RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 ADAMTS10Q9H324 1103 aa16.41■□□□□ 0.22
MBD1-203ENST00000339998 SLITRK6Q9H5Y7 841 aa16.41■□□□□ 0.22
MBD1-203ENST00000339998 AVENQ9NQS1 362 aaPredicted RBP16.41■□□□□ 0.22
MBD1-203ENST00000339998 A6NJR5 290 aa16.41■□□□□ 0.22
MBD1-203ENST00000339998 UNCXA6NJT0 531 aa16.41■□□□□ 0.22
MBD1-203ENST00000339998 GPR32O75388 356 aa16.41■□□□□ 0.22
MBD1-203ENST00000339998 TMEM132DQ14C87 1099 aa16.41■□□□□ 0.22
MBD1-203ENST00000339998 PTPN20Q4JDL3 420 aa16.41■□□□□ 0.22
MBD1-203ENST00000339998 PLEKHA7Q6IQ23 1121 aa16.41■□□□□ 0.22
MBD1-203ENST00000339998 PHF13Q86YI8 300 aaPredicted RBP16.41■□□□□ 0.22
MBD1-203ENST00000339998 FAM71BQ8TC56 605 aa16.41■□□□□ 0.22
MBD1-203ENST00000339998 HPDLQ96IR7 371 aa16.41■□□□□ 0.22
MBD1-203ENST00000339998 RNF39Q9H2S5 420 aa16.41■□□□□ 0.22
MBD1-203ENST00000339998 UTP11Q9Y3A2 253 aaKnown RBP16.41■□□□□ 0.22
MBD1-203ENST00000339998 GOLGA6L10A0A0M3HER8 536 aa16.41■□□□□ 0.22
MBD1-203ENST00000339998 PROSCO94903 275 aa16.41■□□□□ 0.22
MBD1-203ENST00000339998 KRT10P13645 584 aa16.41■□□□□ 0.22
MBD1-203ENST00000339998 IBSPP21815 317 aaPredicted RBP16.41■□□□□ 0.22
MBD1-203ENST00000339998 PTGIRP43119 386 aa16.41■□□□□ 0.22
MBD1-203ENST00000339998 FAM187BQ17R55 369 aa16.41■□□□□ 0.22
MBD1-203ENST00000339998 TTMPQ5BVD1 217 aa16.41■□□□□ 0.22
MBD1-203ENST00000339998 LIN9Q5TKA1 542 aa16.41■□□□□ 0.22
MBD1-203ENST00000339998 KAZNQ674X7 775 aa16.41■□□□□ 0.22
MBD1-203ENST00000339998 CCDC105Q8IYK2 499 aa16.41■□□□□ 0.22
MBD1-203ENST00000339998 TUBGCP4Q9UGJ1 667 aa16.41■□□□□ 0.22
MBD1-203ENST00000339998 RALAP11233 206 aa16.4■□□□□ 0.22
MBD1-203ENST00000339998 VPS41P49754 854 aa16.4■□□□□ 0.22
MBD1-203ENST00000339998 CRHR2Q13324 411 aa16.4■□□□□ 0.22
MBD1-203ENST00000339998 SURF1Q15526 300 aa16.4■□□□□ 0.22
MBD1-203ENST00000339998 SLC4A11Q8NBS3 891 aa16.4■□□□□ 0.22
MBD1-203ENST00000339998 CENPHQ9H3R5 247 aa16.4■□□□□ 0.22
MBD1-203ENST00000339998 RABEP2Q9H5N1 569 aa16.4■□□□□ 0.22
MBD1-203ENST00000339998 DPP3Q9NY33 737 aa16.4■□□□□ 0.22
MBD1-203ENST00000339998 CACNG4Q9UBN1 327 aa16.4■□□□□ 0.22
MBD1-203ENST00000339998 PHF2O75151 1096 aa16.4■□□□□ 0.22
MBD1-203ENST00000339998 F2P00734 622 aa16.4■□□□□ 0.22
MBD1-203ENST00000339998 IGFBP6P24592 240 aaPredicted RBP16.4■□□□□ 0.22
MBD1-203ENST00000339998 CTNNA2P26232 953 aa16.4■□□□□ 0.22
MBD1-203ENST00000339998 MFSD10Q14728 455 aa16.4■□□□□ 0.22
MBD1-203ENST00000339998 CFAP58Q5T655 872 aa16.4■□□□□ 0.22
MBD1-203ENST00000339998 IQCKQ8N0W5 287 aa16.4■□□□□ 0.22
MBD1-203ENST00000339998 JOSD2Q8TAC2 188 aa16.4■□□□□ 0.22
MBD1-203ENST00000339998 UHMK1Q8TAS1 419 aaKnown RBP16.4■□□□□ 0.22
MBD1-203ENST00000339998 FEZF2Q8TBJ5 459 aa16.4■□□□□ 0.22
MBD1-203ENST00000339998 FBXO25Q8TCJ0 367 aa16.4■□□□□ 0.22
MBD1-203ENST00000339998 CPXM1Q96SM3 734 aa16.4■□□□□ 0.22
MBD1-203ENST00000339998 ACBD3Q9H3P7 528 aa16.4■□□□□ 0.22
MBD1-203ENST00000339998 GOLGA2P5Q9HBQ8 144 aa16.4■□□□□ 0.22
MBD1-203ENST00000339998 SLC5A4Q9NY91 659 aa16.4■□□□□ 0.22
MBD1-203ENST00000339998 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.4■□□□□ 0.22
MBD1-203ENST00000339998 HSF2BPO75031 334 aa16.39■□□□□ 0.21
MBD1-203ENST00000339998 IL18RAPO95256 599 aa16.39■□□□□ 0.21
MBD1-203ENST00000339998 HOXD8P13378 290 aaPredicted RBP16.39■□□□□ 0.21
MBD1-203ENST00000339998 HSD17B3P37058 310 aa16.39■□□□□ 0.21
MBD1-203ENST00000339998 RPL21P46778 160 aaKnown RBP16.39■□□□□ 0.21
MBD1-203ENST00000339998 C17orf99Q6UX52 265 aa16.39■□□□□ 0.21
MBD1-203ENST00000339998 SESTD1Q86VW0 696 aa16.39■□□□□ 0.21
MBD1-203ENST00000339998 ERICH1Q86X53 443 aa16.39■□□□□ 0.21
MBD1-203ENST00000339998 IFNLR1Q8IU57 520 aaPredicted RBP16.39■□□□□ 0.21
MBD1-203ENST00000339998 UBLCP1Q8WVY7 318 aaPredicted RBP16.39■□□□□ 0.21
MBD1-203ENST00000339998 ERP44Q9BS26 406 aa16.39■□□□□ 0.21
MBD1-203ENST00000339998 BHMG1C9JSJ3 638 aaPredicted RBP16.39■□□□□ 0.21
MBD1-203ENST00000339998 CAP1Q01518 475 aa16.39■□□□□ 0.21
MBD1-203ENST00000339998 TRIM32Q13049 653 aa16.39■□□□□ 0.21
MBD1-203ENST00000339998 SMTNL2Q2TAL5 461 aa16.39■□□□□ 0.21
MBD1-203ENST00000339998 RAB6CQ53S08 254 aa16.39■□□□□ 0.21
MBD1-203ENST00000339998 DCUN1D2Q6PH85 259 aa16.39■□□□□ 0.21
MBD1-203ENST00000339998 IFNL1Q8IU54 200 aa16.39■□□□□ 0.21
MBD1-203ENST00000339998 RAB6CQ9H0N0 254 aa16.39■□□□□ 0.21
MBD1-203ENST00000339998 MED4Q9NPJ6 270 aa16.39■□□□□ 0.21
MBD1-203ENST00000339998 PLAAQ9Y263 795 aa16.39■□□□□ 0.21
MBD1-203ENST00000339998 ATP8A1Q9Y2Q0 1164 aa16.39■□□□□ 0.21
MBD1-203ENST00000339998 ZSWIM8A7E2V4 1837 aa16.39■□□□□ 0.21
MBD1-203ENST00000339998 TNPO2O14787 897 aaKnown RBP16.38■□□□□ 0.21
MBD1-203ENST00000339998 RFC1P35251 1148 aaPredicted RBP16.38■□□□□ 0.21
MBD1-203ENST00000339998 DHX9Q08211 1270 aaKnown RBP16.38■□□□□ 0.21
MBD1-203ENST00000339998 SGO2Q562F6 1265 aa16.38■□□□□ 0.21
MBD1-203ENST00000339998 KCNT1Q5JUK3 1230 aa16.38■□□□□ 0.21
MBD1-203ENST00000339998 DUPD1Q68J44 220 aa16.38■□□□□ 0.21
MBD1-203ENST00000339998 DNAJC24Q6P3W2 148 aa16.38■□□□□ 0.21
MBD1-203ENST00000339998 TMEM35BQ8NCS4 154 aa16.38■□□□□ 0.21
MBD1-203ENST00000339998 HAUS1Q96CS2 278 aa16.38■□□□□ 0.21
MBD1-203ENST00000339998 PIWIL1Q96J94 861 aaKnown RBP16.38■□□□□ 0.21
MBD1-203ENST00000339998 HEXIM2Q96MH2 286 aaKnown RBP16.38■□□□□ 0.21
MBD1-203ENST00000339998 NAP1L3Q99457 506 aaPredicted RBP16.38■□□□□ 0.21
MBD1-203ENST00000339998 ADPGKQ9BRR6 497 aa16.38■□□□□ 0.21
MBD1-203ENST00000339998 NME7Q9Y5B8 376 aa16.38■□□□□ 0.21
MBD1-203ENST00000339998 COL1A2P08123 1366 aa16.38■□□□□ 0.21
MBD1-203ENST00000339998 TULP2O00295 520 aa16.38■□□□□ 0.21
MBD1-203ENST00000339998 MYBL1P10243 752 aa16.38■□□□□ 0.21
MBD1-203ENST00000339998 CYP3A5P20815 502 aa16.38■□□□□ 0.21
MBD1-203ENST00000339998 COILP38432 576 aaPredicted RBP16.38■□□□□ 0.21
MBD1-203ENST00000339998 NDST1P52848 882 aa16.38■□□□□ 0.21
MBD1-203ENST00000339998 POU5F1BQ06416 359 aa16.38■□□□□ 0.21
MBD1-203ENST00000339998 C1QBPQ07021 282 aaKnown RBP16.38■□□□□ 0.21
MBD1-203ENST00000339998 RGMBQ6NW40 437 aa16.38■□□□□ 0.21
MBD1-203ENST00000339998 TRIM72Q6ZMU5 477 aa16.38■□□□□ 0.21
MBD1-203ENST00000339998 TRPV1Q8NER1 839 aa16.38■□□□□ 0.21
MBD1-203ENST00000339998 RUBCNQ92622 972 aa16.38■□□□□ 0.21
MBD1-203ENST00000339998 BCO2Q9BYV7 579 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms