■□□□□ 0.53
SYDE2-202ENST00000341460 FAM32AQ9Y421 112 aaKnown RBP18.38■□□□□ 0.53
SYDE2-202ENST00000341460 PNMA8CA0A1B0GUJ8 204 aa18.37■□□□□ 0.53
SYDE2-202ENST00000341460 TRIM13O60858 407 aa18.37■□□□□ 0.53
SYDE2-202ENST00000341460 ZNF200P98182 395 aaPredicted RBP18.37■□□□□ 0.53
SYDE2-202ENST00000341460 PUDPQ08623 228 aa18.37■□□□□ 0.53
SYDE2-202ENST00000341460 CYB5R4Q7L1T6 521 aa18.37■□□□□ 0.53
SYDE2-202ENST00000341460 REXO1L1PQ8IX06 675 aa18.37■□□□□ 0.53
SYDE2-202ENST00000341460 RIN3Q8TB24 985 aa18.37■□□□□ 0.53
SYDE2-202ENST00000341460 NEU2Q9Y3R4 380 aa18.37■□□□□ 0.53
SYDE2-202ENST00000341460 PRDM15P57071 1507 aaPredicted RBP18.37■□□□□ 0.53
SYDE2-202ENST00000341460 SSU72P8A0A1W2PR75 194 aa18.37■□□□□ 0.53
SYDE2-202ENST00000341460 PHGDHO43175 533 aaKnown RBP18.37■□□□□ 0.53
SYDE2-202ENST00000341460 PTK7Q13308 1070 aa18.37■□□□□ 0.53
SYDE2-202ENST00000341460 P3H1Q32P28 736 aa18.37■□□□□ 0.53
SYDE2-202ENST00000341460 APOL4Q9BPW4 351 aa18.37■□□□□ 0.53
SYDE2-202ENST00000341460 METTL5Q9NRN9 209 aaKnown RBP18.37■□□□□ 0.53
SYDE2-202ENST00000341460 IP6K2Q9UHH9 426 aa18.37■□□□□ 0.53
SYDE2-202ENST00000341460 KIF1BO60333 1816 aa18.37■□□□□ 0.53
SYDE2-202ENST00000341460 POTEFA5A3E0 1075 aa18.37■□□□□ 0.53
SYDE2-202ENST00000341460 TPST1O60507 370 aa18.37■□□□□ 0.53
SYDE2-202ENST00000341460 KCNMA1Q12791 1236 aa18.37■□□□□ 0.53
SYDE2-202ENST00000341460 FAM162AQ96A26 154 aa18.37■□□□□ 0.53
SYDE2-202ENST00000341460 OTULINQ96BN8 352 aa18.37■□□□□ 0.53
SYDE2-202ENST00000341460 PABPC3Q9H361 631 aaKnown RBP18.37■□□□□ 0.53
SYDE2-202ENST00000341460 TDRD3Q9H7E2 651 aaKnown RBP18.37■□□□□ 0.53
SYDE2-202ENST00000341460 ARHGEF3Q9NR81 526 aa18.37■□□□□ 0.53
SYDE2-202ENST00000341460 ASNSD1Q9NWL6 643 aa18.37■□□□□ 0.53
SYDE2-202ENST00000341460 PRELID1Q9Y255 219 aa18.37■□□□□ 0.53
SYDE2-202ENST00000341460 ECE2O60344 883 aa18.37■□□□□ 0.53
SYDE2-202ENST00000341460 NUP62P37198 522 aaPredicted RBP18.37■□□□□ 0.53
SYDE2-202ENST00000341460 SLC18A3Q16572 532 aa18.37■□□□□ 0.53
SYDE2-202ENST00000341460 DGUOKQ16854 277 aa18.37■□□□□ 0.53
SYDE2-202ENST00000341460 SLC27A3Q5K4L6 730 aa18.37■□□□□ 0.53
SYDE2-202ENST00000341460 ZHX2Q9Y6X8 837 aa18.37■□□□□ 0.53
SYDE2-202ENST00000341460 SPATA31A3Q5VYP0 1347 aa18.37■□□□□ 0.53
SYDE2-202ENST00000341460 CCDC130P13994 396 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 SFNP31947 248 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 GRM4Q14833 912 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 ZNF699Q32M78 642 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 C6orf10Q5SRN2 563 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 SNRNP48Q6IEG0 339 aaKnown RBP18.36■□□□□ 0.53
SYDE2-202ENST00000341460 AIPL1Q9NZN9 384 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 TAGLN3Q9UI15 199 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 OVGP1Q12889 678 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 YTHDF3Q7Z739 585 aaKnown RBP18.36■□□□□ 0.53
SYDE2-202ENST00000341460 UBASH3BQ8TF42 649 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 NDNQ99608 321 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 DCP1AQ9NPI6 582 aaPredicted RBP18.36■□□□□ 0.53
SYDE2-202ENST00000341460 CACNA2D2Q9NY47 1150 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 MYRFQ9Y2G1 1151 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 USP17L15C9J2P7 530 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 USP17L13C9JLJ4 530 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 USP17L11C9JVI0 530 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 USP17L18D6R9N7 530 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 USP17L22D6RA61 530 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 USP17L17D6RBQ6 530 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 USP17L19D6RCP7 530 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 USP17L20D6RJB6 530 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 ZNF263O14978 683 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 TCF3P15923 654 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 ZNF23P17027 643 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 CDH3P22223 829 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 USP17L24Q0WX57 530 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 RFX7Q2KHR2 1363 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 USP17L6PQ6QN14 398 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 KLHL17Q6TDP4 642 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 ZBTB49Q6ZSB9 765 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 PCMTD2Q9NV79 361 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 RRN3Q9NYV6 651 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 MROH7-TTC4A0A0A0MT08 1334 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 STX5Q13190 355 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms