RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 FMO1Q01740 532 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 PLOD1Q02809 727 aaPredicted RBP9.9□□□□□ -0.82
NECAP1-201ENST00000339754 TBL3Q12788 808 aaKnown RBP9.9□□□□□ -0.82
NECAP1-201ENST00000339754 ASPHQ12797 758 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 HSF5Q4G112 596 aaPredicted RBP9.9□□□□□ -0.82
NECAP1-201ENST00000339754 KLC3Q6P597 504 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 CCDC24Q8N4L8 307 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.9□□□□□ -0.82
NECAP1-201ENST00000339754 FAM172AQ8WUF8 416 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 PPP1R14BQ96C90 147 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 PRICKLE1Q96MT3 831 aaPredicted RBP9.9□□□□□ -0.82
NECAP1-201ENST00000339754 CATSPER2Q96P56 530 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 PSTPIP2Q9H939 334 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 GPCPD1Q9NPB8 672 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 CNTNAP4Q9C0A0 1308 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.9□□□□□ -0.82
NECAP1-201ENST00000339754 H3BRJ5 948 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 ALOX15BO15296 676 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 TBCAO75347 108 aaKnown RBP9.9□□□□□ -0.82
NECAP1-201ENST00000339754 GEMIN4P57678 1058 aaKnown RBP9.9□□□□□ -0.82
NECAP1-201ENST00000339754 PPP4CP60510 307 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 DLG4P78352 724 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 BFSP1Q12934 665 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 PRKD1Q15139 912 aaPredicted RBP9.9□□□□□ -0.82
NECAP1-201ENST00000339754 SLC15A2Q16348 729 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 UGT2A3Q6UWM9 527 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 CAPN12Q6ZSI9 719 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 AMIGO3Q86WK7 504 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 SLFN12Q8IYM2 578 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 ADGRF4Q8IZF3 695 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 BANPQ8N9N5 519 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 GLIS1Q8NBF1 620 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 ETNPPLQ8TBG4 499 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 CERKQ8TCT0 537 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 MZB1Q8WU39 189 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 CLMNQ96JQ2 1002 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 THTPAQ9BU02 230 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 RANBP17Q9H2T7 1088 aaKnown RBP9.9□□□□□ -0.82
NECAP1-201ENST00000339754 VPS37BQ9H9H4 285 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 C17orf75Q9HAS0 396 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 USP29Q9HBJ7 922 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 ZNF287Q9HBT7 754 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 AGPAT3Q9NRZ7 376 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 PSMC3IPQ9P2W1 217 aaPredicted RBP9.9□□□□□ -0.82
NECAP1-201ENST00000339754 FRMD4BQ9Y2L6 1034 aa9.9□□□□□ -0.82
NECAP1-201ENST00000339754 ATRNL1Q5VV63 1379 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 USP17L15C9J2P7 530 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 USP17L13C9JLJ4 530 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 USP17L11C9JVI0 530 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 USP17L18D6R9N7 530 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 USP17L22D6RA61 530 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 USP17L17D6RBQ6 530 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 USP17L19D6RCP7 530 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 USP17L20D6RJB6 530 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 FKBP6O75344 327 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 TFAP2AP05549 437 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 SMIM18P0DKX4 95 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 SNHG28P0DPA3 235 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 FDX1P10109 184 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 MYL2P10916 166 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 RALAP11233 206 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 GAP43P17677 238 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 ADARP55265 1226 aaKnown RBP9.89□□□□□ -0.83
NECAP1-201ENST00000339754 USP17L24Q0WX57 530 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 DLG1Q12959 904 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 ASPRV1Q53RT3 343 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 EFHC2Q5JST6 749 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 RINT1Q6NUQ1 792 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 USP17L6PQ6QN14 398 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 B3GNT6Q6ZMB0 384 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 ALYREFQ86V81 257 aaKnown RBP9.89□□□□□ -0.83
NECAP1-201ENST00000339754 SLC47A2Q86VL8 602 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 TXNRD3Q86VQ6 643 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 FAM71AQ8IYT1 594 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 ZBTB8BQ8NAP8 495 aaPredicted RBP9.89□□□□□ -0.83
NECAP1-201ENST00000339754 CELF1Q92879 486 aaKnown RBP9.89□□□□□ -0.83
NECAP1-201ENST00000339754 VTI1AQ96AJ9 217 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 FIZ1Q96SL8 496 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 S100A14Q9HCY8 104 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 LAMB2P55268 1798 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 DDX60LQ5H9U9 1706 aaKnown RBP9.89□□□□□ -0.83
NECAP1-201ENST00000339754 FAM237BA0A1B0GVD1 139 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 DNALI1O14645 258 aaPredicted RBP9.89□□□□□ -0.83
NECAP1-201ENST00000339754 TM9SF1O15321 606 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 CYP26A1O43174 497 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 RPS6KA4O75676 772 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 CIB2O75838 187 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 DHRS4L1P0CG22 281 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 SLC1A1P43005 524 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 GPX6P59796 221 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 SF3B3Q15393 1217 aaKnown RBP9.89□□□□□ -0.83
NECAP1-201ENST00000339754 GRIK5Q16478 980 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 LRRC36Q1X8D7 754 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 LPCAT4Q643R3 524 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 AAGABQ6PD74 315 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 RBM44Q6ZP01 1051 aaKnown RBP9.89□□□□□ -0.83
NECAP1-201ENST00000339754 SLC25A41Q8N5S1 370 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 RDH13Q8NBN7 331 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 ERMNQ8TAM6 284 aa9.89□□□□□ -0.83
NECAP1-201ENST00000339754 SHKBP1Q8TBC3 707 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms