RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 GPR182O15218 404 aa16.19■□□□□ 0.18
TUBB4B-201ENST00000340384 MEFVO15553 781 aaPredicted RBP16.19■□□□□ 0.18
TUBB4B-201ENST00000340384 ERLIN2O94905 339 aa16.19■□□□□ 0.18
TUBB4B-201ENST00000340384 ASS1P00966 412 aaKnown RBP16.19■□□□□ 0.18
TUBB4B-201ENST00000340384 RAG1P15918 1043 aa16.19■□□□□ 0.18
TUBB4B-201ENST00000340384 SYN1P17600 705 aa16.19■□□□□ 0.18
TUBB4B-201ENST00000340384 WNT7BP56706 349 aa16.19■□□□□ 0.18
TUBB4B-201ENST00000340384 PAK2Q13177 524 aa16.19■□□□□ 0.18
TUBB4B-201ENST00000340384 CCNI2Q6ZMN8 369 aaPredicted RBP16.19■□□□□ 0.18
TUBB4B-201ENST00000340384 CEP120Q8N960 986 aa16.19■□□□□ 0.18
TUBB4B-201ENST00000340384 OR5B17Q8NGF7 314 aa16.19■□□□□ 0.18
TUBB4B-201ENST00000340384 FAM212AQ96EL1 285 aa16.19■□□□□ 0.18
TUBB4B-201ENST00000340384 VIPAS39Q9H9C1 493 aa16.19■□□□□ 0.18
TUBB4B-201ENST00000340384 AVENQ9NQS1 362 aaPredicted RBP16.19■□□□□ 0.18
TUBB4B-201ENST00000340384 PIN4Q9Y237 131 aaKnown RBP16.19■□□□□ 0.18
TUBB4B-201ENST00000340384 ACO1P21399 889 aaKnown RBP16.18■□□□□ 0.18
TUBB4B-201ENST00000340384 TNFSF9P41273 254 aa16.18■□□□□ 0.18
TUBB4B-201ENST00000340384 NSFP46459 744 aaKnown RBP16.18■□□□□ 0.18
TUBB4B-201ENST00000340384 EPHB4P54760 987 aa16.18■□□□□ 0.18
TUBB4B-201ENST00000340384 SEZ6Q53EL9 994 aa16.18■□□□□ 0.18
TUBB4B-201ENST00000340384 LIN9Q5TKA1 542 aa16.18■□□□□ 0.18
TUBB4B-201ENST00000340384 DEFB128Q7Z7B8 93 aa16.18■□□□□ 0.18
TUBB4B-201ENST00000340384 ZNF564Q8TBZ8 553 aaPredicted RBP16.18■□□□□ 0.18
TUBB4B-201ENST00000340384 BADQ92934 168 aa16.18■□□□□ 0.18
TUBB4B-201ENST00000340384 HTATIP2Q9BUP3 242 aa16.18■□□□□ 0.18
TUBB4B-201ENST00000340384 NIF3L1Q9GZT8 377 aa16.18■□□□□ 0.18
TUBB4B-201ENST00000340384 CDT1Q9H211 546 aa16.18■□□□□ 0.18
TUBB4B-201ENST00000340384 EHD2Q9NZN4 543 aa16.18■□□□□ 0.18
TUBB4B-201ENST00000340384 TMEM59LQ9UK28 342 aa16.18■□□□□ 0.18
TUBB4B-201ENST00000340384 ANK1P16157 1881 aa16.17■□□□□ 0.18
TUBB4B-201ENST00000340384 GOLGA6L10A0A0M3HER8 536 aa16.17■□□□□ 0.18
TUBB4B-201ENST00000340384 TNRC18O15417 2968 aaPredicted RBP16.17■□□□□ 0.18
TUBB4B-201ENST00000340384 AXLP30530 894 aa16.17■□□□□ 0.18
TUBB4B-201ENST00000340384 GNA15P30679 374 aa16.17■□□□□ 0.18
TUBB4B-201ENST00000340384 TMEM192Q8IY95 271 aa16.17■□□□□ 0.18
TUBB4B-201ENST00000340384 THNSL1Q8IYQ7 743 aa16.17■□□□□ 0.18
TUBB4B-201ENST00000340384 RBBP8NLQ8NC74 664 aaPredicted RBP16.17■□□□□ 0.18
TUBB4B-201ENST00000340384 VCPIP1Q96JH7 1222 aa16.17■□□□□ 0.18
TUBB4B-201ENST00000340384 NUP85Q9BW27 656 aa16.17■□□□□ 0.18
TUBB4B-201ENST00000340384 PLVAPQ9BX97 442 aa16.17■□□□□ 0.18
TUBB4B-201ENST00000340384 MTMR12Q9C0I1 747 aa16.17■□□□□ 0.18
TUBB4B-201ENST00000340384 GOLPH3Q9H4A6 298 aa16.17■□□□□ 0.18
TUBB4B-201ENST00000340384 APOBEC3GQ9HC16 384 aaKnown RBP16.17■□□□□ 0.18
TUBB4B-201ENST00000340384 CHST12Q9NRB3 414 aa16.17■□□□□ 0.18
TUBB4B-201ENST00000340384 SMARCAL1Q9NZC9 954 aa16.17■□□□□ 0.18
TUBB4B-201ENST00000340384 CNOT8Q9UFF9 292 aaKnown RBP16.17■□□□□ 0.18
TUBB4B-201ENST00000340384 ZMYND8Q9ULU4 1186 aaPredicted RBP16.17■□□□□ 0.18
TUBB4B-201ENST00000340384 COG5Q9UP83 839 aa16.17■□□□□ 0.18
TUBB4B-201ENST00000340384 ALG6Q9Y672 507 aa16.17■□□□□ 0.18
TUBB4B-201ENST00000340384 DDX3YO15523 660 aaKnown RBP16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 UNGP13051 313 aaPredicted RBP16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 TNNT3P45378 269 aaPredicted RBP16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 TFAMQ00059 246 aaKnown RBP16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 CENPCQ03188 943 aa16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 CASP8Q14790 479 aa16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 SPOPLQ6IQ16 392 aa16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 NOTUMQ6P988 496 aa16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 TMEM270Q6UE05 265 aa16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 SMG8Q8ND04 991 aaKnown RBP16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 CCDC26Q8TAB7 109 aa16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 DPF3Q92784 378 aa16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 KRT12Q99456 494 aa16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 ADPGKQ9BRR6 497 aa16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 CXCL16Q9H2A7 254 aa16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 RNF39Q9H2S5 420 aa16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 SLITRK6Q9H5Y7 841 aa16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 LCMT1Q9UIC8 334 aa16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 NUB1Q9Y5A7 615 aa16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 CCDC66A2RUB6 948 aa16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 MEIS3P2A8K0S8 358 aa16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 KRIT1O00522 736 aa16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 SASH3O75995 380 aa16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 PARNO95453 639 aaKnown RBP16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 CYP1A1P04798 512 aaPredicted RBP16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 ACRP10323 421 aa16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 PLA2G4AP47712 749 aa16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 MESDQ14696 234 aa16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 ZNF699Q32M78 642 aa16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 SLC27A1Q6PCB7 646 aa16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 EMBQ6PCB8 327 aa16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 EIF1ADQ8N9N8 165 aaKnown RBP16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 ADAM2Q99965 735 aa16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 TRAIPQ9BWF2 469 aa16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 ASB7Q9H672 318 aa16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 ACP6Q9NPH0 428 aa16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 HES2Q9Y543 173 aa16.16■□□□□ 0.18
TUBB4B-201ENST00000340384 ENPP3O14638 875 aa16.15■□□□□ 0.18
TUBB4B-201ENST00000340384 THAP12O43422 761 aa16.15■□□□□ 0.18
TUBB4B-201ENST00000340384 HEXIM1O94992 359 aaKnown RBP16.15■□□□□ 0.18
TUBB4B-201ENST00000340384 NPTXRO95502 500 aa16.15■□□□□ 0.18
TUBB4B-201ENST00000340384 ATF7P17544 494 aaPredicted RBP16.15■□□□□ 0.18
TUBB4B-201ENST00000340384 CTNNA2P26232 953 aa16.15■□□□□ 0.18
TUBB4B-201ENST00000340384 RFC2P35250 354 aa16.15■□□□□ 0.18
TUBB4B-201ENST00000340384 GABPB1Q06547 395 aaPredicted RBP16.15■□□□□ 0.18
TUBB4B-201ENST00000340384 NNTQ13423 1086 aa16.15■□□□□ 0.18
TUBB4B-201ENST00000340384 SMC1AQ14683 1233 aaKnown RBP16.15■□□□□ 0.18
TUBB4B-201ENST00000340384 HSP90B2PQ58FF3 399 aa16.15■□□□□ 0.18
TUBB4B-201ENST00000340384 SEL1L2Q5TEA6 688 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms