RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 PPEF2O14830 753 aa18.01■□□□□ 0.47
DDX41-201ENST00000330503 CD19P15391 556 aa18.01■□□□□ 0.47
DDX41-201ENST00000330503 AKAP5P24588 427 aa18.01■□□□□ 0.47
DDX41-201ENST00000330503 NKX3-2P78367 333 aa18.01■□□□□ 0.47
DDX41-201ENST00000330503 FEZF2Q8TBJ5 459 aa18.01■□□□□ 0.47
DDX41-201ENST00000330503 C18orf25Q96B23 403 aaPredicted RBP18.01■□□□□ 0.47
DDX41-201ENST00000330503 TMEM176AQ96HP8 235 aa18.01■□□□□ 0.47
DDX41-201ENST00000330503 NAP1L3Q99457 506 aaPredicted RBP18.01■□□□□ 0.47
DDX41-201ENST00000330503 LHX5Q9H2C1 402 aa18.01■□□□□ 0.47
DDX41-201ENST00000330503 PARVAQ9NVD7 372 aa18.01■□□□□ 0.47
DDX41-201ENST00000330503 CNTN3Q9P232 1028 aa18.01■□□□□ 0.47
DDX41-201ENST00000330503 CYTH4Q9UIA0 394 aa18.01■□□□□ 0.47
DDX41-201ENST00000330503 PIN4Q9Y237 131 aaKnown RBP18.01■□□□□ 0.47
DDX41-201ENST00000330503 SEPT4O43236 478 aa18.01■□□□□ 0.47
DDX41-201ENST00000330503 RECQL4O94761 1208 aa18.01■□□□□ 0.47
DDX41-201ENST00000330503 P4HA1P13674 534 aa18.01■□□□□ 0.47
DDX41-201ENST00000330503 SLC1A1P43005 524 aa18.01■□□□□ 0.47
DDX41-201ENST00000330503 RWDD2BP57060 319 aa18.01■□□□□ 0.47
DDX41-201ENST00000330503 CELF4Q9BZC1 486 aaKnown RBP18.01■□□□□ 0.47
DDX41-201ENST00000330503 SLITRK6Q9H5Y7 841 aa18.01■□□□□ 0.47
DDX41-201ENST00000330503 TUBGCP4Q9UGJ1 667 aa18.01■□□□□ 0.47
DDX41-201ENST00000330503 AMACRQ9UHK6 382 aa18.01■□□□□ 0.47
DDX41-201ENST00000330503 SCINQ9Y6U3 715 aa18.01■□□□□ 0.47
DDX41-201ENST00000330503 RALGAPA2Q2PPJ7 1873 aa18.01■□□□□ 0.47
DDX41-201ENST00000330503 CALB1P05937 261 aa18■□□□□ 0.47
DDX41-201ENST00000330503 YARSP54577 528 aaKnown RBP18■□□□□ 0.47
DDX41-201ENST00000330503 PTPN11Q06124 597 aaPredicted RBP18■□□□□ 0.47
DDX41-201ENST00000330503 INCA1Q0VD86 236 aa18■□□□□ 0.47
DDX41-201ENST00000330503 KCTD19Q17RG1 926 aaPredicted RBP18■□□□□ 0.47
DDX41-201ENST00000330503 DAB2IPQ5VWQ8 1189 aa18■□□□□ 0.47
DDX41-201ENST00000330503 GDF6Q6KF10 455 aaPredicted RBP18■□□□□ 0.47
DDX41-201ENST00000330503 APOL6Q9BWW8 343 aa18■□□□□ 0.47
DDX41-201ENST00000330503 ST7Q9NRC1 585 aa18■□□□□ 0.47
DDX41-201ENST00000330503 GTF2IRD1Q9UHL9 959 aa18■□□□□ 0.47
DDX41-201ENST00000330503 SCN10AQ9Y5Y9 1956 aa18■□□□□ 0.47
DDX41-201ENST00000330503 TCRBV7S2A1N4TA0A589 114 aa17.99■□□□□ 0.47
DDX41-201ENST00000330503 TMEM191CA6NGB0 347 aa17.99■□□□□ 0.47
DDX41-201ENST00000330503 TLR3O15455 904 aaKnown RBP17.99■□□□□ 0.47
DDX41-201ENST00000330503 MED7O43513 233 aa17.99■□□□□ 0.47
DDX41-201ENST00000330503 TNNT3P45378 269 aaPredicted RBP17.99■□□□□ 0.47
DDX41-201ENST00000330503 RPL7AP62424 266 aaKnown RBP17.99■□□□□ 0.47
DDX41-201ENST00000330503 SMC1AQ14683 1233 aaKnown RBP17.99■□□□□ 0.47
DDX41-201ENST00000330503 CLUL1Q15846 466 aa17.99■□□□□ 0.47
DDX41-201ENST00000330503 ERICH1Q86X53 443 aa17.99■□□□□ 0.47
DDX41-201ENST00000330503 IFT81Q8WYA0 676 aa17.99■□□□□ 0.47
DDX41-201ENST00000330503 TRIM6Q9C030 488 aaPredicted RBP17.99■□□□□ 0.47
DDX41-201ENST00000330503 BARX2Q9UMQ3 279 aaPredicted RBP17.99■□□□□ 0.47
DDX41-201ENST00000330503 ADAMTS4O75173 837 aa17.99■□□□□ 0.47
DDX41-201ENST00000330503 XKR4Q5GH76 650 aa17.99■□□□□ 0.47
DDX41-201ENST00000330503 GLRA4Q5JXX5 417 aa17.99■□□□□ 0.47
DDX41-201ENST00000330503 PPP1R15BQ5SWA1 713 aa17.99■□□□□ 0.47
DDX41-201ENST00000330503 SEL1L2Q5TEA6 688 aa17.99■□□□□ 0.47
DDX41-201ENST00000330503 TAF2Q6P1X5 1199 aa17.99■□□□□ 0.47
DDX41-201ENST00000330503 FAM228AQ86W67 206 aa17.99■□□□□ 0.47
DDX41-201ENST00000330503 SLC13A5Q86YT5 568 aaPredicted RBP17.99■□□□□ 0.47
DDX41-201ENST00000330503 PRELID2Q8N945 189 aa17.99■□□□□ 0.47
DDX41-201ENST00000330503 WNT8BQ93098 351 aa17.99■□□□□ 0.47
DDX41-201ENST00000330503 DDX27Q96GQ7 796 aaKnown RBP17.99■□□□□ 0.47
DDX41-201ENST00000330503 RNF186Q9NXI6 227 aa17.99■□□□□ 0.47
DDX41-201ENST00000330503 KLK14Q9P0G3 267 aa17.99■□□□□ 0.47
DDX41-201ENST00000330503 NFU1Q9UMS0 254 aa17.99■□□□□ 0.47
DDX41-201ENST00000330503 SCN1AP35498 2009 aa17.99■□□□□ 0.47
DDX41-201ENST00000330503 PCNTO95613 3336 aa17.99■□□□□ 0.47
DDX41-201ENST00000330503 O00370 1275 aa17.98■□□□□ 0.47
DDX41-201ENST00000330503 RARBP10826 455 aa17.98■□□□□ 0.47
DDX41-201ENST00000330503 CCND3P30281 292 aaPredicted RBP17.98■□□□□ 0.47
DDX41-201ENST00000330503 NDST1P52848 882 aa17.98■□□□□ 0.47
DDX41-201ENST00000330503 TAS2R40P59535 323 aa17.98■□□□□ 0.47
DDX41-201ENST00000330503 MRPS6P82932 125 aaKnown RBP17.98■□□□□ 0.47
DDX41-201ENST00000330503 NOGQ13253 232 aa17.98■□□□□ 0.47
DDX41-201ENST00000330503 SIX1Q15475 284 aaPredicted RBP17.98■□□□□ 0.47
DDX41-201ENST00000330503 PTPN20Q4JDL3 420 aa17.98■□□□□ 0.47
DDX41-201ENST00000330503 CYP4A22Q5TCH4 519 aa17.98■□□□□ 0.47
DDX41-201ENST00000330503 SMG8Q8ND04 991 aaKnown RBP17.98■□□□□ 0.47
DDX41-201ENST00000330503 ZBTB9Q96C00 473 aa17.98■□□□□ 0.47
DDX41-201ENST00000330503 VIPAS39Q9H9C1 493 aa17.98■□□□□ 0.47
DDX41-201ENST00000330503 TJP2Q9UDY2 1190 aa17.98■□□□□ 0.47
DDX41-201ENST00000330503 HPCAL4Q9UM19 191 aa17.98■□□□□ 0.47
DDX41-201ENST00000330503 SMIM28A0A1B0GU29 152 aa17.98■□□□□ 0.47
DDX41-201ENST00000330503 TTI1O43156 1089 aa17.98■□□□□ 0.47
DDX41-201ENST00000330503 MICAL2O94851 1124 aa17.98■□□□□ 0.47
DDX41-201ENST00000330503 VDRP11473 427 aa17.98■□□□□ 0.47
DDX41-201ENST00000330503 CYP3A5P20815 502 aa17.98■□□□□ 0.47
DDX41-201ENST00000330503 EPHB4P54760 987 aa17.98■□□□□ 0.47
DDX41-201ENST00000330503 MYO1EQ12965 1108 aa17.98■□□□□ 0.47
DDX41-201ENST00000330503 CNGA2Q16280 664 aa17.98■□□□□ 0.47
DDX41-201ENST00000330503 C9orf57Q5W0N0 161 aa17.98■□□□□ 0.47
DDX41-201ENST00000330503 SND1Q7KZF4 910 aaKnown RBP eCLIP17.98■□□□□ 0.47
DDX41-201ENST00000330503 ARRDC4Q8NCT1 418 aa17.98■□□□□ 0.47
DDX41-201ENST00000330503 BEST2Q8NFU1 509 aa17.98■□□□□ 0.47
DDX41-201ENST00000330503 CCDC26Q8TAB7 109 aa17.98■□□□□ 0.47
DDX41-201ENST00000330503 HEXIM2Q96MH2 286 aaKnown RBP17.98■□□□□ 0.47
DDX41-201ENST00000330503 FAM124BQ9H5Z6 455 aaPredicted RBP17.98■□□□□ 0.47
DDX41-201ENST00000330503 SPC25Q9HBM1 224 aa17.98■□□□□ 0.47
DDX41-201ENST00000330503 H3BQF6 201 aa17.97■□□□□ 0.47
DDX41-201ENST00000330503 FAM153BP0C7A2 387 aa17.97■□□□□ 0.47
DDX41-201ENST00000330503 ELNP15502 786 aa17.97■□□□□ 0.47
DDX41-201ENST00000330503 OGDHQ02218 1023 aa17.97■□□□□ 0.47
DDX41-201ENST00000330503 ZNF252P-AS1Q0IIN9 211 aa17.97■□□□□ 0.47
DDX41-201ENST00000330503 FAM153CQ494X1 144 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms