RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 PARVGQ9HBI0 331 aa21.66■■□□□ 1.06
CMTM4-201ENST00000330687 HEMK1Q9Y5R4 338 aaPredicted RBP21.66■■□□□ 1.06
CMTM4-201ENST00000330687 ACTL7BQ9Y614 415 aa21.66■■□□□ 1.06
CMTM4-201ENST00000330687 AK5Q9Y6K8 562 aa21.66■■□□□ 1.06
CMTM4-201ENST00000330687 PNMA6FA0A0J9YX94 578 aa21.66■■□□□ 1.06
CMTM4-201ENST00000330687 HNRNPCL1O60812 293 aaKnown RBP21.66■■□□□ 1.06
CMTM4-201ENST00000330687 ALCAMQ13740 583 aa21.66■■□□□ 1.06
CMTM4-201ENST00000330687 PDE1CQ14123 709 aaPredicted RBP21.66■■□□□ 1.06
CMTM4-201ENST00000330687 UBAP2LQ14157 1087 aaKnown RBP21.66■■□□□ 1.06
CMTM4-201ENST00000330687 RASA3Q14644 834 aa21.66■■□□□ 1.06
CMTM4-201ENST00000330687 SMAD1Q15797 465 aaKnown RBP21.66■■□□□ 1.06
CMTM4-201ENST00000330687 RHPN2Q8IUC4 686 aa21.66■■□□□ 1.06
CMTM4-201ENST00000330687 NEDD1Q8NHV4 660 aa21.66■■□□□ 1.06
CMTM4-201ENST00000330687 TLE6Q9H808 572 aa21.66■■□□□ 1.06
CMTM4-201ENST00000330687 DNPEPQ9ULA0 475 aa21.66■■□□□ 1.06
CMTM4-201ENST00000330687 MAGEB2O15479 319 aa21.65■■□□□ 1.06
CMTM4-201ENST00000330687 OATP04181 439 aa21.65■■□□□ 1.06
CMTM4-201ENST00000330687 RARBP10826 455 aa21.65■■□□□ 1.06
CMTM4-201ENST00000330687 RPS8P62241 208 aaKnown RBP21.65■■□□□ 1.06
CMTM4-201ENST00000330687 KIF22Q14807 665 aa21.65■■□□□ 1.06
CMTM4-201ENST00000330687 GDPD5Q8WTR4 605 aa21.65■■□□□ 1.06
CMTM4-201ENST00000330687 CNBD2Q96M20 576 aa21.65■■□□□ 1.06
CMTM4-201ENST00000330687 A0A0J9YVX5 310 aa21.65■■□□□ 1.06
CMTM4-201ENST00000330687 GTPBP10A4D1E9 387 aaKnown RBP21.65■■□□□ 1.06
CMTM4-201ENST00000330687 PDK3Q15120 406 aa21.65■■□□□ 1.06
CMTM4-201ENST00000330687 LRRC8BQ6P9F7 803 aa21.65■■□□□ 1.06
CMTM4-201ENST00000330687 FOXR2Q6PJQ5 311 aa21.65■■□□□ 1.06
CMTM4-201ENST00000330687 PPP1R14CQ8TAE6 165 aa21.65■■□□□ 1.06
CMTM4-201ENST00000330687 TUBB6Q9BUF5 446 aa21.65■■□□□ 1.06
CMTM4-201ENST00000330687 KCPQ6ZWJ8 1503 aa21.65■■□□□ 1.06
CMTM4-201ENST00000330687 ESYT2A0FGR8 921 aa21.65■■□□□ 1.06
CMTM4-201ENST00000330687 K7ENM7 598 aa21.65■■□□□ 1.06
CMTM4-201ENST00000330687 CLPTM1O96005 669 aa21.65■■□□□ 1.06
CMTM4-201ENST00000330687 SPATA31C1P0DKV0 1188 aa21.65■■□□□ 1.06
CMTM4-201ENST00000330687 AKR1B1P15121 316 aa21.65■■□□□ 1.06
CMTM4-201ENST00000330687 ARHGAP4P98171 946 aa21.65■■□□□ 1.06
CMTM4-201ENST00000330687 ORC2Q13416 577 aaPredicted RBP21.65■■□□□ 1.06
CMTM4-201ENST00000330687 PEX6Q13608 980 aa21.65■■□□□ 1.06
CMTM4-201ENST00000330687 RINT1Q6NUQ1 792 aa21.65■■□□□ 1.06
CMTM4-201ENST00000330687 FBXO33Q7Z6M2 555 aa21.65■■□□□ 1.06
CMTM4-201ENST00000330687 CD101Q93033 1021 aa21.65■■□□□ 1.06
CMTM4-201ENST00000330687 PAFAH2Q99487 392 aa21.65■■□□□ 1.06
CMTM4-201ENST00000330687 RIOX1Q9H6W3 641 aa21.65■■□□□ 1.06
CMTM4-201ENST00000330687 SAE1Q9UBE0 346 aaPredicted RBP21.65■■□□□ 1.06
CMTM4-201ENST00000330687 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.65■■□□□ 1.06
CMTM4-201ENST00000330687 DCAF8L1A6NGE4 600 aa21.64■■□□□ 1.06
CMTM4-201ENST00000330687 PIK3CDO00329 1044 aa21.64■■□□□ 1.06
CMTM4-201ENST00000330687 ZNF200P98182 395 aaPredicted RBP21.64■■□□□ 1.06
CMTM4-201ENST00000330687 BCORQ6W2J9 1755 aa21.64■■□□□ 1.06
CMTM4-201ENST00000330687 AZIN2Q96A70 460 aa21.64■■□□□ 1.06
CMTM4-201ENST00000330687 MTO1Q9Y2Z2 717 aaKnown RBP21.64■■□□□ 1.06
CMTM4-201ENST00000330687 I3L4J1 428 aa21.64■■□□□ 1.05
CMTM4-201ENST00000330687 NTSR2O95665 410 aa21.64■■□□□ 1.05
CMTM4-201ENST00000330687 VCLP18206 1134 aa21.64■■□□□ 1.05
CMTM4-201ENST00000330687 MXI1P50539 228 aa21.64■■□□□ 1.05
CMTM4-201ENST00000330687 ZNF568Q3ZCX4 644 aa21.64■■□□□ 1.05
CMTM4-201ENST00000330687 SLC44A4Q53GD3 710 aa21.64■■□□□ 1.05
CMTM4-201ENST00000330687 GSDMBQ8TAX9 411 aa21.64■■□□□ 1.05
CMTM4-201ENST00000330687 C11orf70Q9BRQ4 267 aa21.64■■□□□ 1.05
CMTM4-201ENST00000330687 SYT11Q9BT88 431 aa21.64■■□□□ 1.05
CMTM4-201ENST00000330687 TMEM121Q9BTD3 319 aa21.64■■□□□ 1.05
CMTM4-201ENST00000330687 PI4K2AQ9BTU6 479 aa21.64■■□□□ 1.05
CMTM4-201ENST00000330687 LIN28AQ9H9Z2 209 aaKnown RBP21.64■■□□□ 1.05
CMTM4-201ENST00000330687 PAIP2BQ9ULR5 123 aaKnown RBP21.64■■□□□ 1.05
CMTM4-201ENST00000330687 RPL26L1Q9UNX3 145 aaKnown RBP21.64■■□□□ 1.05
CMTM4-201ENST00000330687 DOLKQ9UPQ8 538 aa21.64■■□□□ 1.05
CMTM4-201ENST00000330687 CAPN8A6NHC0 703 aa21.64■■□□□ 1.05
CMTM4-201ENST00000330687 E5RJQ4 531 aa21.64■■□□□ 1.05
CMTM4-201ENST00000330687 EML1O00423 815 aa21.64■■□□□ 1.05
CMTM4-201ENST00000330687 PRPF4O43172 522 aaKnown RBP eCLIP21.64■■□□□ 1.05
CMTM4-201ENST00000330687 CRKLP46109 303 aaKnown RBP21.64■■□□□ 1.05
CMTM4-201ENST00000330687 HPCAP84074 193 aa21.64■■□□□ 1.05
CMTM4-201ENST00000330687 CENPUQ71F23 418 aa21.64■■□□□ 1.05
CMTM4-201ENST00000330687 EIF2AK1Q9BQI3 630 aaKnown RBP21.64■■□□□ 1.05
CMTM4-201ENST00000330687 TMPRSS6Q8IU80 811 aa21.63■■□□□ 1.05
CMTM4-201ENST00000330687 PSPC1Q8WXF1 523 aaKnown RBP21.63■■□□□ 1.05
CMTM4-201ENST00000330687 CBWD1Q9BRT8 395 aa21.63■■□□□ 1.05
CMTM4-201ENST00000330687 PRR5-ARHGAP8B1AHC4 643 aa21.63■■□□□ 1.05
CMTM4-201ENST00000330687 MAN1A1P33908 653 aa21.63■■□□□ 1.05
CMTM4-201ENST00000330687 CCR3P51677 355 aa21.63■■□□□ 1.05
CMTM4-201ENST00000330687 ARHGAP8P85298 464 aa21.63■■□□□ 1.05
CMTM4-201ENST00000330687 CYTH1Q15438 398 aa21.63■■□□□ 1.05
CMTM4-201ENST00000330687 ZCCHC23Q6ZST2 131 aa21.63■■□□□ 1.05
CMTM4-201ENST00000330687 BBOF1Q8ND07 529 aa21.63■■□□□ 1.05
CMTM4-201ENST00000330687 A8MXQ7 604 aa21.62■■□□□ 1.05
CMTM4-201ENST00000330687 ZMPSTE24O75844 475 aa21.62■■□□□ 1.05
CMTM4-201ENST00000330687 VAMP7P51809 220 aa21.62■■□□□ 1.05
CMTM4-201ENST00000330687 AQP5P55064 265 aa21.62■■□□□ 1.05
CMTM4-201ENST00000330687 CYLC2Q14093 348 aaPredicted RBP21.62■■□□□ 1.05
CMTM4-201ENST00000330687 HIC1Q14526 733 aa21.62■■□□□ 1.05
CMTM4-201ENST00000330687 RALGPS1Q5JS13 557 aa21.62■■□□□ 1.05
CMTM4-201ENST00000330687 ZBTB46Q86UZ6 589 aa21.62■■□□□ 1.05
CMTM4-201ENST00000330687 NUP188Q5SRE5 1749 aa21.62■■□□□ 1.05
CMTM4-201ENST00000330687 NELFEP18615 380 aaKnown RBP21.62■■□□□ 1.05
CMTM4-201ENST00000330687 FMO1Q01740 532 aa21.62■■□□□ 1.05
CMTM4-201ENST00000330687 ZC3H3Q8IXZ2 948 aaKnown RBP21.62■■□□□ 1.05
CMTM4-201ENST00000330687 SEPT12Q8IYM1 358 aa21.62■■□□□ 1.05
CMTM4-201ENST00000330687 GALNT4Q8N4A0 578 aa21.62■■□□□ 1.05
CMTM4-201ENST00000330687 ETNPPLQ8TBG4 499 aa21.62■■□□□ 1.05
CMTM4-201ENST00000330687 PRPF18Q99633 342 aaKnown RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms