RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 SCTRP47872 440 aa17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 KCNF1Q9H3M0 494 aa17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 SMARCAD1Q9H4L7 1026 aa17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 FAM83EQ2M2I3 478 aa17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 BARGINQ6ZT62 677 aa17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 ERP44Q9BS26 406 aa17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 NRKQ7Z2Y5 1582 aa17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 CALB2P22676 271 aa17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 MAGEA4P43358 317 aa17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 TTLL4Q14679 1199 aa17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 E4F1Q66K89 784 aaPredicted RBP17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 USP21Q9UK80 565 aa17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 RRM2P31350 389 aa17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 EFNA5P52803 228 aa17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 ERFEQ4G0M1 354 aa17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 CACHD1Q5VU97 1274 aa17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 TRIM65Q6PJ69 517 aa17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 ZFRQ96KR1 1074 aaKnown RBP17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 CATSPER2Q96P56 530 aa17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 CD248Q9HCU0 757 aa17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 DGKIO75912 1065 aa17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 NR1I3Q14994 352 aa17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 OR8H2Q8N162 312 aa17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 ILKAPQ9H0C8 392 aaPredicted RBP17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 GOLPH3Q9H4A6 298 aa17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 ARAP3Q8WWN8 1544 aa17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 CYP26A1O43174 497 aa17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 C1DQ13901 141 aaKnown RBP17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 OLFM1Q99784 485 aa17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 RAD51CO43502 376 aa17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 FAM45BPQ6NSW5 357 aa17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 SUGP1Q8IWZ8 645 aaKnown RBP17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 SPATA16Q9BXB7 569 aa17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 SPRTNQ9H040 489 aaPredicted RBP17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 PDK1Q15118 436 aa17.58■□□□□ 0.41
SMCHD1-201ENST00000320876 NDUFA5Q16718 116 aa17.58■□□□□ 0.41
SMCHD1-201ENST00000320876 CDH24Q86UP0 819 aa17.58■□□□□ 0.41
SMCHD1-201ENST00000320876 PPIL6Q8IXY8 311 aa17.58■□□□□ 0.41
SMCHD1-201ENST00000320876 V9GYQ6 96 aa17.58■□□□□ 0.41
SMCHD1-201ENST00000320876 O00370 1275 aa17.58■□□□□ 0.41
SMCHD1-201ENST00000320876 P4HBP07237 508 aaKnown RBP17.58■□□□□ 0.41
SMCHD1-201ENST00000320876 CAPN1P07384 714 aa17.58■□□□□ 0.41
SMCHD1-201ENST00000320876 NPEPPSP55786 919 aa17.58■□□□□ 0.41
SMCHD1-201ENST00000320876 STILQ15468 1287 aa17.58■□□□□ 0.41
SMCHD1-201ENST00000320876 JAMLQ86YT9 394 aa17.58■□□□□ 0.41
SMCHD1-201ENST00000320876 CCDC126Q96EE4 140 aa17.58■□□□□ 0.41
SMCHD1-201ENST00000320876 LBHD1Q9BQE6 289 aaPredicted RBP17.58■□□□□ 0.41
SMCHD1-201ENST00000320876 CTNNAL1Q9UBT7 734 aa17.58■□□□□ 0.41
SMCHD1-201ENST00000320876 NUMA1Q14980 2115 aa17.58■□□□□ 0.41
SMCHD1-201ENST00000320876 FCER1AP12319 257 aa17.58■□□□□ 0.41
SMCHD1-201ENST00000320876 PI16Q6UXB8 463 aa17.58■□□□□ 0.41
SMCHD1-201ENST00000320876 ZNF467Q7Z7K2 595 aaPredicted RBP17.58■□□□□ 0.41
SMCHD1-201ENST00000320876 NSUN6Q8TEA1 469 aaKnown RBP17.58■□□□□ 0.41
SMCHD1-201ENST00000320876 SCFD2Q8WU76 684 aa17.58■□□□□ 0.41
SMCHD1-201ENST00000320876 LRRC39Q96DD0 335 aa17.58■□□□□ 0.41
SMCHD1-201ENST00000320876 RSAD1Q9HA92 442 aa17.58■□□□□ 0.41
SMCHD1-201ENST00000320876 NMRK1Q9NWW6 199 aa17.58■□□□□ 0.41
SMCHD1-201ENST00000320876 DYTNA2CJ06 578 aa17.58■□□□□ 0.4
SMCHD1-201ENST00000320876 A8MXQ7 604 aa17.58■□□□□ 0.4
SMCHD1-201ENST00000320876 USP17L15C9J2P7 530 aa17.58■□□□□ 0.4
SMCHD1-201ENST00000320876 USP17L13C9JLJ4 530 aa17.58■□□□□ 0.4
SMCHD1-201ENST00000320876 USP17L11C9JVI0 530 aa17.58■□□□□ 0.4
SMCHD1-201ENST00000320876 USP17L18D6R9N7 530 aa17.58■□□□□ 0.4
SMCHD1-201ENST00000320876 USP17L22D6RA61 530 aa17.58■□□□□ 0.4
SMCHD1-201ENST00000320876 USP17L17D6RBQ6 530 aa17.58■□□□□ 0.4
SMCHD1-201ENST00000320876 USP17L19D6RCP7 530 aa17.58■□□□□ 0.4
SMCHD1-201ENST00000320876 USP17L20D6RJB6 530 aa17.58■□□□□ 0.4
SMCHD1-201ENST00000320876 USP17L24Q0WX57 530 aa17.58■□□□□ 0.4
SMCHD1-201ENST00000320876 USP17L6PQ6QN14 398 aa17.58■□□□□ 0.4
SMCHD1-201ENST00000320876 SSTR3P32745 418 aaPredicted RBP17.58■□□□□ 0.4
SMCHD1-201ENST00000320876 FMO5P49326 533 aa17.58■□□□□ 0.4
SMCHD1-201ENST00000320876 ZIM3Q96PE6 472 aa17.58■□□□□ 0.4
SMCHD1-201ENST00000320876 SRPK1Q96SB4 655 aaKnown RBP17.58■□□□□ 0.4
SMCHD1-201ENST00000320876 MTSS1O43312 755 aa17.58■□□□□ 0.4
SMCHD1-201ENST00000320876 SRGNP10124 158 aa17.58■□□□□ 0.4
SMCHD1-201ENST00000320876 AKT1P31749 480 aa17.58■□□□□ 0.4
SMCHD1-201ENST00000320876 YWHABP31946 246 aaKnown RBP17.58■□□□□ 0.4
SMCHD1-201ENST00000320876 PLEKHG2Q9H7P9 1386 aa17.58■□□□□ 0.4
SMCHD1-201ENST00000320876 BICRAQ9NZM4 1560 aa17.58■□□□□ 0.4
SMCHD1-201ENST00000320876 SLC16A1P53985 500 aa17.58■□□□□ 0.4
SMCHD1-201ENST00000320876 CCZ1BP86790 482 aa17.58■□□□□ 0.4
SMCHD1-201ENST00000320876 CCZ1P86791 482 aaPredicted RBP17.58■□□□□ 0.4
SMCHD1-201ENST00000320876 MTFR1Q15390 333 aa17.58■□□□□ 0.4
SMCHD1-201ENST00000320876 SH3RF3Q8TEJ3 882 aaPredicted RBP17.58■□□□□ 0.4
SMCHD1-201ENST00000320876 PRRG3Q9BZD7 231 aa17.58■□□□□ 0.4
SMCHD1-201ENST00000320876 CLEC4MQ9H2X3 399 aaPredicted RBP17.58■□□□□ 0.4
SMCHD1-201ENST00000320876 STX7O15400 261 aaKnown RBP17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 ZNF23P17027 643 aa17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 MMRN1Q13201 1228 aa17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 UGT3A1Q6NUS8 523 aa17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 KDELC2Q7Z4H8 507 aa17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 OMA1Q96E52 524 aa17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 UBAP1Q9NZ09 502 aa17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 TSC22D2O75157 780 aa17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 RHOBTB1O94844 696 aa17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 SERPIND1P05546 499 aa17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 TBC1D10CQ8IV04 446 aa17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 USP38Q8NB14 1042 aa17.57■□□□□ 0.4
SMCHD1-201ENST00000320876 PGK2P07205 417 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms