RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 NME7Q9Y5B8 376 aa12.89□□□□□ -0.35
TRIM49B-201ENST00000332682 A0A0U1RQJ8 604 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 TBKBP1A7MCY6 615 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 F8W810 466 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 TMEM189-UBE2V1I3L0A0 370 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 ZSCAN12O43309 604 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 HUS1O60921 280 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 DGKIO75912 1065 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 UPP2O95045 317 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 AMHP03971 560 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 ITGB1P05556 798 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 PAEPP09466 180 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 TNFAIP3P21580 790 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 KRT83P78385 493 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 ORC1Q13415 861 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 PAN2Q504Q3 1202 aaKnown RBP12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 TIGD5Q53EQ6 642 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 DPH6Q7L8W6 267 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 ZNF677Q86XU0 584 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 REXO1L1PQ8IX06 675 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 ADGRF2Q8IZF7 708 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 LRRC43Q8N309 656 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 PDCL2Q8N4E4 241 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 SLC4A11Q8NBS3 891 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 HASPINQ8TF76 798 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 ATRIPQ8WXE1 791 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 TOP1MTQ969P6 601 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 SENP8Q96LD8 212 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 FAM193BQ96PV7 902 aaPredicted RBP12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 PCDHB18PQ96TA0 734 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 ZSWIM1Q9BR11 485 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 NRDE2Q9H7Z3 1164 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 HCSTQ9UBK5 93 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 CYB561D2O14569 222 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 CCP110O43303 1012 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 THAP12O43422 761 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 ZNF500O60304 480 aaPredicted RBP12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 PAX3P23760 479 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 BRD2P25440 801 aaKnown RBP12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 EPHB4P54760 987 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 WSCD1Q658N2 575 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 ALKBH5Q6P6C2 394 aaKnown RBP12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 DCLRE1AQ6PJP8 1040 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 OTOP2Q7RTS6 562 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 UNC93AQ86WB7 457 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 ZNF606Q8WXB4 792 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 TFAP2BQ92481 460 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 TMEM176AQ96HP8 235 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 NT5C1AQ9BXI3 368 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 RC3H2Q9HBD1 1191 aaKnown RBP12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 SEPT11Q9NVA2 429 aaKnown RBP12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 PUF60Q9UHX1 559 aaKnown RBP12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 TFR2Q9UP52 801 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 PCDHA13Q9Y5I0 950 aa12.88□□□□□ -0.35
TRIM49B-201ENST00000332682 RCCD1A6NED2 376 aa12.87□□□□□ -0.35
TRIM49B-201ENST00000332682 I3L4J1 428 aa12.87□□□□□ -0.35
TRIM49B-201ENST00000332682 M0QZQ0 153 aa12.87□□□□□ -0.35
TRIM49B-201ENST00000332682 HCRTO43612 131 aa12.87□□□□□ -0.35
TRIM49B-201ENST00000332682 CFHP08603 1231 aa12.87□□□□□ -0.35
TRIM49B-201ENST00000332682 FAM163BP0C2L3 166 aa12.87□□□□□ -0.35
TRIM49B-201ENST00000332682 CD19P15391 556 aa12.87□□□□□ -0.35
TRIM49B-201ENST00000332682 SYN1P17600 705 aa12.87□□□□□ -0.35
TRIM49B-201ENST00000332682 WARSP23381 471 aaKnown RBP12.87□□□□□ -0.35
TRIM49B-201ENST00000332682 ARHGAP25P42331 645 aa12.87□□□□□ -0.35
TRIM49B-201ENST00000332682 MAGEA1P43355 309 aa12.87□□□□□ -0.35
TRIM49B-201ENST00000332682 BRCC3P46736 316 aa12.87□□□□□ -0.35
TRIM49B-201ENST00000332682 OR1G1P47890 313 aa12.87□□□□□ -0.35
TRIM49B-201ENST00000332682 VAV2P52735 878 aa12.87□□□□□ -0.35
TRIM49B-201ENST00000332682 CCDC122Q5T0U0 273 aa12.87□□□□□ -0.35
TRIM49B-201ENST00000332682 DSTYKQ6XUX3 929 aa12.87□□□□□ -0.35
TRIM49B-201ENST00000332682 ZNF365Q70YC5 407 aa12.87□□□□□ -0.35
TRIM49B-201ENST00000332682 TMCO2Q7Z6W1 182 aaPredicted RBP12.87□□□□□ -0.35
TRIM49B-201ENST00000332682 OSTM1Q86WC4 334 aa12.87□□□□□ -0.35
TRIM49B-201ENST00000332682 OR6B3Q8NGW1 331 aa12.87□□□□□ -0.35
TRIM49B-201ENST00000332682 LACRTQ9GZZ8 138 aa12.87□□□□□ -0.35
TRIM49B-201ENST00000332682 TAS2R14Q9NYV8 317 aa12.87□□□□□ -0.35
TRIM49B-201ENST00000332682 STXBP5LQ9Y2K9 1186 aa12.87□□□□□ -0.35
TRIM49B-201ENST00000332682 PRG3Q9Y2Y8 225 aaPredicted RBP12.87□□□□□ -0.35
TRIM49B-201ENST00000332682 ATP8B3O60423 1300 aa12.86□□□□□ -0.35
TRIM49B-201ENST00000332682 A8MXQ7 604 aa12.86□□□□□ -0.35
TRIM49B-201ENST00000332682 GABRDO14764 452 aa12.86□□□□□ -0.35
TRIM49B-201ENST00000332682 FGBP02675 491 aa12.86□□□□□ -0.35
TRIM49B-201ENST00000332682 CYP1A1P04798 512 aaPredicted RBP12.86□□□□□ -0.35
TRIM49B-201ENST00000332682 ODC1P11926 461 aa12.86□□□□□ -0.35
TRIM49B-201ENST00000332682 LMO2P25791 158 aa12.86□□□□□ -0.35
TRIM49B-201ENST00000332682 GNL1P36915 607 aaPredicted RBP12.86□□□□□ -0.35
TRIM49B-201ENST00000332682 SLC11A1P49279 550 aa12.86□□□□□ -0.35
TRIM49B-201ENST00000332682 C10orf76Q5T2E6 689 aa12.86□□□□□ -0.35
TRIM49B-201ENST00000332682 PSRC1Q6PGN9 363 aaPredicted RBP12.86□□□□□ -0.35
TRIM49B-201ENST00000332682 ZNF662Q6ZS27 426 aa12.86□□□□□ -0.35
TRIM49B-201ENST00000332682 KIAA1328Q86T90 577 aa12.86□□□□□ -0.35
TRIM49B-201ENST00000332682 DNAAF5Q86Y56 855 aa12.86□□□□□ -0.35
TRIM49B-201ENST00000332682 TMEM86AQ8N2M4 240 aa12.86□□□□□ -0.35
TRIM49B-201ENST00000332682 ZNF689Q96CS4 500 aaPredicted RBP12.86□□□□□ -0.35
TRIM49B-201ENST00000332682 SUSD3Q96L08 255 aa12.86□□□□□ -0.35
TRIM49B-201ENST00000332682 TMEM175Q9BSA9 504 aa12.86□□□□□ -0.35
TRIM49B-201ENST00000332682 PACSIN1Q9BY11 444 aa12.86□□□□□ -0.35
TRIM49B-201ENST00000332682 SNX25Q9H3E2 840 aa12.86□□□□□ -0.35
TRIM49B-201ENST00000332682 DPEP3Q9H4B8 488 aa12.86□□□□□ -0.35
TRIM49B-201ENST00000332682 LZTFL1Q9NQ48 299 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms