RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 GPR142Q7Z601 462 aa24.51■■□□□ 1.51
CLPTM1-201ENST00000337392 FEZF2Q8TBJ5 459 aa24.51■■□□□ 1.51
CLPTM1-201ENST00000337392 ANKRD36BP1Q96IX9 119 aa24.51■■□□□ 1.51
CLPTM1-201ENST00000337392 DDX23Q9BUQ8 820 aaKnown RBP24.51■■□□□ 1.51
CLPTM1-201ENST00000337392 FAM187AA6NFU0 413 aa24.51■■□□□ 1.51
CLPTM1-201ENST00000337392 SHOX2O60902 331 aaPredicted RBP24.51■■□□□ 1.51
CLPTM1-201ENST00000337392 TNNC2P02585 160 aa24.51■■□□□ 1.51
CLPTM1-201ENST00000337392 PMS2P54278 862 aa24.51■■□□□ 1.51
CLPTM1-201ENST00000337392 IFFO1Q0D2I5 559 aa24.51■■□□□ 1.51
CLPTM1-201ENST00000337392 SF3A3Q12874 501 aaKnown RBP eCLIP24.51■■□□□ 1.51
CLPTM1-201ENST00000337392 SLC10A6Q3KNW5 377 aa24.51■■□□□ 1.51
CLPTM1-201ENST00000337392 PTPN20Q4JDL3 420 aa24.51■■□□□ 1.51
CLPTM1-201ENST00000337392 NPLOC4Q8TAT6 608 aa24.51■■□□□ 1.51
CLPTM1-201ENST00000337392 BCAS4Q8TDM0 211 aa24.51■■□□□ 1.51
CLPTM1-201ENST00000337392 RASAL2Q9UJF2 1139 aa24.51■■□□□ 1.51
CLPTM1-201ENST00000337392 PPFIA2O75334 1257 aa24.5■■□□□ 1.51
CLPTM1-201ENST00000337392 ECEL1O95672 775 aa24.5■■□□□ 1.51
CLPTM1-201ENST00000337392 GH1P01241 217 aa24.5■■□□□ 1.51
CLPTM1-201ENST00000337392 CCT5P48643 541 aa24.5■■□□□ 1.51
CLPTM1-201ENST00000337392 LACTBP83111 547 aaPredicted RBP24.5■■□□□ 1.51
CLPTM1-201ENST00000337392 CYP1B1Q16678 543 aa24.5■■□□□ 1.51
CLPTM1-201ENST00000337392 MARCH8Q5T0T0 291 aa24.5■■□□□ 1.51
CLPTM1-201ENST00000337392 CD302Q8IX05 232 aa24.5■■□□□ 1.51
CLPTM1-201ENST00000337392 JOSD2Q8TAC2 188 aa24.5■■□□□ 1.51
CLPTM1-201ENST00000337392 POLR2BP30876 1174 aaKnown RBP24.5■■□□□ 1.51
CLPTM1-201ENST00000337392 MAGOHP61326 146 aaKnown RBP24.5■■□□□ 1.51
CLPTM1-201ENST00000337392 RAB6CQ53S08 254 aa24.5■■□□□ 1.51
CLPTM1-201ENST00000337392 DCUN1D2Q6PH85 259 aa24.5■■□□□ 1.51
CLPTM1-201ENST00000337392 RAB6CQ9H0N0 254 aa24.5■■□□□ 1.51
CLPTM1-201ENST00000337392 KAT6AQ92794 2004 aa24.5■■□□□ 1.51
CLPTM1-201ENST00000337392 PLXNB2O15031 1838 aa24.5■■□□□ 1.51
CLPTM1-201ENST00000337392 GOLGA6L10A6NI86 522 aa24.49■■□□□ 1.51
CLPTM1-201ENST00000337392 MYBL1P10243 752 aa24.49■■□□□ 1.51
CLPTM1-201ENST00000337392 ODF2Q5BJF6 829 aa24.49■■□□□ 1.51
CLPTM1-201ENST00000337392 MDM1Q8TC05 714 aa24.49■■□□□ 1.51
CLPTM1-201ENST00000337392 CPA4Q9UI42 421 aa24.49■■□□□ 1.51
CLPTM1-201ENST00000337392 TNFSF13BQ9Y275 285 aa24.49■■□□□ 1.51
CLPTM1-201ENST00000337392 ZSCAN5DPP0CG00 497 aa24.49■■□□□ 1.51
CLPTM1-201ENST00000337392 ETS1P14921 441 aa24.49■■□□□ 1.51
CLPTM1-201ENST00000337392 RFC1P35251 1148 aaPredicted RBP24.49■■□□□ 1.51
CLPTM1-201ENST00000337392 LAMC2Q13753 1193 aa24.49■■□□□ 1.51
CLPTM1-201ENST00000337392 GLRA4Q5JXX5 417 aa24.49■■□□□ 1.51
CLPTM1-201ENST00000337392 DNAJC24Q6P3W2 148 aa24.49■■□□□ 1.51
CLPTM1-201ENST00000337392 MTHFD1LQ6UB35 978 aa24.49■■□□□ 1.51
CLPTM1-201ENST00000337392 MFSD7Q6UXD7 560 aa24.49■■□□□ 1.51
CLPTM1-201ENST00000337392 EPS8L3Q8TE67 593 aaKnown RBP24.49■■□□□ 1.51
CLPTM1-201ENST00000337392 RAPGEF5Q92565 580 aa24.49■■□□□ 1.51
CLPTM1-201ENST00000337392 FAM81BQ96LP2 452 aa24.49■■□□□ 1.51
CLPTM1-201ENST00000337392 LPIN3Q9BQK8 851 aa24.49■■□□□ 1.51
CLPTM1-201ENST00000337392 PARVAQ9NVD7 372 aa24.49■■□□□ 1.51
CLPTM1-201ENST00000337392 PNMA3Q9UL41 463 aa24.49■■□□□ 1.51
CLPTM1-201ENST00000337392 PPEF2O14830 753 aa24.48■■□□□ 1.51
CLPTM1-201ENST00000337392 B4GALNT4Q76KP1 1039 aa24.48■■□□□ 1.51
CLPTM1-201ENST00000337392 TAB3Q8N5C8 712 aaPredicted RBP24.48■■□□□ 1.51
CLPTM1-201ENST00000337392 EIF1ADQ8N9N8 165 aaKnown RBP24.48■■□□□ 1.51
CLPTM1-201ENST00000337392 UBA3Q8TBC4 463 aa24.48■■□□□ 1.51
CLPTM1-201ENST00000337392 CPXM1Q96SM3 734 aa24.48■■□□□ 1.51
CLPTM1-201ENST00000337392 OSBPL8Q9BZF1 889 aa24.48■■□□□ 1.51
CLPTM1-201ENST00000337392 DCLK3Q9C098 648 aa24.48■■□□□ 1.51
CLPTM1-201ENST00000337392 LRRC19Q9H756 370 aa24.48■■□□□ 1.51
CLPTM1-201ENST00000337392 TMEM191CA6NGB0 347 aa24.48■■□□□ 1.51
CLPTM1-201ENST00000337392 EIF3HO15372 352 aaKnown RBP eCLIP24.48■■□□□ 1.51
CLPTM1-201ENST00000337392 GAS2O43903 313 aaKnown RBP24.48■■□□□ 1.51
CLPTM1-201ENST00000337392 B4GALT4O60513 344 aa24.48■■□□□ 1.51
CLPTM1-201ENST00000337392 ACSL3O95573 720 aa24.48■■□□□ 1.51
CLPTM1-201ENST00000337392 ILDR2Q71H61 639 aa24.48■■□□□ 1.51
CLPTM1-201ENST00000337392 PPTC7Q8NI37 304 aa24.48■■□□□ 1.51
CLPTM1-201ENST00000337392 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.48■■□□□ 1.51
CLPTM1-201ENST00000337392 ELOVL4Q9GZR5 314 aa24.48■■□□□ 1.51
CLPTM1-201ENST00000337392 AAASQ9NRG9 546 aa24.48■■□□□ 1.51
CLPTM1-201ENST00000337392 FEZ2Q9UHY8 353 aaPredicted RBP24.48■■□□□ 1.51
CLPTM1-201ENST00000337392 HCRTO43612 131 aa24.48■■□□□ 1.51
CLPTM1-201ENST00000337392 PHKA2P46019 1235 aa24.48■■□□□ 1.51
CLPTM1-201ENST00000337392 DYNLT1P63172 113 aa24.48■■□□□ 1.51
CLPTM1-201ENST00000337392 C1QBPQ07021 282 aaKnown RBP24.48■■□□□ 1.51
CLPTM1-201ENST00000337392 KLF1Q13351 362 aaPredicted RBP24.48■■□□□ 1.51
CLPTM1-201ENST00000337392 ERICH1Q86X53 443 aa24.48■■□□□ 1.51
CLPTM1-201ENST00000337392 RHOT1Q8IXI2 618 aa24.48■■□□□ 1.51
CLPTM1-201ENST00000337392 C12orf29Q8N999 325 aa24.48■■□□□ 1.51
CLPTM1-201ENST00000337392 TRIM11Q96F44 468 aa24.48■■□□□ 1.51
CLPTM1-201ENST00000337392 MAML3Q96JK9 1138 aa24.48■■□□□ 1.51
CLPTM1-201ENST00000337392 MRPL47Q9HD33 250 aaKnown RBP24.48■■□□□ 1.51
CLPTM1-201ENST00000337392 SLC26A2P50443 739 aa24.47■■□□□ 1.51
CLPTM1-201ENST00000337392 RAD23BP54727 409 aa24.47■■□□□ 1.51
CLPTM1-201ENST00000337392 CCDC38Q502W7 563 aa24.47■■□□□ 1.51
CLPTM1-201ENST00000337392 ZNF667Q5HYK9 610 aa24.47■■□□□ 1.51
CLPTM1-201ENST00000337392 HP1BP3Q5SSJ5 553 aaPredicted RBP24.47■■□□□ 1.51
CLPTM1-201ENST00000337392 CXorf38Q8TB03 319 aa24.47■■□□□ 1.51
CLPTM1-201ENST00000337392 PIWIL1Q96J94 861 aaKnown RBP24.47■■□□□ 1.51
CLPTM1-201ENST00000337392 ZWILCHQ9H900 591 aa24.47■■□□□ 1.51
CLPTM1-201ENST00000337392 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.47■■□□□ 1.51
CLPTM1-201ENST00000337392 AGAP1Q9UPQ3 857 aa24.47■■□□□ 1.51
CLPTM1-201ENST00000337392 HSPA6P17066 643 aa24.47■■□□□ 1.51
CLPTM1-201ENST00000337392 IFI35P80217 286 aaPredicted RBP24.47■■□□□ 1.51
CLPTM1-201ENST00000337392 MTM1Q13496 603 aa24.47■■□□□ 1.51
CLPTM1-201ENST00000337392 HIC1Q14526 733 aa24.47■■□□□ 1.51
CLPTM1-201ENST00000337392 TAF5Q15542 800 aa24.47■■□□□ 1.51
CLPTM1-201ENST00000337392 GRIK4Q16099 956 aa24.47■■□□□ 1.51
CLPTM1-201ENST00000337392 TRIM72Q6ZMU5 477 aa24.47■■□□□ 1.51
CLPTM1-201ENST00000337392 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms