RNA–Protein interactions for RNA: ENST00000340171.6

C3orf33-201, Transcript of chromosome 3 open reading frame 33, humanhuman

TSL 1 (best) BASIC

Gene C3orf33, Length 1,884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf33-201ENST00000340171 UBR7Q8N806 425 aa21.45■■□□□ 1.02
C3orf33-201ENST00000340171 LNX1Q8TBB1 728 aaPredicted RBP21.45■■□□□ 1.02
C3orf33-201ENST00000340171 MMS19Q96T76 1030 aa21.45■■□□□ 1.02
C3orf33-201ENST00000340171 MTIF3Q9H2K0 278 aaKnown RBP21.45■■□□□ 1.02
C3orf33-201ENST00000340171 TFR2Q9UP52 801 aa21.45■■□□□ 1.02
C3orf33-201ENST00000340171 GBF1Q92538 1859 aa21.45■■□□□ 1.02
C3orf33-201ENST00000340171 RAP1GAPP47736 663 aa21.44■■□□□ 1.02
C3orf33-201ENST00000340171 CLCNKBP51801 687 aa21.44■■□□□ 1.02
C3orf33-201ENST00000340171 KIF5AQ12840 1032 aa21.44■■□□□ 1.02
C3orf33-201ENST00000340171 C10orf76Q5T2E6 689 aa21.44■■□□□ 1.02
C3orf33-201ENST00000340171 HERC6Q8IVU3 1022 aa21.44■■□□□ 1.02
C3orf33-201ENST00000340171 SLC30A5Q8TAD4 765 aa21.44■■□□□ 1.02
C3orf33-201ENST00000340171 HASPINQ8TF76 798 aa21.44■■□□□ 1.02
C3orf33-201ENST00000340171 SMYD3Q9H7B4 428 aa21.44■■□□□ 1.02
C3orf33-201ENST00000340171 RCCD1A6NED2 376 aa21.43■■□□□ 1.02
C3orf33-201ENST00000340171 PIRO00625 290 aa21.43■■□□□ 1.02
C3orf33-201ENST00000340171 KRT86O43790 486 aa21.43■■□□□ 1.02
C3orf33-201ENST00000340171 TNNT1P13805 278 aa21.43■■□□□ 1.02
C3orf33-201ENST00000340171 CDH8P55286 799 aa21.43■■□□□ 1.02
C3orf33-201ENST00000340171 CDR2Q01850 454 aa21.43■■□□□ 1.02
C3orf33-201ENST00000340171 MLLT1Q03111 559 aaPredicted RBP21.43■■□□□ 1.02
C3orf33-201ENST00000340171 BTG3Q14201 252 aaPredicted RBP21.43■■□□□ 1.02
C3orf33-201ENST00000340171 RASIP1Q5U651 963 aa21.43■■□□□ 1.02
C3orf33-201ENST00000340171 FAM43BQ6ZT52 329 aaPredicted RBP21.43■■□□□ 1.02
C3orf33-201ENST00000340171 ZNF689Q96CS4 500 aaPredicted RBP21.43■■□□□ 1.02
C3orf33-201ENST00000340171 ZNF560Q96MR9 790 aa21.43■■□□□ 1.02
C3orf33-201ENST00000340171 FAM193BQ96PV7 902 aaPredicted RBP21.43■■□□□ 1.02
C3orf33-201ENST00000340171 SLC9A7Q96T83 725 aa21.43■■□□□ 1.02
C3orf33-201ENST00000340171 CYP3A43Q9HB55 503 aa21.43■■□□□ 1.02
C3orf33-201ENST00000340171 RC3H2Q9HBD1 1191 aaKnown RBP21.43■■□□□ 1.02
C3orf33-201ENST00000340171 LCHNA4D1U4 455 aa21.43■■□□□ 1.02
C3orf33-201ENST00000340171 INPPL1O15357 1258 aa21.43■■□□□ 1.02
C3orf33-201ENST00000340171 ABL1P00519 1130 aa21.43■■□□□ 1.02
C3orf33-201ENST00000340171 MMEP08473 750 aa21.43■■□□□ 1.02
C3orf33-201ENST00000340171 MYOGP15173 224 aa21.43■■□□□ 1.02
C3orf33-201ENST00000340171 GNA15P30679 374 aa21.43■■□□□ 1.02
C3orf33-201ENST00000340171 PNPLA4P41247 253 aa21.43■■□□□ 1.02
C3orf33-201ENST00000340171 ARHGAP25P42331 645 aa21.43■■□□□ 1.02
C3orf33-201ENST00000340171 ZNF394Q53GI3 561 aa21.43■■□□□ 1.02
C3orf33-201ENST00000340171 ZNF662Q6ZS27 426 aa21.43■■□□□ 1.02
C3orf33-201ENST00000340171 OLIG1Q8TAK6 271 aa21.43■■□□□ 1.02
C3orf33-201ENST00000340171 TSGA10Q9BZW7 698 aa21.43■■□□□ 1.02
C3orf33-201ENST00000340171 LACRTQ9GZZ8 138 aa21.43■■□□□ 1.02
C3orf33-201ENST00000340171 NRDE2Q9H7Z3 1164 aa21.43■■□□□ 1.02
C3orf33-201ENST00000340171 RNF216Q9NWF9 866 aaPredicted RBP21.43■■□□□ 1.02
C3orf33-201ENST00000340171 GUCA1BQ9UMX6 200 aa21.43■■□□□ 1.02
C3orf33-201ENST00000340171 PRG3Q9Y2Y8 225 aaPredicted RBP21.43■■□□□ 1.02
C3orf33-201ENST00000340171 SNX9Q9Y5X1 595 aa21.43■■□□□ 1.02
C3orf33-201ENST00000340171 NT5C1B-RDH14C9J2C7 533 aa21.42■■□□□ 1.02
C3orf33-201ENST00000340171 TLL1O43897 1013 aa21.42■■□□□ 1.02
C3orf33-201ENST00000340171 CALCAP01258 141 aa21.42■■□□□ 1.02
C3orf33-201ENST00000340171 CHRNB2P17787 502 aa21.42■■□□□ 1.02
C3orf33-201ENST00000340171 LRPAP1P30533 357 aa21.42■■□□□ 1.02
C3orf33-201ENST00000340171 OR1G1P47890 313 aa21.42■■□□□ 1.02
C3orf33-201ENST00000340171 TUSC3Q13454 348 aa21.42■■□□□ 1.02
C3orf33-201ENST00000340171 SPOUT1Q5T280 376 aaKnown RBP21.42■■□□□ 1.02
C3orf33-201ENST00000340171 ZNF677Q86XU0 584 aa21.42■■□□□ 1.02
C3orf33-201ENST00000340171 LRRC43Q8N309 656 aa21.42■■□□□ 1.02
C3orf33-201ENST00000340171 C3orf58Q8NDZ4 430 aa21.42■■□□□ 1.02
C3orf33-201ENST00000340171 DDX1Q92499 740 aaKnown RBP21.42■■□□□ 1.02
C3orf33-201ENST00000340171 SDCBP2Q9H190 292 aa21.42■■□□□ 1.02
C3orf33-201ENST00000340171 TRIM10Q9UDY6 481 aa21.42■■□□□ 1.02
C3orf33-201ENST00000340171 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.42■■□□□ 1.02
C3orf33-201ENST00000340171 CDH23Q9H251 3354 aa21.42■■□□□ 1.02
C3orf33-201ENST00000340171 KIAA1671Q9BY89 1806 aa21.42■■□□□ 1.02
C3orf33-201ENST00000340171 TMCO5BA8MYB1 307 aa21.41■■□□□ 1.02
C3orf33-201ENST00000340171 KIF2AO00139 706 aaPredicted RBP21.41■■□□□ 1.02
C3orf33-201ENST00000340171 TAF6P49848 677 aa21.41■■□□□ 1.02
C3orf33-201ENST00000340171 ZNF132P52740 706 aa21.41■■□□□ 1.02
C3orf33-201ENST00000340171 FMO1Q01740 532 aa21.41■■□□□ 1.02
C3orf33-201ENST00000340171 SMYD5Q6GMV2 418 aa21.41■■□□□ 1.02
C3orf33-201ENST00000340171 CHRDL2Q6WN34 429 aa21.41■■□□□ 1.02
C3orf33-201ENST00000340171 KANSL3Q9P2N6 904 aa21.41■■□□□ 1.02
C3orf33-201ENST00000340171 PUF60Q9UHX1 559 aaKnown RBP21.41■■□□□ 1.02
C3orf33-201ENST00000340171 PODXLO00592 558 aa21.41■■□□□ 1.02
C3orf33-201ENST00000340171 KIF5CO60282 957 aa21.41■■□□□ 1.02
C3orf33-201ENST00000340171 ITGB1P05556 798 aa21.41■■□□□ 1.02
C3orf33-201ENST00000340171 DSC1Q08554 894 aa21.41■■□□□ 1.02
C3orf33-201ENST00000340171 PALB2Q86YC2 1186 aa21.41■■□□□ 1.02
C3orf33-201ENST00000340171 COLGALT2Q8IYK4 626 aa21.41■■□□□ 1.02
C3orf33-201ENST00000340171 MRPL9Q9BYD2 267 aaKnown RBP21.41■■□□□ 1.02
C3orf33-201ENST00000340171 PDCL3Q9H2J4 239 aa21.41■■□□□ 1.02
C3orf33-201ENST00000340171 NENFQ9UMX5 172 aa21.41■■□□□ 1.02
C3orf33-201ENST00000340171 MRPL42Q9Y6G3 142 aaKnown RBP21.41■■□□□ 1.02
C3orf33-201ENST00000340171 KPNA7A9QM74 516 aa21.4■■□□□ 1.02
C3orf33-201ENST00000340171 PJA2O43164 708 aa21.4■■□□□ 1.02
C3orf33-201ENST00000340171 THAP12O43422 761 aa21.4■■□□□ 1.02
C3orf33-201ENST00000340171 TUBB4AP04350 444 aa21.4■■□□□ 1.02
C3orf33-201ENST00000340171 SV2CQ496J9 727 aa21.4■■□□□ 1.02
C3orf33-201ENST00000340171 TTC39CQ8N584 583 aa21.4■■□□□ 1.02
C3orf33-201ENST00000340171 PCDHB18PQ96TA0 734 aa21.4■■□□□ 1.02
C3orf33-201ENST00000340171 PACSIN1Q9BY11 444 aa21.4■■□□□ 1.02
C3orf33-201ENST00000340171 IRX2Q9BZI1 471 aaPredicted RBP21.4■■□□□ 1.02
C3orf33-201ENST00000340171 FAM124BQ9H5Z6 455 aaPredicted RBP21.4■■□□□ 1.02
C3orf33-201ENST00000340171 DUSP10Q9Y6W6 482 aa21.4■■□□□ 1.02
C3orf33-201ENST00000340171 CHD7Q9P2D1 2997 aa21.39■■□□□ 1.02
C3orf33-201ENST00000340171 CILPO75339 1184 aa21.39■■□□□ 1.02
C3orf33-201ENST00000340171 GNG11P61952 73 aa21.39■■□□□ 1.02
C3orf33-201ENST00000340171 ETF1P62495 437 aaKnown RBP21.39■■□□□ 1.02
C3orf33-201ENST00000340171 UPP1Q16831 310 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms