RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 L1RE1Q9UN81 338 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 PCDHA13Q9Y5I0 950 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 ATP8B3O60423 1300 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 RCCD1A6NED2 376 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 TMEM189-UBE2V1I3L0A0 370 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 CCP110O43303 1012 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 B3GAT3O94766 335 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 PAEPP09466 180 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 ACRP10323 421 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 TNFAIP3P21580 790 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 PAX3P23760 479 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 NDST1P52848 882 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 PDCL2Q8N4E4 241 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 APPL2Q8NEU8 664 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 TMEM176AQ96HP8 235 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 CYB561D2O14569 222 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 GABRDO14764 452 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 KIF4AO95239 1232 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 IPO7O95373 1038 aaKnown RBP8.35□□□□□ -1.07
TMC1-202ENST00000340019 ITGB1P05556 798 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 WARSP23381 471 aaKnown RBP8.35□□□□□ -1.07
TMC1-202ENST00000340019 ARHGAP25P42331 645 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 VAV2P52735 878 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 WDR5P61964 334 aaKnown RBP8.35□□□□□ -1.07
TMC1-202ENST00000340019 TIGD5Q53EQ6 642 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 C10orf76Q5T2E6 689 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 TAF3Q5VWG9 929 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 ALKBH5Q6P6C2 394 aaKnown RBP8.35□□□□□ -1.07
TMC1-202ENST00000340019 UNC93AQ86WB7 457 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 ZNF606Q8WXB4 792 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 TFAP2BQ92481 460 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 BADQ92934 168 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 SENP8Q96LD8 212 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 MRPL9Q9BYD2 267 aaKnown RBP8.35□□□□□ -1.07
TMC1-202ENST00000340019 NRDE2Q9H7Z3 1164 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 RC3H2Q9HBD1 1191 aaKnown RBP8.35□□□□□ -1.07
TMC1-202ENST00000340019 DNAJB4Q9UDY4 337 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 PRKAG2Q9UGJ0 569 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 TFR2Q9UP52 801 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 F8W810 466 aa8.34□□□□□ -1.07
TMC1-202ENST00000340019 M0QZQ0 153 aa8.34□□□□□ -1.07
TMC1-202ENST00000340019 PJA2O43164 708 aa8.34□□□□□ -1.07
TMC1-202ENST00000340019 HUS1O60921 280 aa8.34□□□□□ -1.07
TMC1-202ENST00000340019 ABL1P00519 1130 aa8.34□□□□□ -1.07
TMC1-202ENST00000340019 CYP1A1P04798 512 aaPredicted RBP8.34□□□□□ -1.07
TMC1-202ENST00000340019 CFHP08603 1231 aa8.34□□□□□ -1.07
TMC1-202ENST00000340019 ATXN8OSP0DMR3 200 aa8.34□□□□□ -1.07
TMC1-202ENST00000340019 GZMAP12544 262 aa8.34□□□□□ -1.07
TMC1-202ENST00000340019 UNGP13051 313 aaPredicted RBP8.34□□□□□ -1.07
TMC1-202ENST00000340019 DEFB103AP81534 67 aa8.34□□□□□ -1.07
TMC1-202ENST00000340019 PPIGQ13427 754 aaKnown RBP eCLIP8.34□□□□□ -1.07
TMC1-202ENST00000340019 COL13A1Q5TAT6 717 aaPredicted RBP8.34□□□□□ -1.07
TMC1-202ENST00000340019 C7orf61Q8IZ16 206 aa8.34□□□□□ -1.07
TMC1-202ENST00000340019 ADGRF2Q8IZF7 708 aa8.34□□□□□ -1.07
TMC1-202ENST00000340019 ZNF689Q96CS4 500 aaPredicted RBP8.34□□□□□ -1.07
TMC1-202ENST00000340019 NT5C1AQ9BXI3 368 aa8.34□□□□□ -1.07
TMC1-202ENST00000340019 LACRTQ9GZZ8 138 aa8.34□□□□□ -1.07
TMC1-202ENST00000340019 TAS2R14Q9NYV8 317 aa8.34□□□□□ -1.07
TMC1-202ENST00000340019 STXBP5LQ9Y2K9 1186 aa8.34□□□□□ -1.07
TMC1-202ENST00000340019 LAMA2P24043 3122 aaKnown RBP8.34□□□□□ -1.07
TMC1-202ENST00000340019 GOLGA6L9A6NEM1 432 aa8.34□□□□□ -1.07
TMC1-202ENST00000340019 THAP12O43422 761 aa8.34□□□□□ -1.07
TMC1-202ENST00000340019 AMHP03971 560 aa8.34□□□□□ -1.07
TMC1-202ENST00000340019 BRD2P25440 801 aaKnown RBP8.34□□□□□ -1.07
TMC1-202ENST00000340019 MAGEA1P43355 309 aa8.34□□□□□ -1.07
TMC1-202ENST00000340019 RNASELQ05823 741 aaKnown RBP8.34□□□□□ -1.07
TMC1-202ENST00000340019 FPGSQ05932 587 aa8.34□□□□□ -1.07
TMC1-202ENST00000340019 ORC1Q13415 861 aa8.34□□□□□ -1.07
TMC1-202ENST00000340019 CCDC122Q5T0U0 273 aa8.34□□□□□ -1.07
TMC1-202ENST00000340019 NYAP1Q6ZVC0 841 aa8.34□□□□□ -1.07
TMC1-202ENST00000340019 LRRC43Q8N309 656 aa8.34□□□□□ -1.07
TMC1-202ENST00000340019 ABHD8Q96I13 439 aa8.34□□□□□ -1.07
TMC1-202ENST00000340019 PACSIN1Q9BY11 444 aa8.34□□□□□ -1.07
TMC1-202ENST00000340019 ISCUQ9H1K1 167 aa8.34□□□□□ -1.07
TMC1-202ENST00000340019 HCSTQ9UBK5 93 aa8.34□□□□□ -1.07
TMC1-202ENST00000340019 PCDHGC3Q9UN70 934 aa8.34□□□□□ -1.07
TMC1-202ENST00000340019 VWA8A3KMH1 1905 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 TBKBP1A7MCY6 615 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 UPP2O95045 317 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 CYP11A1P05108 521 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 LMO2P25791 158 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 GNL1P36915 607 aaPredicted RBP8.33□□□□□ -1.08
TMC1-202ENST00000340019 EPHB4P54760 987 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 PAN2Q504Q3 1202 aaKnown RBP8.33□□□□□ -1.08
TMC1-202ENST00000340019 WSCD1Q658N2 575 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 OSTM1Q86WC4 334 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 CRYBG2Q8N1P7 616 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 TMEM86AQ8N2M4 240 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 SPATA18Q8TC71 538 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 SUSD3Q96L08 255 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 FAM193BQ96PV7 902 aaPredicted RBP8.33□□□□□ -1.08
TMC1-202ENST00000340019 TMEM175Q9BSA9 504 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 HTATIP2Q9BUP3 242 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 KIAA1257Q9ULG3 409 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 NRP1O14786 923 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 HCRTO43612 131 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 VDRP11473 427 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 CDH5P33151 784 aaPredicted RBP8.33□□□□□ -1.08
TMC1-202ENST00000340019 BRCC3P46736 316 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 OR1G1P47890 313 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms