RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 PYGMP11217 842 aa19.88■□□□□ 0.77
PSPC1-201ENST00000338910 BRAFP15056 766 aa19.88■□□□□ 0.77
PSPC1-201ENST00000338910 STAT5BP51692 787 aa19.88■□□□□ 0.77
PSPC1-201ENST00000338910 STRN3Q13033 797 aa19.88■□□□□ 0.77
PSPC1-201ENST00000338910 SIX1Q15475 284 aaPredicted RBP19.88■□□□□ 0.77
PSPC1-201ENST00000338910 FBXL13Q8NEE6 735 aa19.88■□□□□ 0.77
PSPC1-201ENST00000338910 FBF1Q8TES7 1133 aa19.88■□□□□ 0.77
PSPC1-201ENST00000338910 MAGEB18Q96M61 343 aa19.88■□□□□ 0.77
PSPC1-201ENST00000338910 RPS6KC1Q96S38 1066 aa19.88■□□□□ 0.77
PSPC1-201ENST00000338910 MMP19Q99542 508 aa19.88■□□□□ 0.77
PSPC1-201ENST00000338910 LRMDAQ9H2I8 198 aa19.88■□□□□ 0.77
PSPC1-201ENST00000338910 TXLNGQ9NUQ3 528 aa19.88■□□□□ 0.77
PSPC1-201ENST00000338910 RAB20Q9NX57 234 aa19.88■□□□□ 0.77
PSPC1-201ENST00000338910 CTTNBP2NLQ9P2B4 639 aa19.88■□□□□ 0.77
PSPC1-201ENST00000338910 GARTP22102 1010 aa19.88■□□□□ 0.77
PSPC1-201ENST00000338910 CALB2P22676 271 aa19.88■□□□□ 0.77
PSPC1-201ENST00000338910 KCNJ1P48048 391 aa19.88■□□□□ 0.77
PSPC1-201ENST00000338910 CALCOCO2Q13137 446 aa19.88■□□□□ 0.77
PSPC1-201ENST00000338910 THEMIS2Q5TEJ8 643 aa19.88■□□□□ 0.77
PSPC1-201ENST00000338910 LMBRD2Q68DH5 695 aaPredicted RBP19.88■□□□□ 0.77
PSPC1-201ENST00000338910 ANO7Q6IWH7 933 aa19.88■□□□□ 0.77
PSPC1-201ENST00000338910 DEPTORQ8TB45 409 aa19.88■□□□□ 0.77
PSPC1-201ENST00000338910 PI4K2AQ9BTU6 479 aa19.88■□□□□ 0.77
PSPC1-201ENST00000338910 ARID2Q68CP9 1835 aa19.88■□□□□ 0.77
PSPC1-201ENST00000338910 E7ENQ6 273 aa19.87■□□□□ 0.77
PSPC1-201ENST00000338910 K7ERI5 159 aa19.87■□□□□ 0.77
PSPC1-201ENST00000338910 SOCS7O14512 581 aa19.87■□□□□ 0.77
PSPC1-201ENST00000338910 AHCYL1O43865 530 aa19.87■□□□□ 0.77
PSPC1-201ENST00000338910 PEX11AO75192 247 aa19.87■□□□□ 0.77
PSPC1-201ENST00000338910 FTLP02792 175 aaPredicted RBP19.87■□□□□ 0.77
PSPC1-201ENST00000338910 STX2P32856 288 aa19.87■□□□□ 0.77
PSPC1-201ENST00000338910 TCF7P36402 384 aaPredicted RBP19.87■□□□□ 0.77
PSPC1-201ENST00000338910 ACOT2P49753 483 aa19.87■□□□□ 0.77
PSPC1-201ENST00000338910 MFAP3P55082 362 aa19.87■□□□□ 0.77
PSPC1-201ENST00000338910 MCCD1P59942 119 aaPredicted RBP19.87■□□□□ 0.77
PSPC1-201ENST00000338910 SLC47A2Q86VL8 602 aa19.87■□□□□ 0.77
PSPC1-201ENST00000338910 SLC13A5Q86YT5 568 aaPredicted RBP19.87■□□□□ 0.77
PSPC1-201ENST00000338910 C12orf50Q8NA57 414 aaPredicted RBP19.87■□□□□ 0.77
PSPC1-201ENST00000338910 GRAMD1AQ96CP6 724 aa19.87■□□□□ 0.77
PSPC1-201ENST00000338910 ZBTB45Q96K62 511 aaPredicted RBP19.87■□□□□ 0.77
PSPC1-201ENST00000338910 NIFKQ9BYG3 293 aaKnown RBP19.87■□□□□ 0.77
PSPC1-201ENST00000338910 ZMYND8Q9ULU4 1186 aaPredicted RBP19.87■□□□□ 0.77
PSPC1-201ENST00000338910 COQ4Q9Y3A0 265 aa19.87■□□□□ 0.77
PSPC1-201ENST00000338910 DPPA5A6NC42 116 aa19.87■□□□□ 0.77
PSPC1-201ENST00000338910 H0YCG3 227 aa19.87■□□□□ 0.77
PSPC1-201ENST00000338910 ARIH2O95376 493 aa19.87■□□□□ 0.77
PSPC1-201ENST00000338910 COMTP21964 271 aa19.87■□□□□ 0.77
PSPC1-201ENST00000338910 CTCFP49711 727 aaPredicted RBP19.87■□□□□ 0.77
PSPC1-201ENST00000338910 CMPK2Q5EBM0 449 aa19.87■□□□□ 0.77
PSPC1-201ENST00000338910 RHBDF2Q6PJF5 856 aa19.87■□□□□ 0.77
PSPC1-201ENST00000338910 USP37Q86T82 979 aa19.87■□□□□ 0.77
PSPC1-201ENST00000338910 FAM71AQ8IYT1 594 aa19.87■□□□□ 0.77
PSPC1-201ENST00000338910 HELQQ8TDG4 1101 aa19.87■□□□□ 0.77
PSPC1-201ENST00000338910 CD101Q93033 1021 aa19.87■□□□□ 0.77
PSPC1-201ENST00000338910 VTI1AQ96AJ9 217 aa19.87■□□□□ 0.77
PSPC1-201ENST00000338910 NRBP2Q9NSY0 501 aa19.87■□□□□ 0.77
PSPC1-201ENST00000338910 MTUS1Q9ULD2 1270 aa19.87■□□□□ 0.77
PSPC1-201ENST00000338910 TMEM110-MUSTN1A8MSY1 372 aa19.86■□□□□ 0.77
PSPC1-201ENST00000338910 TGFB3P10600 412 aa19.86■□□□□ 0.77
PSPC1-201ENST00000338910 ARL2P36404 184 aa19.86■□□□□ 0.77
PSPC1-201ENST00000338910 GPC3P51654 580 aa19.86■□□□□ 0.77
PSPC1-201ENST00000338910 TRIM68Q6AZZ1 485 aa19.86■□□□□ 0.77
PSPC1-201ENST00000338910 NOP9Q86U38 636 aaKnown RBP19.86■□□□□ 0.77
PSPC1-201ENST00000338910 RNF217Q8TC41 542 aa19.86■□□□□ 0.77
PSPC1-201ENST00000338910 SEPT1Q8WYJ6 367 aa19.86■□□□□ 0.77
PSPC1-201ENST00000338910 NT5C1BQ96P26 610 aa19.86■□□□□ 0.77
PSPC1-201ENST00000338910 PCDHB18PQ96TA0 734 aa19.86■□□□□ 0.77
PSPC1-201ENST00000338910 WHRNQ9P202 907 aa19.86■□□□□ 0.77
PSPC1-201ENST00000338910 DNAJC25-GNG10A0A024R161 153 aa19.86■□□□□ 0.77
PSPC1-201ENST00000338910 EIF4E1BA6NMX2 242 aaKnown RBP19.86■□□□□ 0.77
PSPC1-201ENST00000338910 ABLIM1O14639 778 aa19.86■□□□□ 0.77
PSPC1-201ENST00000338910 SNUPNO95149 360 aaKnown RBP19.86■□□□□ 0.77
PSPC1-201ENST00000338910 ECEL1O95672 775 aa19.86■□□□□ 0.77
PSPC1-201ENST00000338910 TPBGLP0DKB5 382 aa19.86■□□□□ 0.77
PSPC1-201ENST00000338910 TAC1P20366 129 aa19.86■□□□□ 0.77
PSPC1-201ENST00000338910 MARK3P27448 753 aa19.86■□□□□ 0.77
PSPC1-201ENST00000338910 STK32AQ8WU08 396 aa19.86■□□□□ 0.77
PSPC1-201ENST00000338910 ZNF516Q92618 1163 aa19.86■□□□□ 0.77
PSPC1-201ENST00000338910 DHX38Q92620 1227 aaKnown RBP19.86■□□□□ 0.77
PSPC1-201ENST00000338910 WNT8AQ9H1J5 351 aa19.86■□□□□ 0.77
PSPC1-201ENST00000338910 CHORDC1Q9UHD1 332 aaPredicted RBP19.86■□□□□ 0.77
PSPC1-201ENST00000338910 EXTL3O43909 919 aa19.85■□□□□ 0.77
PSPC1-201ENST00000338910 TCEA3O75764 348 aa19.85■□□□□ 0.77
PSPC1-201ENST00000338910 UPP2O95045 317 aa19.85■□□□□ 0.77
PSPC1-201ENST00000338910 TTC4O95801 387 aa19.85■□□□□ 0.77
PSPC1-201ENST00000338910 PECAM1P16284 738 aaPredicted RBP19.85■□□□□ 0.77
PSPC1-201ENST00000338910 CHRNB2P17787 502 aa19.85■□□□□ 0.77
PSPC1-201ENST00000338910 GM2AP17900 193 aa19.85■□□□□ 0.77
PSPC1-201ENST00000338910 CHKAP35790 457 aa19.85■□□□□ 0.77
PSPC1-201ENST00000338910 NAMPTP43490 491 aa19.85■□□□□ 0.77
PSPC1-201ENST00000338910 WNT7BP56706 349 aa19.85■□□□□ 0.77
PSPC1-201ENST00000338910 NLRP11P59045 1033 aaKnown RBP19.85■□□□□ 0.77
PSPC1-201ENST00000338910 RBBP5Q15291 538 aaKnown RBP19.85■□□□□ 0.77
PSPC1-201ENST00000338910 ARHGEF18Q6ZSZ5 1173 aa19.85■□□□□ 0.77
PSPC1-201ENST00000338910 AGGF1Q8N302 714 aaeCLIP19.85■□□□□ 0.77
PSPC1-201ENST00000338910 EPS8L1Q8TE68 723 aa19.85■□□□□ 0.77
PSPC1-201ENST00000338910 SHC3Q92529 594 aa19.85■□□□□ 0.77
PSPC1-201ENST00000338910 TARS2Q9BW92 718 aaKnown RBP19.85■□□□□ 0.77
PSPC1-201ENST00000338910 HAPLN2Q9GZV7 340 aa19.85■□□□□ 0.77
PSPC1-201ENST00000338910 MYLK2Q9H1R3 596 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms