RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 SLFN12LQ6IEE8 588 aa10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 MZT2BQ6NZ67 158 aa10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 P3H2Q8IVL5 708 aa10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 TAGLN3Q9UI15 199 aa10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 SCAF8Q9UPN6 1271 aaKnown RBP10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 KIAA0586Q9BVV6 1533 aa10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 CALB1P05937 261 aa10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 EIF2S3P41091 472 aaKnown RBP10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 SCARA5Q6ZMJ2 495 aa10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 C18orf25Q96B23 403 aaPredicted RBP10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 HES6Q96HZ4 224 aa10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 CLIC2O15247 247 aa10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 ZNF862O60290 1169 aa10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 FEN1P39748 380 aaKnown RBP10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 DCAF4L1Q3SXM0 396 aa10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 PRMT9Q6P2P2 845 aa10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 TRIM54Q9BYV2 358 aa10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 A0A1W2PRG6 482 aa10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 APOL1O14791 398 aa10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 AKR1D1P51857 326 aa10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 DNAJC3Q13217 504 aa10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 C1DQ13901 141 aaKnown RBP10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 FAM43BQ6ZT52 329 aaPredicted RBP10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 NET1Q7Z628 596 aaPredicted RBP10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 PPM1NQ8N819 430 aa10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 ACAD9Q9H845 621 aa10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 UBOX5O94941 541 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 PIK3R1P27986 724 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 GPS1Q13098 491 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 NR1I3Q14994 352 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 TRIM72Q6ZMU5 477 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 TOR1AIP2Q8NFQ8 470 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 FAM45AQ8TCE6 357 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 SYN2Q92777 582 aaPredicted RBP10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 WHRNQ9P202 907 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 PALD1Q9ULE6 856 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 TELO2Q9Y4R8 837 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 SPATA31E1Q6ZUB1 1445 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 USP19O94966 1318 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 TRIM43BA6NCK2 446 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 ADCY6O43306 1168 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 NCKAP1LP55160 1127 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 CSNK2BP67870 215 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 HPS3Q969F9 1004 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 FRMD6Q96NE9 622 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 PCIF1Q9H4Z3 704 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 TMEM165Q9HC07 324 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 POLG2Q9UHN1 485 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 ZNF180Q9UJW8 692 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 CES2O00748 559 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 NOS1APO75052 506 aaPredicted RBP10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 PHKA1P46020 1223 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 TTC39BQ5VTQ0 682 aaPredicted RBP10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 FAM160B1Q5W0V3 765 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 OR6B2Q6IFH4 312 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 MTHFD1LQ6UB35 978 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 C1orf131Q8NDD1 294 aaKnown RBP10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 TMEM206Q9H813 350 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 ALG13Q9NP73 1137 aaKnown RBP10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 TBCCD1Q9NVR7 557 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 ESYT3A0FGR9 886 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 ZC2HC1CQ53FD0 456 aaPredicted RBP10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 LRRC8DQ7L1W4 858 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 PAGE5Q96GU1 130 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 ERP44Q9BS26 406 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 BDH2Q9BUT1 245 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 SERHL2Q9H4I8 314 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 SERHLQ9NQF3 203 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 AFDNP55196 1824 aaKnown RBP10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 BLMHQ13867 455 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 TFDP1Q14186 410 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 RABL6Q3YEC7 729 aaPredicted RBP10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 COBLL1Q53SF7 1204 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 KRT26Q7Z3Y9 468 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 ERAP1Q9NZ08 941 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 TRPC5OSA6NMA1 111 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 SYNCRIPO60506 623 aaKnown RBP10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 POLR2MP0CAP2 368 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 HSMCR30P0CW71 290 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 C6orf10Q5SRN2 563 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 LRRC6Q86X45 466 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 ATP8A2Q9NTI2 1148 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 MAPRE3Q9UPY8 281 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 BAIAP2Q9UQB8 552 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 RPAP1Q9BWH6 1393 aaPredicted RBP10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 MAP2K7O14733 419 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 FGFR4P22455 802 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 PARP10Q53GL7 1025 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 PLEKHA5Q9HAU0 1116 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 ABCA8O94911 1581 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 RCAN1P53805 252 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 POLA2Q14181 598 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 MIS18BP1Q6P0N0 1132 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 PNKPQ96T60 521 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 IL1RL2Q9HB29 575 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 ANAPC7Q9UJX3 599 aa10.76□□□□□ -0.69
SPTBN1-201ENST00000333896 MAP3K19Q56UN5 1328 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 PER1O15534 1290 aaPredicted RBP10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 TIMM10P62072 90 aa10.75□□□□□ -0.69
SPTBN1-201ENST00000333896 OTUD4Q01804 1114 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms