RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 ARHGAP28Q9P2N2 729 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 FBXO40Q9UH90 709 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 CHKBQ9Y259 395 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 C15orf41Q9Y2V0 281 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 ASMTLO95671 621 aa18.35■□□□□ 0.53
PTP4A3-201ENST00000329397 KCNA2P16389 499 aa18.35■□□□□ 0.53
PTP4A3-201ENST00000329397 GARTP22102 1010 aa18.35■□□□□ 0.53
PTP4A3-201ENST00000329397 CA4P22748 312 aa18.35■□□□□ 0.53
PTP4A3-201ENST00000329397 SCARA5Q6ZMJ2 495 aa18.35■□□□□ 0.53
PTP4A3-201ENST00000329397 EXD1Q8NHP7 514 aa18.35■□□□□ 0.53
PTP4A3-201ENST00000329397 FEZF2Q8TBJ5 459 aa18.35■□□□□ 0.53
PTP4A3-201ENST00000329397 SLITRK1Q96PX8 696 aa18.35■□□□□ 0.53
PTP4A3-201ENST00000329397 LBHD1Q9BQE6 289 aaPredicted RBP18.35■□□□□ 0.53
PTP4A3-201ENST00000329397 ALG13Q9NP73 1137 aaKnown RBP18.35■□□□□ 0.53
PTP4A3-201ENST00000329397 PGAP2Q9UHJ9 254 aa18.35■□□□□ 0.53
PTP4A3-201ENST00000329397 LRRD1A4D1F6 860 aa18.35■□□□□ 0.53
PTP4A3-201ENST00000329397 PEX10O60683 326 aa18.35■□□□□ 0.53
PTP4A3-201ENST00000329397 TCEA3O75764 348 aa18.35■□□□□ 0.53
PTP4A3-201ENST00000329397 POLGP54098 1239 aaPredicted RBP18.35■□□□□ 0.53
PTP4A3-201ENST00000329397 RIPK1Q13546 671 aa18.35■□□□□ 0.53
PTP4A3-201ENST00000329397 ZC3H12AQ5D1E8 599 aaKnown RBP18.35■□□□□ 0.53
PTP4A3-201ENST00000329397 KCNT1Q5JUK3 1230 aa18.35■□□□□ 0.53
PTP4A3-201ENST00000329397 PLEKHA7Q6IQ23 1121 aa18.35■□□□□ 0.53
PTP4A3-201ENST00000329397 VSIG1Q86XK7 387 aa18.35■□□□□ 0.53
PTP4A3-201ENST00000329397 ANKRD35Q8N283 1001 aa18.35■□□□□ 0.53
PTP4A3-201ENST00000329397 ZNF570Q96NI8 536 aa18.35■□□□□ 0.53
PTP4A3-201ENST00000329397 TJP2Q9UDY2 1190 aa18.35■□□□□ 0.53
PTP4A3-201ENST00000329397 ARID2Q68CP9 1835 aa18.34■□□□□ 0.53
PTP4A3-201ENST00000329397 SGK1O00141 431 aa18.34■□□□□ 0.53
PTP4A3-201ENST00000329397 DNALI1O14645 258 aaPredicted RBP18.34■□□□□ 0.53
PTP4A3-201ENST00000329397 TBC1D12O60347 775 aa18.34■□□□□ 0.53
PTP4A3-201ENST00000329397 ZBED4O75132 1171 aa18.34■□□□□ 0.53
PTP4A3-201ENST00000329397 DGAT1O75907 488 aa18.34■□□□□ 0.53
PTP4A3-201ENST00000329397 CBX6O95503 412 aa18.34■□□□□ 0.53
PTP4A3-201ENST00000329397 CST3P01034 146 aaPredicted RBP18.34■□□□□ 0.53
PTP4A3-201ENST00000329397 TNFSF9P41273 254 aa18.34■□□□□ 0.53
PTP4A3-201ENST00000329397 ACTR2P61160 394 aa18.34■□□□□ 0.53
PTP4A3-201ENST00000329397 PDIA2Q13087 525 aaKnown RBP18.34■□□□□ 0.53
PTP4A3-201ENST00000329397 PSMD6Q15008 389 aa18.34■□□□□ 0.53
PTP4A3-201ENST00000329397 WDR72Q3MJ13 1102 aa18.34■□□□□ 0.53
PTP4A3-201ENST00000329397 VSIG10LQ86VR7 867 aa18.34■□□□□ 0.53
PTP4A3-201ENST00000329397 ATP6V0A1Q93050 837 aa18.34■□□□□ 0.53
PTP4A3-201ENST00000329397 TRIM11Q96F44 468 aa18.34■□□□□ 0.53
PTP4A3-201ENST00000329397 JPH1Q9HDC5 661 aaPredicted RBP18.34■□□□□ 0.53
PTP4A3-201ENST00000329397 FER1L6Q2WGJ9 1857 aa18.34■□□□□ 0.53
PTP4A3-201ENST00000329397 PPP1R12AO14974 1030 aaPredicted RBP18.34■□□□□ 0.53
PTP4A3-201ENST00000329397 SSTR1P30872 391 aa18.34■□□□□ 0.53
PTP4A3-201ENST00000329397 FSTL1Q12841 308 aa18.34■□□□□ 0.53
PTP4A3-201ENST00000329397 PRAMEF18Q5VWM3 479 aa18.34■□□□□ 0.53
PTP4A3-201ENST00000329397 PPP1R21Q6ZMI0 780 aa18.34■□□□□ 0.53
PTP4A3-201ENST00000329397 ZNF606Q8WXB4 792 aa18.34■□□□□ 0.53
PTP4A3-201ENST00000329397 ITFG2Q969R8 447 aa18.34■□□□□ 0.53
PTP4A3-201ENST00000329397 MRPL47Q9HD33 250 aaKnown RBP18.34■□□□□ 0.53
PTP4A3-201ENST00000329397 VWA5AO00534 786 aa18.33■□□□□ 0.53
PTP4A3-201ENST00000329397 UNC5CO95185 931 aa18.33■□□□□ 0.53
PTP4A3-201ENST00000329397 GDF10P55107 478 aa18.33■□□□□ 0.53
PTP4A3-201ENST00000329397 EMC2Q15006 297 aa18.33■□□□□ 0.53
PTP4A3-201ENST00000329397 SNRNP48Q6IEG0 339 aaKnown RBP18.33■□□□□ 0.53
PTP4A3-201ENST00000329397 GBP7Q8N8V2 638 aaPredicted RBP18.33■□□□□ 0.53
PTP4A3-201ENST00000329397 ZNF668Q96K58 619 aaPredicted RBP18.33■□□□□ 0.53
PTP4A3-201ENST00000329397 SENP7Q9BQF6 1050 aa18.33■□□□□ 0.53
PTP4A3-201ENST00000329397 MSTO1Q9BUK6 570 aa18.33■□□□□ 0.53
PTP4A3-201ENST00000329397 MAK16Q9BXY0 300 aaKnown RBP18.33■□□□□ 0.53
PTP4A3-201ENST00000329397 PDLIM7Q9NR12 457 aa18.33■□□□□ 0.53
PTP4A3-201ENST00000329397 NKX1-2Q9UD57 310 aaPredicted RBP18.33■□□□□ 0.53
PTP4A3-201ENST00000329397 ZC3H11AO75152 810 aaKnown RBP eCLIP18.33■□□□□ 0.522e-6■■■□□ 14.7
PTP4A3-201ENST00000329397 ALADP13716 330 aa18.33■□□□□ 0.52
PTP4A3-201ENST00000329397 PAX7P23759 505 aa18.33■□□□□ 0.52
PTP4A3-201ENST00000329397 BPIFB4P59827 614 aa18.33■□□□□ 0.52
PTP4A3-201ENST00000329397 SP2Q02086 613 aa18.33■□□□□ 0.52
PTP4A3-201ENST00000329397 ANKRD22Q5VYY1 191 aa18.33■□□□□ 0.52
PTP4A3-201ENST00000329397 DCUN1D2Q6PH85 259 aa18.33■□□□□ 0.52
PTP4A3-201ENST00000329397 ZBTB33Q86T24 672 aa18.33■□□□□ 0.52
PTP4A3-201ENST00000329397 ZNF677Q86XU0 584 aa18.33■□□□□ 0.52
PTP4A3-201ENST00000329397 MIEF2Q96C03 454 aa18.33■□□□□ 0.52
PTP4A3-201ENST00000329397 CFAP57Q96MR6 1250 aa18.33■□□□□ 0.52
PTP4A3-201ENST00000329397 KIAA1683Q9H0B3 1180 aa18.33■□□□□ 0.52
PTP4A3-201ENST00000329397 ZWILCHQ9H900 591 aa18.33■□□□□ 0.52
PTP4A3-201ENST00000329397 NUMBLQ9Y6R0 609 aa18.33■□□□□ 0.52
PTP4A3-201ENST00000329397 ITGBL1O95965 494 aaPredicted RBP18.32■□□□□ 0.52
PTP4A3-201ENST00000329397 CCND2P30279 289 aa18.32■□□□□ 0.52
PTP4A3-201ENST00000329397 OVGP1Q12889 678 aa18.32■□□□□ 0.52
PTP4A3-201ENST00000329397 NCOA4Q13772 614 aa18.32■□□□□ 0.52
PTP4A3-201ENST00000329397 MSS51Q4VC12 460 aa18.32■□□□□ 0.52
PTP4A3-201ENST00000329397 MCPH1Q8NEM0 835 aa18.32■□□□□ 0.52
PTP4A3-201ENST00000329397 NOP53Q9NZM5 478 aaKnown RBP18.32■□□□□ 0.52
PTP4A3-201ENST00000329397 UPP2O95045 317 aa18.32■□□□□ 0.52
PTP4A3-201ENST00000329397 WEE2P0C1S8 567 aa18.32■□□□□ 0.52
PTP4A3-201ENST00000329397 ATP4AP20648 1035 aa18.32■□□□□ 0.52
PTP4A3-201ENST00000329397 ORC1Q13415 861 aa18.32■□□□□ 0.52
PTP4A3-201ENST00000329397 RNF43Q68DV7 783 aa18.32■□□□□ 0.52
PTP4A3-201ENST00000329397 SPOCD1Q6ZMY3 1216 aa18.32■□□□□ 0.52
PTP4A3-201ENST00000329397 SUPT20HQ8NEM7 779 aa18.32■□□□□ 0.52
PTP4A3-201ENST00000329397 RSRC1Q96IZ7 334 aaKnown RBP18.32■□□□□ 0.52
PTP4A3-201ENST00000329397 SMC6Q96SB8 1091 aa18.32■□□□□ 0.52
PTP4A3-201ENST00000329397 PARVAQ9NVD7 372 aa18.32■□□□□ 0.52
PTP4A3-201ENST00000329397 SLC9A2Q9UBY0 812 aa18.32■□□□□ 0.52
PTP4A3-201ENST00000329397 PSAPP07602 524 aa18.31■□□□□ 0.52
PTP4A3-201ENST00000329397 KRT4P19013 534 aa18.31■□□□□ 0.52
PTP4A3-201ENST00000329397 GLRA2P23416 452 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms