RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 TEPSINQ96N21 525 aa12.5□□□□□ -0.41
RTN3-203ENST00000341307 FNBP1Q96RU3 617 aa12.5□□□□□ -0.41
RTN3-203ENST00000341307 RBM38Q9H0Z9 239 aaKnown RBP12.5□□□□□ -0.41
RTN3-203ENST00000341307 GBA3Q9H227 469 aa12.5□□□□□ -0.41
RTN3-203ENST00000341307 SEMA6BQ9H3T3 888 aa12.5□□□□□ -0.41
RTN3-203ENST00000341307 GGA3Q9NZ52 723 aa12.5□□□□□ -0.41
RTN3-203ENST00000341307 NR2E1Q9Y466 385 aa12.5□□□□□ -0.41
RTN3-203ENST00000341307 NUMBLQ9Y6R0 609 aa12.5□□□□□ -0.41
RTN3-203ENST00000341307 CYP3A7-CYP3A51PA0A087WV96 503 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 EXOC3O60645 756 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 PGM3O95394 542 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 FGFR4P22455 802 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 CYP3A7P24462 503 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 RPS12P25398 132 aaKnown RBP12.49□□□□□ -0.41
RTN3-203ENST00000341307 SREBF1P36956 1147 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 ACADVLP49748 655 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 PLTPP55058 493 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 SPIDRQ14159 915 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 CTC1Q2NKJ3 1217 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 CCDC153Q494R4 210 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 TAF1BQ53T94 588 aaPredicted RBP12.49□□□□□ -0.41
RTN3-203ENST00000341307 C1orf228Q6PIY5 440 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 PEX5LQ8IYB4 626 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 HEPHQ9BQS7 1158 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 FGFBP2Q9BYJ0 223 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 ATAD3AQ9NVI7 634 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 WDR90Q96KV7 1748 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 PITPNM2Q9BZ72 1349 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 ADM5C9JUS6 153 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 MATN2O00339 956 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 MSH4O15457 936 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 GSC2O15499 205 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 RIPK2O43353 540 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 ADCY3O60266 1144 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 TLR2O60603 784 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 SMIM18P0DKX4 95 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 MYCLP1P12525 358 aaPredicted RBP12.49□□□□□ -0.41
RTN3-203ENST00000341307 CPA3P15088 417 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 STX2P32856 288 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 NAA20P61599 178 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 PSMC6P62333 389 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 SPIRE1Q08AE8 756 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 TDRD12Q587J7 1177 aaKnown RBP12.49□□□□□ -0.41
RTN3-203ENST00000341307 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.49□□□□□ -0.411e-10■■■□□ 14.8
RTN3-203ENST00000341307 STMN2Q93045 179 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 NACC2Q96BF6 587 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 MBOAT7Q96N66 472 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 ZMAT2Q96NC0 199 aaKnown RBP12.49□□□□□ -0.41
RTN3-203ENST00000341307 MMRN2Q9H8L6 949 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 KCNK9Q9NPC2 374 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 CCPG1Q9ULG6 757 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 TELO2Q9Y4R8 837 aa12.49□□□□□ -0.41
RTN3-203ENST00000341307 DCTN3O75935 186 aa12.48□□□□□ -0.41
RTN3-203ENST00000341307 ASNSP08243 561 aa12.48□□□□□ -0.41
RTN3-203ENST00000341307 CCNE1P24864 410 aa12.48□□□□□ -0.41
RTN3-203ENST00000341307 ZNF76P36508 570 aa12.48□□□□□ -0.41
RTN3-203ENST00000341307 POLR2FP61218 127 aaKnown RBP12.48□□□□□ -0.41
RTN3-203ENST00000341307 HNRNPDQ14103 355 aaKnown RBP12.48□□□□□ -0.41
RTN3-203ENST00000341307 KRT72Q14CN4 511 aa12.48□□□□□ -0.41
RTN3-203ENST00000341307 LONRF1Q17RB8 773 aa12.48□□□□□ -0.41
RTN3-203ENST00000341307 CNNM4Q6P4Q7 775 aa12.48□□□□□ -0.41
RTN3-203ENST00000341307 CATSPER3Q86XQ3 398 aa12.48□□□□□ -0.41
RTN3-203ENST00000341307 SLC7A5P1Q8MH63 180 aa12.48□□□□□ -0.41
RTN3-203ENST00000341307 LRRC57Q8N9N7 239 aa12.48□□□□□ -0.41
RTN3-203ENST00000341307 GFM2Q969S9 779 aaKnown RBP12.48□□□□□ -0.41
RTN3-203ENST00000341307 ERP44Q9BS26 406 aa12.48□□□□□ -0.41
RTN3-203ENST00000341307 DRC3Q9H069 523 aa12.48□□□□□ -0.41
RTN3-203ENST00000341307 BHMT2Q9H2M3 363 aa12.48□□□□□ -0.41
RTN3-203ENST00000341307 TRPC7Q9HCX4 862 aa12.48□□□□□ -0.41
RTN3-203ENST00000341307 STXBP5LQ9Y2K9 1186 aa12.48□□□□□ -0.41
RTN3-203ENST00000341307 STARD13Q9Y3M8 1113 aa12.48□□□□□ -0.41
RTN3-203ENST00000341307 HBS1LQ9Y450 684 aaKnown RBP12.48□□□□□ -0.41
RTN3-203ENST00000341307 NOX1Q9Y5S8 564 aa12.48□□□□□ -0.41
RTN3-203ENST00000341307 SH3PXD2BA1X283 911 aa12.48□□□□□ -0.41
RTN3-203ENST00000341307 DYTNA2CJ06 578 aa12.48□□□□□ -0.41
RTN3-203ENST00000341307 AMPD1P23109 780 aa12.48□□□□□ -0.41
RTN3-203ENST00000341307 CCT8P50990 548 aa12.48□□□□□ -0.41
RTN3-203ENST00000341307 DMPKQ09013 629 aa12.48□□□□□ -0.41
RTN3-203ENST00000341307 ZNF394Q53GI3 561 aa12.48□□□□□ -0.41
RTN3-203ENST00000341307 METTL25Q8N6Q8 603 aa12.48□□□□□ -0.41
RTN3-203ENST00000341307 PRPF31Q8WWY3 499 aaKnown RBP12.48□□□□□ -0.41
RTN3-203ENST00000341307 DNAJC19Q96DA6 116 aa12.48□□□□□ -0.41
RTN3-203ENST00000341307 DOLKQ9UPQ8 538 aa12.48□□□□□ -0.41
RTN3-203ENST00000341307 PFASO15067 1338 aa12.47□□□□□ -0.41
RTN3-203ENST00000341307 CBFA2T3O75081 653 aa12.47□□□□□ -0.41
RTN3-203ENST00000341307 PLA2G4BP0C869 781 aa12.47□□□□□ -0.41
RTN3-203ENST00000341307 S100A1P23297 94 aa12.47□□□□□ -0.41
RTN3-203ENST00000341307 THOC5Q13769 683 aaKnown RBP12.47□□□□□ -0.41
RTN3-203ENST00000341307 LPIN1Q14693 890 aa12.47□□□□□ -0.41
RTN3-203ENST00000341307 SPDYAQ5MJ70 313 aa12.47□□□□□ -0.41
RTN3-203ENST00000341307 NBPF12Q5TAG4 269 aaPredicted RBP12.47□□□□□ -0.41
RTN3-203ENST00000341307 DEPDC1Q5TB30 811 aa12.47□□□□□ -0.41
RTN3-203ENST00000341307 LDHDQ86WU2 507 aa12.47□□□□□ -0.41
RTN3-203ENST00000341307 SLFN12Q8IYM2 578 aa12.47□□□□□ -0.41
RTN3-203ENST00000341307 PLEKHO2Q8TD55 490 aa12.47□□□□□ -0.41
RTN3-203ENST00000341307 CHURC1Q8WUH1 139 aa12.47□□□□□ -0.41
RTN3-203ENST00000341307 C10orf82Q8WW14 230 aa12.47□□□□□ -0.41
RTN3-203ENST00000341307 BHMTQ93088 406 aa12.47□□□□□ -0.41
RTN3-203ENST00000341307 NAP1L4Q99733 375 aaKnown RBP12.47□□□□□ -0.41
RTN3-203ENST00000341307 BTBD10Q9BSF8 475 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms