RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 PODXLO00592 558 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 SYN3O14994 580 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 ERLIN1O75477 346 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 KIF4AO95239 1232 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 CST3P01034 146 aaPredicted RBP10.14□□□□□ -0.79
C11orf54-201ENST00000331239 ALDH2P05091 517 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 CYP11A1P05108 521 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 PAEPP09466 180 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 LAG3P18627 525 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 OAS2P29728 719 aaKnown RBP10.14□□□□□ -0.79
C11orf54-201ENST00000331239 POLR2BP30876 1174 aaKnown RBP10.14□□□□□ -0.79
C11orf54-201ENST00000331239 SCNN1GP51170 649 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 LILRA4P59901 499 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 MYL6P60660 151 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 TNNC1P63316 161 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 SMC1AQ14683 1233 aaKnown RBP10.14□□□□□ -0.79
C11orf54-201ENST00000331239 TCTN1Q2MV58 587 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 PHLDB3Q6NSJ2 640 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 ZNF662Q6ZS27 426 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 ZNF365Q70YC5 407 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 KIAA1328Q86T90 577 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 FAM71AQ8IYT1 594 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 LPPQ93052 612 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 SAMD11Q96NU1 681 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 PNKPQ96T60 521 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 UBE2TQ9NPD8 197 aaPredicted RBP10.14□□□□□ -0.79
C11orf54-201ENST00000331239 KLK14Q9P0G3 267 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 SLC4A7Q9Y6M7 1214 aa10.14□□□□□ -0.79
C11orf54-201ENST00000331239 KPNA7A9QM74 516 aa10.13□□□□□ -0.79
C11orf54-201ENST00000331239 GJB5O95377 273 aa10.13□□□□□ -0.79
C11orf54-201ENST00000331239 C1RP00736 705 aa10.13□□□□□ -0.79
C11orf54-201ENST00000331239 WARSP23381 471 aaKnown RBP10.13□□□□□ -0.79
C11orf54-201ENST00000331239 SOX5P35711 763 aa10.13□□□□□ -0.79
C11orf54-201ENST00000331239 PPM1AP35813 382 aa10.13□□□□□ -0.79
C11orf54-201ENST00000331239 LHX1P48742 406 aa10.13□□□□□ -0.79
C11orf54-201ENST00000331239 POLR2FP61218 127 aaKnown RBP10.13□□□□□ -0.79
C11orf54-201ENST00000331239 STILQ15468 1287 aa10.13□□□□□ -0.79
C11orf54-201ENST00000331239 CCDC122Q5T0U0 273 aa10.13□□□□□ -0.79
C11orf54-201ENST00000331239 SFMBT2Q5VUG0 894 aa10.13□□□□□ -0.79
C11orf54-201ENST00000331239 IQCEQ6IPM2 695 aa10.13□□□□□ -0.79
C11orf54-201ENST00000331239 CCDC170Q8IYT3 715 aa10.13□□□□□ -0.79
C11orf54-201ENST00000331239 SUSD3Q96L08 255 aa10.13□□□□□ -0.79
C11orf54-201ENST00000331239 ZFP42Q96MM3 310 aa10.13□□□□□ -0.79
C11orf54-201ENST00000331239 SPAG5Q96R06 1193 aa10.13□□□□□ -0.79
C11orf54-201ENST00000331239 RAD9AQ99638 391 aa10.13□□□□□ -0.79
C11orf54-201ENST00000331239 CRACR2AQ9BSW2 395 aa10.13□□□□□ -0.79
C11orf54-201ENST00000331239 FAM207AQ9NSI2 230 aaPredicted RBP10.13□□□□□ -0.79
C11orf54-201ENST00000331239 MIOSQ9NXC5 875 aa10.13□□□□□ -0.79
C11orf54-201ENST00000331239 SSU72P8A0A1W2PR75 194 aa10.13□□□□□ -0.79
C11orf54-201ENST00000331239 POLR3GO15318 223 aaPredicted RBP10.13□□□□□ -0.79
C11orf54-201ENST00000331239 KRT86O43790 486 aa10.13□□□□□ -0.79
C11orf54-201ENST00000331239 TUBBP07437 444 aa10.13□□□□□ -0.79
C11orf54-201ENST00000331239 KLK7P49862 253 aa10.13□□□□□ -0.79
C11orf54-201ENST00000331239 RNASELQ05823 741 aaKnown RBP10.13□□□□□ -0.79
C11orf54-201ENST00000331239 APPL2Q8NEU8 664 aa10.13□□□□□ -0.79
C11orf54-201ENST00000331239 PLVAPQ9BX97 442 aa10.13□□□□□ -0.79
C11orf54-201ENST00000331239 TUBGCP4Q9UGJ1 667 aa10.13□□□□□ -0.79
C11orf54-201ENST00000331239 PCDHB8Q9UN66 801 aa10.13□□□□□ -0.79
C11orf54-201ENST00000331239 EIF3CLB5ME19 914 aaKnown RBP10.12□□□□□ -0.79
C11orf54-201ENST00000331239 F8VZ95 297 aa10.12□□□□□ -0.79
C11orf54-201ENST00000331239 HUS1O60921 280 aa10.12□□□□□ -0.79
C11orf54-201ENST00000331239 SERPING1P05155 500 aa10.12□□□□□ -0.79
C11orf54-201ENST00000331239 KRT19P08727 400 aa10.12□□□□□ -0.79
C11orf54-201ENST00000331239 ASPAP45381 313 aa10.12□□□□□ -0.79
C11orf54-201ENST00000331239 ZNF132P52740 706 aa10.12□□□□□ -0.79
C11orf54-201ENST00000331239 BEND6Q5SZJ8 279 aaPredicted RBP10.12□□□□□ -0.79
C11orf54-201ENST00000331239 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.12□□□□□ -0.79
C11orf54-201ENST00000331239 TXLNBQ8N3L3 684 aa10.12□□□□□ -0.79
C11orf54-201ENST00000331239 RNF169Q8NCN4 708 aa10.12□□□□□ -0.79
C11orf54-201ENST00000331239 C18orf25Q96B23 403 aaPredicted RBP10.12□□□□□ -0.79
C11orf54-201ENST00000331239 EIF3CQ99613 913 aaKnown RBP10.12□□□□□ -0.79
C11orf54-201ENST00000331239 MAFFQ9ULX9 164 aa10.12□□□□□ -0.79
C11orf54-201ENST00000331239 BARX2Q9UMQ3 279 aaPredicted RBP10.12□□□□□ -0.79
C11orf54-201ENST00000331239 SSX2IPQ9Y2D8 614 aa10.12□□□□□ -0.79
C11orf54-201ENST00000331239 NUB1Q9Y5A7 615 aa10.12□□□□□ -0.79
C11orf54-201ENST00000331239 CCDC66A2RUB6 948 aa10.12□□□□□ -0.79
C11orf54-201ENST00000331239 TBKBP1A7MCY6 615 aa10.12□□□□□ -0.79
C11orf54-201ENST00000331239 MAP2K7O14733 419 aa10.12□□□□□ -0.79
C11orf54-201ENST00000331239 EFEMP2O95967 443 aa10.12□□□□□ -0.79
C11orf54-201ENST00000331239 RHOXF2BP0C7M4 288 aa10.12□□□□□ -0.79
C11orf54-201ENST00000331239 ODC1P11926 461 aa10.12□□□□□ -0.79
C11orf54-201ENST00000331239 ACO1P21399 889 aaKnown RBP10.12□□□□□ -0.79
C11orf54-201ENST00000331239 SOX4Q06945 474 aaPredicted RBP10.12□□□□□ -0.79
C11orf54-201ENST00000331239 SMARCB1Q12824 385 aa10.12□□□□□ -0.79
C11orf54-201ENST00000331239 DRAP1Q14919 205 aaPredicted RBP10.12□□□□□ -0.79
C11orf54-201ENST00000331239 WDR72Q3MJ13 1102 aa10.12□□□□□ -0.79
C11orf54-201ENST00000331239 C10orf76Q5T2E6 689 aa10.12□□□□□ -0.79
C11orf54-201ENST00000331239 LMBRD2Q68DH5 695 aaPredicted RBP10.12□□□□□ -0.79
C11orf54-201ENST00000331239 VPS36Q86VN1 386 aa10.12□□□□□ -0.79
C11orf54-201ENST00000331239 PPM1KQ8N3J5 372 aa10.12□□□□□ -0.79
C11orf54-201ENST00000331239 NOA1Q8NC60 698 aaKnown RBP10.12□□□□□ -0.79
C11orf54-201ENST00000331239 CLP1Q92989 425 aaKnown RBP10.12□□□□□ -0.79
C11orf54-201ENST00000331239 RHOXF2Q9BQY4 288 aa10.12□□□□□ -0.79
C11orf54-201ENST00000331239 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.12□□□□□ -0.797e-6■■□□□ 11.5
C11orf54-201ENST00000331239 NRDE2Q9H7Z3 1164 aa10.12□□□□□ -0.79
C11orf54-201ENST00000331239 NHEJ1Q9H9Q4 299 aaPredicted RBP10.12□□□□□ -0.79
C11orf54-201ENST00000331239 APOBEC3GQ9HC16 384 aaKnown RBP10.12□□□□□ -0.79
C11orf54-201ENST00000331239 FAN1Q9Y2M0 1017 aa10.12□□□□□ -0.79
C11orf54-201ENST00000331239 PTPRSQ13332 1948 aa10.12□□□□□ -0.79
C11orf54-201ENST00000331239 SCN1AP35498 2009 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms