RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 TRABDQ9H4I3 376 aa9.2□□□□□ -0.94
CLK1-201ENST00000321356 JPH1Q9HDC5 661 aaPredicted RBP9.2□□□□□ -0.94
CLK1-201ENST00000321356 RBAKQ9NYW8 714 aaPredicted RBP9.2□□□□□ -0.94
CLK1-201ENST00000321356 NOP53Q9NZM5 478 aaKnown RBP9.2□□□□□ -0.94
CLK1-201ENST00000321356 SLC9A2Q9UBY0 812 aa9.2□□□□□ -0.94
CLK1-201ENST00000321356 TRIM33Q9UPN9 1127 aa9.2□□□□□ -0.94
CLK1-201ENST00000321356 SMG5Q9UPR3 1016 aaKnown RBP9.2□□□□□ -0.94
CLK1-201ENST00000321356 SHOC2Q9UQ13 582 aa9.2□□□□□ -0.94
CLK1-201ENST00000321356 L3MBTL1Q9Y468 752 aa9.2□□□□□ -0.94
CLK1-201ENST00000321356 CNTNAP2Q9UHC6 1331 aa9.2□□□□□ -0.94
CLK1-201ENST00000321356 hCG_1818297A0A087WSY0 165 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 A0A0B4J269 797 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 A8MUI8 341 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 NDC80O14777 642 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 TYROBPO43914 113 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 EDF1O60869 148 aaKnown RBP9.19□□□□□ -0.94
CLK1-201ENST00000321356 LSM8O95777 96 aaKnown RBP9.19□□□□□ -0.94
CLK1-201ENST00000321356 KRT1P04264 644 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 ITGAVP06756 1048 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 ZSCAN5DPP0CG00 497 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 GJC1P36383 396 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 ARSEP51690 589 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 SLC8A3P57103 927 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 ADCY1Q08828 1119 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 MTMR2Q13614 643 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 SPARCL1Q14515 664 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 PKN2Q16513 984 aaKnown RBP9.19□□□□□ -0.94
CLK1-201ENST00000321356 PARP6Q2NL67 630 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 WDR72Q3MJ13 1102 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 ZBTB41Q5SVQ8 909 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 PPP1R15BQ5SWA1 713 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 SLFN12LQ6IEE8 588 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 ASAP3Q8TDY4 903 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 FBF1Q8TES7 1133 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 NSMCE1Q8WV22 266 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 ZNF606Q8WXB4 792 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 PRCCQ92733 491 aaPredicted RBP9.19□□□□□ -0.94
CLK1-201ENST00000321356 UTP4Q969X6 686 aaKnown RBP9.19□□□□□ -0.94
CLK1-201ENST00000321356 ATG4CQ96DT6 458 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 WNK4Q96J92 1243 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 CDHR1Q96JP9 859 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 PORCNQ9H237 461 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 LRMDAQ9H2I8 198 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 RPAP3Q9H6T3 665 aaPredicted RBP9.19□□□□□ -0.94
CLK1-201ENST00000321356 PCDH9Q9HC56 1237 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 SSU72Q9NP77 194 aaKnown RBP9.19□□□□□ -0.94
CLK1-201ENST00000321356 ZNF277Q9NRM2 450 aaPredicted RBP9.19□□□□□ -0.94
CLK1-201ENST00000321356 TXLNGQ9NUQ3 528 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 FETUBQ9UGM5 382 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 SLC24A2Q9UI40 661 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 GRID1Q9ULK0 1009 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 ZNF148Q9UQR1 794 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.19□□□□□ -0.94
CLK1-201ENST00000321356 USH1CQ9Y6N9 552 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 IVNS1ABPQ9Y6Y0 642 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 ADGRA2Q96PE1 1338 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 LOC285556D6RIA3 1793 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 LCTP09848 1927 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 DOCK1Q14185 1865 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 PHIPQ8WWQ0 1821 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 SPAG7O75391 227 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 ATP5HO75947 161 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 LDHAP00338 332 aaKnown RBP9.19□□□□□ -0.94
CLK1-201ENST00000321356 CALB1P05937 261 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 SUPT20HL2P0C7V6 817 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 ATP4AP20648 1035 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 IBSPP21815 317 aaPredicted RBP9.19□□□□□ -0.94
CLK1-201ENST00000321356 GLRA2P23416 452 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 ARL2P36404 184 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 SSR1P43307 286 aaKnown RBP9.19□□□□□ -0.94
CLK1-201ENST00000321356 NAMPTP43490 491 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 CCNG1P51959 295 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 OGDHQ02218 1023 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 GPS1Q13098 491 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 DNAJC3Q13217 504 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 NCOA4Q13772 614 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 SUPT20HL1Q3ZLR7 823 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 ZC3H12AQ5D1E8 599 aaKnown RBP9.19□□□□□ -0.94
CLK1-201ENST00000321356 EFHC2Q5JST6 749 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 SPDYAQ5MJ70 313 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 SMYD5Q6GMV2 418 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 FAM47EQ6ZV65 393 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 NIPA2Q8N8Q9 360 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 OR5B17Q8NGF7 314 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 SLC35B2Q8TB61 432 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 NSUN6Q8TEA1 469 aaKnown RBP9.19□□□□□ -0.94
CLK1-201ENST00000321356 ZBTB45Q96K62 511 aaPredicted RBP9.19□□□□□ -0.94
CLK1-201ENST00000321356 MSTO1Q9BUK6 570 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 MYLK2Q9H1R3 596 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 DHX33Q9H6R0 707 aaKnown RBP9.19□□□□□ -0.94
CLK1-201ENST00000321356 KLHL11Q9NVR0 708 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 DONSONQ9NYP3 566 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 ZNRF3Q9ULT6 936 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 PHTF1Q9UMS5 762 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 CHKBQ9Y259 395 aa9.19□□□□□ -0.94
CLK1-201ENST00000321356 CTDP1Q9Y5B0 961 aaPredicted RBP9.19□□□□□ -0.94
CLK1-201ENST00000321356 TNS1Q9HBL0 1735 aaKnown RBP9.18□□□□□ -0.94
CLK1-201ENST00000321356 SPATA31C2B4DYI2 1134 aa9.18□□□□□ -0.94
CLK1-201ENST00000321356 F8VP50 259 aa9.18□□□□□ -0.94
CLK1-201ENST00000321356 KIF1CO43896 1103 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms