RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 C18orf8Q96DM3 657 aa7.71□□□□□ -1.17
EPHA3-201ENST00000336596 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.71□□□□□ -1.17
EPHA3-201ENST00000336596 ASCC2Q9H1I8 757 aaPredicted RBP7.71□□□□□ -1.17
EPHA3-201ENST00000336596 KLHL11Q9NVR0 708 aa7.71□□□□□ -1.17
EPHA3-201ENST00000336596 VPS51Q9UID3 782 aa7.71□□□□□ -1.17
EPHA3-201ENST00000336596 TRAV19A0A0A6YYK7 116 aa7.71□□□□□ -1.18
EPHA3-201ENST00000336596 FRMD3A2A2Y4 597 aa7.71□□□□□ -1.18
EPHA3-201ENST00000336596 MOXD2PA6NHM9 499 aa7.71□□□□□ -1.18
EPHA3-201ENST00000336596 ANXA9O76027 345 aa7.71□□□□□ -1.18
EPHA3-201ENST00000336596 FGBP02675 491 aa7.71□□□□□ -1.18
EPHA3-201ENST00000336596 CKMP06732 381 aa7.71□□□□□ -1.18
EPHA3-201ENST00000336596 GRK4P32298 578 aa7.71□□□□□ -1.18
EPHA3-201ENST00000336596 PTK6Q13882 451 aa7.71□□□□□ -1.18
EPHA3-201ENST00000336596 VGLL4Q14135 290 aa7.71□□□□□ -1.18
EPHA3-201ENST00000336596 FSCBQ5H9T9 825 aa7.71□□□□□ -1.18
EPHA3-201ENST00000336596 RCOR2Q8IZ40 523 aa7.71□□□□□ -1.18
EPHA3-201ENST00000336596 TFB1MQ8WVM0 346 aaKnown RBP7.71□□□□□ -1.18
EPHA3-201ENST00000336596 PXMP2Q9NR77 195 aa7.71□□□□□ -1.18
EPHA3-201ENST00000336596 HSPBP1Q9NZL4 362 aa7.71□□□□□ -1.18
EPHA3-201ENST00000336596 SLC45A1Q9Y2W3 748 aa7.71□□□□□ -1.18
EPHA3-201ENST00000336596 NRCAMQ92823 1304 aa7.71□□□□□ -1.18
EPHA3-201ENST00000336596 HNRNPCL2B2RXH8 293 aa7.71□□□□□ -1.18
EPHA3-201ENST00000336596 TLL1O43897 1013 aa7.71□□□□□ -1.18
EPHA3-201ENST00000336596 HNRNPCL1O60812 293 aaKnown RBP7.71□□□□□ -1.18
EPHA3-201ENST00000336596 ZRANB2O95218 330 aaKnown RBP eCLIP7.71□□□□□ -1.18
EPHA3-201ENST00000336596 ANP32DO95626 131 aa7.71□□□□□ -1.18
EPHA3-201ENST00000336596 HDAC4P56524 1084 aa7.71□□□□□ -1.18
EPHA3-201ENST00000336596 LRRC43Q8N309 656 aa7.71□□□□□ -1.18
EPHA3-201ENST00000336596 AHCYL2Q96HN2 611 aaKnown RBP7.71□□□□□ -1.18
EPHA3-201ENST00000336596 GOLPH3LQ9H4A5 285 aa7.71□□□□□ -1.18
EPHA3-201ENST00000336596 FANCEQ9HB96 536 aa7.71□□□□□ -1.18
EPHA3-201ENST00000336596 FBXO2Q9UK22 296 aaPredicted RBP7.71□□□□□ -1.18
EPHA3-201ENST00000336596 NAGPAQ9UK23 515 aa7.71□□□□□ -1.18
EPHA3-201ENST00000336596 TRPM3Q9HCF6 1732 aaPredicted RBP7.71□□□□□ -1.18
EPHA3-201ENST00000336596 SHC4Q6S5L8 630 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 FMR1NBQ8N0W7 255 aaPredicted RBP7.7□□□□□ -1.18
EPHA3-201ENST00000336596 FAM133AQ8N9E0 248 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 HPS3Q969F9 1004 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 ZNF668Q96K58 619 aaPredicted RBP7.7□□□□□ -1.18
EPHA3-201ENST00000336596 CCSER1Q9C0I3 900 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 TMEM8AQ9HCN3 771 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 ZCCHC17Q9NP64 241 aaKnown RBP7.7□□□□□ -1.18
EPHA3-201ENST00000336596 A0A088AWK7 358 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 OGTO15294 1046 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 MYL4P12829 197 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 ZNF10P21506 573 aaPredicted RBP7.7□□□□□ -1.18
EPHA3-201ENST00000336596 ABCE1P61221 599 aaKnown RBP7.7□□□□□ -1.18
EPHA3-201ENST00000336596 PTPN11Q06124 597 aaPredicted RBP7.7□□□□□ -1.18
EPHA3-201ENST00000336596 NCOA4Q13772 614 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 RETSATQ6NUM9 610 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 AMIGO3Q86WK7 504 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 TNS4Q8IZW8 715 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 RNF10Q8N5U6 811 aaKnown RBP7.7□□□□□ -1.18
EPHA3-201ENST00000336596 ARMC2Q8NEN0 867 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 PYROXD1Q8WU10 500 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 CNOT10Q9H9A5 744 aaKnown RBP7.7□□□□□ -1.18
EPHA3-201ENST00000336596 FGFR1OP2Q9NVK5 253 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 SAE1Q9UBE0 346 aaPredicted RBP7.7□□□□□ -1.18
EPHA3-201ENST00000336596 ZDHHC9Q9Y397 364 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 FAM170AA1A519 330 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 CCDC160A6NGH7 325 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 NCK2O43639 380 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 OCM2P0CE71 109 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 OCMP0CE72 109 aaPredicted RBP7.7□□□□□ -1.18
EPHA3-201ENST00000336596 PTPRAP18433 802 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 MAPK8P45983 427 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 GEMP55040 296 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 Q4G0T1 1027 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 GLE1Q53GS7 698 aaKnown RBP7.7□□□□□ -1.18
EPHA3-201ENST00000336596 FAM46CQ5VWP2 391 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 PKN3Q6P5Z2 889 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 ACAD11Q709F0 780 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 SPIRE2Q8WWL2 714 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 WDR18Q9BV38 432 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 DHX35Q9H5Z1 703 aaKnown RBP7.7□□□□□ -1.18
EPHA3-201ENST00000336596 RIOX1Q9H6W3 641 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 YY1AP1Q9H869 796 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 KCNH7Q9NS40 1196 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 NR2E1Q9Y466 385 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 ZNF541Q9H0D2 1346 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 YDJCA8MPS7 323 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 C1QTNF3-AMACRE9PGA6 284 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 CASP2P42575 452 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 INPP1P49441 399 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 PSEN1P49768 467 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 DYNLT1P63172 113 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 HPCAP84074 193 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 RBM10P98175 930 aaKnown RBP7.7□□□□□ -1.18
EPHA3-201ENST00000336596 TCP11X2Q5H9J9 407 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 ZDHHC17Q8IUH5 632 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 SUGP1Q8IWZ8 645 aaKnown RBP7.7□□□□□ -1.18
EPHA3-201ENST00000336596 RNF217Q8TC41 542 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 FGD4Q96M96 766 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 UBE2OQ9C0C9 1292 aaKnown RBP7.7□□□□□ -1.18
EPHA3-201ENST00000336596 UVRAGQ9P2Y5 699 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 TPX2Q9ULW0 747 aaKnown RBP7.7□□□□□ -1.18
EPHA3-201ENST00000336596 DNAJC8O75937 253 aaPredicted RBP7.7□□□□□ -1.18
EPHA3-201ENST00000336596 ASS1P00966 412 aaKnown RBP7.7□□□□□ -1.18
EPHA3-201ENST00000336596 JAK1P23458 1154 aa7.7□□□□□ -1.18
EPHA3-201ENST00000336596 CCT5P48643 541 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms