RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 GRM1Q13255 1194 aa18.74■□□□□ 0.59
LRCH3-201ENST00000334859 SGSM1Q2NKQ1 1148 aa18.74■□□□□ 0.59
LRCH3-201ENST00000334859 CDCA2Q69YH5 1023 aaPredicted RBP18.74■□□□□ 0.59
LRCH3-201ENST00000334859 RHPN2Q8IUC4 686 aa18.74■□□□□ 0.59
LRCH3-201ENST00000334859 THNSL1Q8IYQ7 743 aa18.74■□□□□ 0.59
LRCH3-201ENST00000334859 TCP11Q8WWU5 503 aa18.74■□□□□ 0.59
LRCH3-201ENST00000334859 KCNK9Q9NPC2 374 aa18.74■□□□□ 0.59
LRCH3-201ENST00000334859 TBK1Q9UHD2 729 aa18.74■□□□□ 0.59
LRCH3-201ENST00000334859 DNPEPQ9ULA0 475 aa18.74■□□□□ 0.59
LRCH3-201ENST00000334859 ZNF148Q9UQR1 794 aa18.74■□□□□ 0.59
LRCH3-201ENST00000334859 LIASO43766 372 aa18.73■□□□□ 0.59
LRCH3-201ENST00000334859 TJP3O95049 919 aa18.73■□□□□ 0.59
LRCH3-201ENST00000334859 ARIH2O95376 493 aa18.73■□□□□ 0.59
LRCH3-201ENST00000334859 PGK2P07205 417 aa18.73■□□□□ 0.59
LRCH3-201ENST00000334859 CREB1P16220 341 aa18.73■□□□□ 0.59
LRCH3-201ENST00000334859 MXD4Q14582 209 aaPredicted RBP18.73■□□□□ 0.59
LRCH3-201ENST00000334859 PLCB4Q15147 1175 aa18.73■□□□□ 0.59
LRCH3-201ENST00000334859 HSDL1Q3SXM5 330 aa18.73■□□□□ 0.59
LRCH3-201ENST00000334859 CYP4F22Q6NT55 531 aa18.73■□□□□ 0.59
LRCH3-201ENST00000334859 HAUS1Q96CS2 278 aa18.73■□□□□ 0.59
LRCH3-201ENST00000334859 NLRP4Q96MN2 994 aa18.73■□□□□ 0.59
LRCH3-201ENST00000334859 NSRP1Q9H0G5 558 aaKnown RBP18.73■□□□□ 0.59
LRCH3-201ENST00000334859 CCDC134Q9H6E4 229 aa18.73■□□□□ 0.59
LRCH3-201ENST00000334859 CEP83Q9Y592 693 aa18.73■□□□□ 0.59
LRCH3-201ENST00000334859 CD2APQ9Y5K6 639 aa18.73■□□□□ 0.59
LRCH3-201ENST00000334859 ASAP2O43150 1006 aa18.72■□□□□ 0.59
LRCH3-201ENST00000334859 KLRC2P26717 231 aa18.72■□□□□ 0.59
LRCH3-201ENST00000334859 HNRNPH1P31943 449 aaKnown RBP18.72■□□□□ 0.59
LRCH3-201ENST00000334859 OGDHQ02218 1023 aa18.72■□□□□ 0.59
LRCH3-201ENST00000334859 LMNB2Q03252 620 aa18.72■□□□□ 0.59
LRCH3-201ENST00000334859 MCL1Q07820 350 aa18.72■□□□□ 0.59
LRCH3-201ENST00000334859 CDR2LQ86X02 465 aaPredicted RBP18.72■□□□□ 0.59
LRCH3-201ENST00000334859 ERICH1Q86X53 443 aa18.72■□□□□ 0.59
LRCH3-201ENST00000334859 ANKRD42Q8N9B4 389 aa18.72■□□□□ 0.59
LRCH3-201ENST00000334859 RBM15Q96T37 977 aaKnown RBP eCLIP18.72■□□□□ 0.59
LRCH3-201ENST00000334859 ELAC2Q9BQ52 826 aaKnown RBP18.72■□□□□ 0.59
LRCH3-201ENST00000334859 FHDC1Q9C0D6 1143 aaPredicted RBP18.72■□□□□ 0.59
LRCH3-201ENST00000334859 MLXIPLQ9NP71 852 aa18.72■□□□□ 0.59
LRCH3-201ENST00000334859 NXF1Q9UBU9 619 aaKnown RBP18.72■□□□□ 0.59
LRCH3-201ENST00000334859 CPSF3Q9UKF6 684 aaKnown RBP18.72■□□□□ 0.59
LRCH3-201ENST00000334859 LRRD1A4D1F6 860 aa18.72■□□□□ 0.59
LRCH3-201ENST00000334859 DNM1LO00429 736 aa18.72■□□□□ 0.59
LRCH3-201ENST00000334859 KCNV1Q6PIU1 500 aa18.72■□□□□ 0.59
LRCH3-201ENST00000334859 SPOCD1Q6ZMY3 1216 aa18.72■□□□□ 0.59
LRCH3-201ENST00000334859 TRAPPC12Q8WVT3 735 aa18.72■□□□□ 0.59
LRCH3-201ENST00000334859 TFAP2BQ92481 460 aa18.72■□□□□ 0.59
LRCH3-201ENST00000334859 R3HDMLQ9H3Y0 253 aa18.72■□□□□ 0.59
LRCH3-201ENST00000334859 EFCC1Q9HA90 598 aa18.72■□□□□ 0.59
LRCH3-201ENST00000334859 INO80B-WBP1J3KQ70 363 aa18.71■□□□□ 0.59
LRCH3-201ENST00000334859 TNNC2P02585 160 aa18.71■□□□□ 0.59
LRCH3-201ENST00000334859 GJB1P08034 283 aa18.71■□□□□ 0.59
LRCH3-201ENST00000334859 HOXC6P09630 235 aa18.71■□□□□ 0.59
LRCH3-201ENST00000334859 CD19P15391 556 aa18.71■□□□□ 0.59
LRCH3-201ENST00000334859 SURF1Q15526 300 aa18.71■□□□□ 0.59
LRCH3-201ENST00000334859 TXNRD3NBQ6F5E7 133 aa18.71■□□□□ 0.59
LRCH3-201ENST00000334859 HIBCHQ6NVY1 386 aaPredicted RBP18.71■□□□□ 0.59
LRCH3-201ENST00000334859 GLIS1Q8NBF1 620 aa18.71■□□□□ 0.59
LRCH3-201ENST00000334859 OTUD5Q96G74 571 aa18.71■□□□□ 0.59
LRCH3-201ENST00000334859 GPR20Q99678 358 aa18.71■□□□□ 0.59
LRCH3-201ENST00000334859 INO80BQ9C086 356 aaPredicted RBP18.71■□□□□ 0.59
LRCH3-201ENST00000334859 C2orf40Q9H1Z8 148 aa18.71■□□□□ 0.59
LRCH3-201ENST00000334859 LRRC37A2A6NM11 1700 aa18.71■□□□□ 0.59
LRCH3-201ENST00000334859 ZBTB42B2RXF5 422 aa18.71■□□□□ 0.59
LRCH3-201ENST00000334859 GOLGA8SH3BPF8 625 aa18.71■□□□□ 0.59
LRCH3-201ENST00000334859 KRT19P08727 400 aa18.71■□□□□ 0.59
LRCH3-201ENST00000334859 ZSCAN5DPP0CG00 497 aa18.71■□□□□ 0.59
LRCH3-201ENST00000334859 BRAFP15056 766 aa18.71■□□□□ 0.59
LRCH3-201ENST00000334859 ASPAP45381 313 aa18.71■□□□□ 0.59
LRCH3-201ENST00000334859 ARSEP51690 589 aa18.71■□□□□ 0.59
LRCH3-201ENST00000334859 LACTBP83111 547 aaPredicted RBP18.71■□□□□ 0.59
LRCH3-201ENST00000334859 EAPPQ56P03 285 aaPredicted RBP18.71■□□□□ 0.59
LRCH3-201ENST00000334859 MPZL3Q6UWV2 235 aa18.71■□□□□ 0.59
LRCH3-201ENST00000334859 VSTM1Q6UX27 236 aa18.71■□□□□ 0.59
LRCH3-201ENST00000334859 GPC2Q8N158 579 aa18.71■□□□□ 0.59
LRCH3-201ENST00000334859 ZCCHC9Q8N567 271 aaKnown RBP18.71■□□□□ 0.59
LRCH3-201ENST00000334859 P3H4Q92791 437 aa18.71■□□□□ 0.59
LRCH3-201ENST00000334859 ZNF518BQ9C0D4 1074 aa18.71■□□□□ 0.59
LRCH3-201ENST00000334859 ABLIM1O14639 778 aa18.7■□□□□ 0.58
LRCH3-201ENST00000334859 B4GALT5O43286 388 aa18.7■□□□□ 0.58
LRCH3-201ENST00000334859 GAS2O43903 313 aaKnown RBP18.7■□□□□ 0.58
LRCH3-201ENST00000334859 CDH16O75309 829 aa18.7■□□□□ 0.58
LRCH3-201ENST00000334859 SCTRP47872 440 aa18.7■□□□□ 0.58
LRCH3-201ENST00000334859 PIGHQ14442 188 aaPredicted RBP18.7■□□□□ 0.58
LRCH3-201ENST00000334859 ATF7IP2Q5U623 682 aa18.7■□□□□ 0.58
LRCH3-201ENST00000334859 LRRC38Q5VT99 294 aa18.7■□□□□ 0.58
LRCH3-201ENST00000334859 PIGWQ7Z7B1 504 aa18.7■□□□□ 0.58
LRCH3-201ENST00000334859 CEP120Q8N960 986 aa18.7■□□□□ 0.58
LRCH3-201ENST00000334859 CCHCR1Q8TD31 782 aa18.7■□□□□ 0.58
LRCH3-201ENST00000334859 CCT6BQ92526 530 aa18.7■□□□□ 0.58
LRCH3-201ENST00000334859 ANKRD36BP1Q96IX9 119 aa18.7■□□□□ 0.58
LRCH3-201ENST00000334859 MPHOSPH6Q99547 160 aaKnown RBP18.7■□□□□ 0.58
LRCH3-201ENST00000334859 CCDC77Q9BR77 488 aa18.7■□□□□ 0.58
LRCH3-201ENST00000334859 POLIQ9UNA4 740 aa18.7■□□□□ 0.58
LRCH3-201ENST00000334859 PPME1Q9Y570 386 aa18.7■□□□□ 0.58
LRCH3-201ENST00000334859 TCRBV5S1A1TA0A578 114 aa18.7■□□□□ 0.58
LRCH3-201ENST00000334859 VGLL3A8MV65 326 aa18.7■□□□□ 0.58
LRCH3-201ENST00000334859 CETPP11597 493 aa18.7■□□□□ 0.58
LRCH3-201ENST00000334859 ETS1P14921 441 aa18.7■□□□□ 0.58
LRCH3-201ENST00000334859 MAGEA4P43358 317 aa18.7■□□□□ 0.58
LRCH3-201ENST00000334859 RAP1GAPP47736 663 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms