RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 STXBP4Q6ZWJ1 553 aa3.81□□□□□ -1.8
CCDC66-202ENST00000341455 SLC24A5Q71RS6 500 aa3.81□□□□□ -1.8
CCDC66-202ENST00000341455 GPBP1Q86WP2 473 aa3.81□□□□□ -1.8
CCDC66-202ENST00000341455 ECHDC2Q86YB7 292 aa3.81□□□□□ -1.8
CCDC66-202ENST00000341455 ETFBKMTQ8IXQ9 262 aa3.81□□□□□ -1.8
CCDC66-202ENST00000341455 KIAA0895Q8NCT3 520 aa3.81□□□□□ -1.8
CCDC66-202ENST00000341455 SMG8Q8ND04 991 aaKnown RBP3.81□□□□□ -1.8
CCDC66-202ENST00000341455 GPT2Q8TD30 523 aa3.81□□□□□ -1.8
CCDC66-202ENST00000341455 CCDC34Q96HJ3 373 aa3.81□□□□□ -1.8
CCDC66-202ENST00000341455 CEP295NLQ96MC4 621 aa3.81□□□□□ -1.8
CCDC66-202ENST00000341455 CEP63Q96MT8 703 aa3.81□□□□□ -1.8
CCDC66-202ENST00000341455 CASD1Q96PB1 797 aa3.81□□□□□ -1.8
CCDC66-202ENST00000341455 PPP1R10Q96QC0 940 aaKnown RBP3.81□□□□□ -1.8
CCDC66-202ENST00000341455 MRPL4Q9BYD3 311 aaKnown RBP3.81□□□□□ -1.8
CCDC66-202ENST00000341455 DZANK1Q9NVP4 752 aa3.81□□□□□ -1.8
CCDC66-202ENST00000341455 HOOK1Q9UJC3 728 aaKnown RBP3.81□□□□□ -1.8
CCDC66-202ENST00000341455 EXOC7Q9UPT5 735 aa3.81□□□□□ -1.8
CCDC66-202ENST00000341455 NOC2LQ9Y3T9 749 aaKnown RBP3.81□□□□□ -1.8
CCDC66-202ENST00000341455 MIA3Q5JRA6 1907 aa3.81□□□□□ -1.8
CCDC66-202ENST00000341455 TNRC6BQ9UPQ9 1833 aaKnown RBP3.8□□□□□ -1.8
CCDC66-202ENST00000341455 ANO9A1A5B4 782 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 TGFB1I1O43294 461 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 OIP5O43482 229 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 MGEA5O60502 916 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 TOM1L1O75674 476 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 KIF20AO95235 890 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 IL18RAPO95256 599 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 MYCP01106 439 aaPredicted RBP3.8□□□□□ -1.8
CCDC66-202ENST00000341455 RPN1P04843 607 aaKnown RBP3.8□□□□□ -1.8
CCDC66-202ENST00000341455 CSF2RAP15509 400 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 MCM4P33991 863 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 RNF144AP50876 292 aaPredicted RBP3.8□□□□□ -1.8
CCDC66-202ENST00000341455 NPEPPSP55786 919 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 ZNF200P98182 395 aaPredicted RBP3.8□□□□□ -1.8
CCDC66-202ENST00000341455 FOXD4Q12950 439 aaPredicted RBP3.8□□□□□ -1.8
CCDC66-202ENST00000341455 SQSTM1Q13501 440 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 KRTAP21-3Q3LHN1 58 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 ZBTB8OSQ8IWT0 167 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 FSIP1Q8NA03 581 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 NOC3LQ8WTT2 800 aaKnown RBP3.8□□□□□ -1.8
CCDC66-202ENST00000341455 SCFD1Q8WVM8 642 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 DNAJB3Q8WWF6 145 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 PPP2R3CQ969Q6 453 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 MSANTD3Q96H12 275 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 SLC39A13Q96H72 371 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 LOXL4Q96JB6 756 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 IFT74Q96LB3 600 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 NECAB3Q96P71 396 aaPredicted RBP3.8□□□□□ -1.8
CCDC66-202ENST00000341455 ACCSQ96QU6 501 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 C11orf84Q9BUA3 381 aaPredicted RBP3.8□□□□□ -1.8
CCDC66-202ENST00000341455 MRPL9Q9BYD2 267 aaKnown RBP3.8□□□□□ -1.8
CCDC66-202ENST00000341455 HAPLN2Q9GZV7 340 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 DNAJC25Q9H1X3 360 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 S1PR5Q9H228 398 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 ASB7Q9H672 318 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 MINDY3Q9H8M7 445 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 AGO3Q9H9G7 860 aaKnown RBP3.8□□□□□ -1.8
CCDC66-202ENST00000341455 GOLGA2P5Q9HBQ8 144 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 ANKFY1Q9P2R3 1169 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 ADAMTS1Q9UHI8 967 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 SERTAD1Q9UHV2 236 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 MSRB2Q9Y3D2 182 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 C2CD2Q9Y426 696 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 IRAK3Q9Y616 596 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 DENND4CQ5VZ89 1909 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 M0QZ92 97 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 P4HA2O15460 535 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 POLR2DO15514 142 aaKnown RBP3.8□□□□□ -1.8
CCDC66-202ENST00000341455 LDHAP00338 332 aaKnown RBP3.8□□□□□ -1.8
CCDC66-202ENST00000341455 LMNAP02545 664 aaKnown RBP3.8□□□□□ -1.8
CCDC66-202ENST00000341455 NTRK1P04629 796 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 CYP11A1P05108 521 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 HSP90AA1P07900 732 aaKnown RBP3.8□□□□□ -1.8
CCDC66-202ENST00000341455 IL9P15248 144 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 BMP6P22004 513 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 MARCKSP29966 332 aaPredicted RBP3.8□□□□□ -1.8
CCDC66-202ENST00000341455 ME1P48163 572 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 GDF10P55107 478 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 PSMD6Q15008 389 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 SURF1Q15526 300 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 LINC01559Q495D7 138 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 MTERF2Q49AM1 385 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 CRELD2Q6UXH1 353 aaPredicted RBP3.8□□□□□ -1.8
CCDC66-202ENST00000341455 LRRC55Q6ZSA7 311 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 CEP57L1Q8IYX8 460 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 KIAA1958Q8N8K9 716 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 EPS8L3Q8TE67 593 aaKnown RBP3.8□□□□□ -1.8
CCDC66-202ENST00000341455 RELTQ969Z4 430 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 PGBD4Q96DM1 585 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 HERC2P3Q9BVR0 1158 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 KRTAP9-9Q9BYP9 154 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 KRTAP9-4Q9BYQ2 154 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 TMEM117Q9H0C3 514 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 CWH43Q9H720 699 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 SLC2A4RGQ9NR83 387 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 PANK4Q9NVE7 773 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 RWDD2AQ9UIY3 292 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 PADI3Q9ULW8 664 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 COQ4Q9Y3A0 265 aa3.8□□□□□ -1.8
CCDC66-202ENST00000341455 COMMD10Q9Y6G5 202 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms