RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 SAMD3Q8N6K7 520 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 PRMT7Q9NVM4 692 aaPredicted RBP13.48□□□□□ -0.25
DNMT1-201ENST00000340748 PPP1R37O75864 691 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 HOXC6P09630 235 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 CDR2Q01850 454 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 GRIN1Q05586 938 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 RAPGEF5Q92565 580 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 PLEKHA5Q9HAU0 1116 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 USP2O75604 605 aaPredicted RBP13.48□□□□□ -0.25
DNMT1-201ENST00000340748 HLA-DRAP01903 254 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 INHAP05111 366 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 HSD17B4P51659 736 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 NSUN2Q08J23 767 aaKnown RBP eCLIP13.48□□□□□ -0.25
DNMT1-201ENST00000340748 GRB10Q13322 594 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 FAM110CQ1W6H9 321 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 P3H1Q32P28 736 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 CES5AQ6NT32 575 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 ZC3H18Q86VM9 953 aaKnown RBP13.48□□□□□ -0.25
DNMT1-201ENST00000340748 RIOX2Q8IUF8 465 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 FBXL16Q8N461 479 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 ARHGEF26Q96DR7 871 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 NRBF2Q96F24 287 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 DNAJC7Q99615 494 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 CENPKQ9BS16 269 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 TRABDQ9H4I3 376 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 MLXIPLQ9NP71 852 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 RBM12Q9NTZ6 932 aaKnown RBP13.48□□□□□ -0.25
DNMT1-201ENST00000340748 TRIM10Q9UDY6 481 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 L3MBTL1Q9Y468 752 aa13.48□□□□□ -0.25
DNMT1-201ENST00000340748 CCDC195A0A1B0GUA6 201 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 PPFIA2O75334 1257 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 KITP10721 976 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 TYK2P29597 1187 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 CTNNB1P35222 781 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 USP38Q8NB14 1042 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 ALKBH8Q96BT7 664 aaKnown RBP13.47□□□□□ -0.25
DNMT1-201ENST00000340748 DDX50Q9BQ39 737 aaKnown RBP13.47□□□□□ -0.25
DNMT1-201ENST00000340748 SUDS3Q9H7L9 328 aaPredicted RBP13.47□□□□□ -0.25
DNMT1-201ENST00000340748 RIC1Q4ADV7 1423 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 CD4P01730 458 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 CCDC157Q569K6 752 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 HP1BP3Q5SSJ5 553 aaPredicted RBP13.47□□□□□ -0.25
DNMT1-201ENST00000340748 STKLD1Q8NE28 680 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 TRIM51Q9BSJ1 452 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 MSH4O15457 936 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 KCNN4O15554 427 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 CDH16O75309 829 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 TPI1P60174 286 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 LRRC14Q15048 493 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 ATF7IP2Q5U623 682 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 C1orf146Q5VVC0 180 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 PID1Q7Z2X4 250 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 IFNL1Q8IU54 200 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 ROPN1BQ9BZX4 212 aaPredicted RBP13.47□□□□□ -0.25
DNMT1-201ENST00000340748 TMEM117Q9H0C3 514 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 ROPN1Q9HAT0 212 aaPredicted RBP13.47□□□□□ -0.25
DNMT1-201ENST00000340748 CREBZFQ9NS37 354 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 DCTN4Q9UJW0 460 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 VGLL3A8MV65 326 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 GNRH1P01148 92 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 VTNP04004 478 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 PDGFRAP16234 1089 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 KLRC1P26715 233 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 KLK7P49862 253 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 TTC30BQ8N4P2 665 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 SPDYE1Q8NFV5 336 aaPredicted RBP13.47□□□□□ -0.25
DNMT1-201ENST00000340748 DNAJB3Q8WWF6 145 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 ISCUQ9H1K1 167 aa13.47□□□□□ -0.25
DNMT1-201ENST00000340748 PIK3R2O00459 728 aa13.46□□□□□ -0.25
DNMT1-201ENST00000340748 MAP3K13O43283 966 aa13.46□□□□□ -0.25
DNMT1-201ENST00000340748 IRF1P10914 325 aa13.46□□□□□ -0.25
DNMT1-201ENST00000340748 PEX19P40855 299 aa13.46□□□□□ -0.25
DNMT1-201ENST00000340748 MORF4L2Q15014 288 aa13.46□□□□□ -0.25
DNMT1-201ENST00000340748 METTL7BQ6UX53 244 aa13.46□□□□□ -0.25
DNMT1-201ENST00000340748 WWP1Q9H0M0 922 aa13.46□□□□□ -0.25
DNMT1-201ENST00000340748 KLK14Q9P0G3 267 aa13.46□□□□□ -0.25
DNMT1-201ENST00000340748 SLC37A4O43826 429 aa13.46□□□□□ -0.25
DNMT1-201ENST00000340748 SETSIPP0DME0 302 aa13.46□□□□□ -0.25
DNMT1-201ENST00000340748 PRAMEP78395 509 aa13.46□□□□□ -0.25
DNMT1-201ENST00000340748 GUCY1A3Q02108 690 aa13.46□□□□□ -0.25
DNMT1-201ENST00000340748 CNTN2Q02246 1040 aa13.46□□□□□ -0.25
DNMT1-201ENST00000340748 GRIK4Q16099 956 aa13.46□□□□□ -0.25
DNMT1-201ENST00000340748 TREML2Q5T2D2 321 aa13.46□□□□□ -0.25
DNMT1-201ENST00000340748 SPATA21Q7Z572 469 aa13.46□□□□□ -0.25
DNMT1-201ENST00000340748 CCNYL1Q8N7R7 359 aa13.46□□□□□ -0.25
DNMT1-201ENST00000340748 ANKS1AQ92625 1134 aa13.46□□□□□ -0.25
DNMT1-201ENST00000340748 MCEEQ96PE7 176 aa13.46□□□□□ -0.25
DNMT1-201ENST00000340748 RBM15Q96T37 977 aaKnown RBP eCLIP13.46□□□□□ -0.259e-8■■■■■ 27.3
DNMT1-201ENST00000340748 GAS2O43903 313 aaKnown RBP13.46□□□□□ -0.25
DNMT1-201ENST00000340748 SPAG6O75602 509 aa13.46□□□□□ -0.25
DNMT1-201ENST00000340748 ALDH2P05091 517 aa13.46□□□□□ -0.25
DNMT1-201ENST00000340748 ACADSBP45954 432 aa13.46□□□□□ -0.25
DNMT1-201ENST00000340748 SERPINB9P50453 376 aa13.46□□□□□ -0.25
DNMT1-201ENST00000340748 AP2B1P63010 937 aa13.46□□□□□ -0.25
DNMT1-201ENST00000340748 MAPRE2Q15555 327 aa13.46□□□□□ -0.25
DNMT1-201ENST00000340748 PDCD2Q16342 344 aaPredicted RBP13.46□□□□□ -0.25
DNMT1-201ENST00000340748 JAMLQ86YT9 394 aa13.46□□□□□ -0.25
DNMT1-201ENST00000340748 BTBD6Q96KE9 485 aa13.46□□□□□ -0.25
DNMT1-201ENST00000340748 SLC13A1Q9BZW2 595 aa13.46□□□□□ -0.25
DNMT1-201ENST00000340748 UNC45AQ9H3U1 944 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms