RNA–Protein interactions for RNA: ENST00000318066.6

UBE2N-201, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2N, Length 5,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-201ENST00000318066 SNX17Q15036 470 aa19.86■□□□□ 0.77
UBE2N-201ENST00000318066 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.86■□□□□ 0.77
UBE2N-201ENST00000318066 GAS2O43903 313 aaKnown RBP19.86■□□□□ 0.77
UBE2N-201ENST00000318066 MCEEQ96PE7 176 aa19.86■□□□□ 0.77
UBE2N-201ENST00000318066 EEF2KO00418 725 aaKnown RBP19.85■□□□□ 0.77
UBE2N-201ENST00000318066 IGF2BP3O00425 579 aaKnown RBP eCLIP19.85■□□□□ 0.77
UBE2N-201ENST00000318066 CRYMQ14894 314 aa19.85■□□□□ 0.77
UBE2N-201ENST00000318066 SF3B3Q15393 1217 aaKnown RBP19.85■□□□□ 0.77
UBE2N-201ENST00000318066 EVPLLA8MZ36 301 aa19.85■□□□□ 0.77
UBE2N-201ENST00000318066 EXTL3O43909 919 aa19.85■□□□□ 0.77
UBE2N-201ENST00000318066 GPD1P21695 349 aa19.85■□□□□ 0.77
UBE2N-201ENST00000318066 ELMO2Q96JJ3 720 aa19.85■□□□□ 0.77
UBE2N-201ENST00000318066 NOD2Q9HC29 1040 aa19.85■□□□□ 0.77
UBE2N-201ENST00000318066 DYRK4Q9NR20 520 aa19.85■□□□□ 0.77
UBE2N-201ENST00000318066 CHMP2BQ9UQN3 213 aa19.85■□□□□ 0.77
UBE2N-201ENST00000318066 GLRA3O75311 464 aa19.85■□□□□ 0.77
UBE2N-201ENST00000318066 KLRC1P26715 233 aa19.85■□□□□ 0.77
UBE2N-201ENST00000318066 SPATA2LQ8IUW3 424 aaPredicted RBP19.85■□□□□ 0.77
UBE2N-201ENST00000318066 GTF3C2Q8WUA4 911 aaPredicted RBP19.85■□□□□ 0.77
UBE2N-201ENST00000318066 CPA5Q8WXQ8 436 aa19.85■□□□□ 0.77
UBE2N-201ENST00000318066 C20orf96Q9NUD7 363 aaPredicted RBP19.85■□□□□ 0.77
UBE2N-201ENST00000318066 SELENONQ9NZV5 590 aa19.85■□□□□ 0.77
UBE2N-201ENST00000318066 WHRNQ9P202 907 aa19.85■□□□□ 0.77
UBE2N-201ENST00000318066 OCM2P0CE71 109 aa19.85■□□□□ 0.77
UBE2N-201ENST00000318066 OCMP0CE72 109 aaPredicted RBP19.85■□□□□ 0.77
UBE2N-201ENST00000318066 SERPINB3P29508 390 aa19.85■□□□□ 0.77
UBE2N-201ENST00000318066 SLC29A2Q14542 456 aa19.85■□□□□ 0.77
UBE2N-201ENST00000318066 P3H2Q8IVL5 708 aa19.85■□□□□ 0.77
UBE2N-201ENST00000318066 PRMT7Q9NVM4 692 aaPredicted RBP19.85■□□□□ 0.77
UBE2N-201ENST00000318066 TUBGCP4Q9UGJ1 667 aa19.85■□□□□ 0.77
UBE2N-201ENST00000318066 CFAP99D6REC4 459 aa19.84■□□□□ 0.77
UBE2N-201ENST00000318066 RALBP11234 206 aa19.84■□□□□ 0.77
UBE2N-201ENST00000318066 SERPINB1P30740 379 aa19.84■□□□□ 0.77
UBE2N-201ENST00000318066 HSD17B3P37058 310 aa19.84■□□□□ 0.77
UBE2N-201ENST00000318066 COG2Q14746 738 aa19.84■□□□□ 0.77
UBE2N-201ENST00000318066 RFX8Q6ZV50 586 aa19.84■□□□□ 0.77
UBE2N-201ENST00000318066 SLC30A5Q8TAD4 765 aa19.84■□□□□ 0.77
UBE2N-201ENST00000318066 HIC2Q96JB3 615 aa19.84■□□□□ 0.77
UBE2N-201ENST00000318066 ZC3H11AO75152 810 aaKnown RBP eCLIP19.84■□□□□ 0.778e-7■□□□□ 8.6
UBE2N-201ENST00000318066 SEC24DO94855 1032 aaPredicted RBP19.84■□□□□ 0.77
UBE2N-201ENST00000318066 RARGP13631 454 aa19.84■□□□□ 0.77
UBE2N-201ENST00000318066 CNTFP26441 200 aa19.84■□□□□ 0.77
UBE2N-201ENST00000318066 PCSK1P29120 753 aa19.84■□□□□ 0.77
UBE2N-201ENST00000318066 MAGEB18Q96M61 343 aa19.84■□□□□ 0.77
UBE2N-201ENST00000318066 MOSPD1Q9UJG1 213 aa19.84■□□□□ 0.77
UBE2N-201ENST00000318066 TRPM1Q7Z4N2 1603 aa19.84■□□□□ 0.77
UBE2N-201ENST00000318066 HLA-DRAP01903 254 aa19.84■□□□□ 0.77
UBE2N-201ENST00000318066 THRAP10827 490 aa19.84■□□□□ 0.77
UBE2N-201ENST00000318066 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.84■□□□□ 0.77
UBE2N-201ENST00000318066 GTF2H3Q13889 308 aa19.84■□□□□ 0.77
UBE2N-201ENST00000318066 PRPF39Q86UA1 669 aaKnown RBP19.84■□□□□ 0.77
UBE2N-201ENST00000318066 NOA1Q8NC60 698 aaKnown RBP19.84■□□□□ 0.77
UBE2N-201ENST00000318066 ZSWIM1Q9BR11 485 aa19.84■□□□□ 0.77
UBE2N-201ENST00000318066 LSM7Q9UK45 103 aaKnown RBP19.84■□□□□ 0.77
UBE2N-201ENST00000318066 ZCCHC11Q5TAX3 1644 aaKnown RBP19.84■□□□□ 0.77
UBE2N-201ENST00000318066 PPP1R3GB7ZBB8 358 aa19.84■□□□□ 0.77
UBE2N-201ENST00000318066 SLCO1B7G3V0H7 640 aa19.84■□□□□ 0.77
UBE2N-201ENST00000318066 AIM2O14862 343 aa19.84■□□□□ 0.77
UBE2N-201ENST00000318066 CST8O60676 142 aa19.84■□□□□ 0.77
UBE2N-201ENST00000318066 SERPINI2O75830 405 aa19.84■□□□□ 0.77
UBE2N-201ENST00000318066 ANXA9O76027 345 aa19.84■□□□□ 0.77
UBE2N-201ENST00000318066 CPB1P15086 417 aa19.84■□□□□ 0.77
UBE2N-201ENST00000318066 CLK1P49759 484 aaKnown RBP19.84■□□□□ 0.77
UBE2N-201ENST00000318066 MOXD1Q6UVY6 613 aa19.84■□□□□ 0.77
UBE2N-201ENST00000318066 C16orf86Q6ZW13 317 aa19.84■□□□□ 0.77
UBE2N-201ENST00000318066 TPCN2Q8NHX9 752 aa19.84■□□□□ 0.77
UBE2N-201ENST00000318066 CRAMP1Q96RY5 1269 aa19.84■□□□□ 0.77
UBE2N-201ENST00000318066 TMEM161AQ9NX61 479 aa19.84■□□□□ 0.77
UBE2N-201ENST00000318066 KIAA1257Q9ULG3 409 aa19.84■□□□□ 0.77
UBE2N-201ENST00000318066 MAP3K13O43283 966 aa19.83■□□□□ 0.77
UBE2N-201ENST00000318066 TMED10P49755 219 aaKnown RBP19.83■□□□□ 0.77
UBE2N-201ENST00000318066 CSTF3Q12996 717 aaKnown RBP19.83■□□□□ 0.77
UBE2N-201ENST00000318066 FAM83EQ2M2I3 478 aa19.83■□□□□ 0.77
UBE2N-201ENST00000318066 AGR3Q8TD06 166 aa19.83■□□□□ 0.77
UBE2N-201ENST00000318066 RMDN2Q96LZ7 410 aa19.83■□□□□ 0.77
UBE2N-201ENST00000318066 GPR101Q96P66 508 aaPredicted RBP19.83■□□□□ 0.77
UBE2N-201ENST00000318066 ILKAPQ9H0C8 392 aaPredicted RBP19.83■□□□□ 0.77
UBE2N-201ENST00000318066 SOX13Q9UN79 622 aa19.83■□□□□ 0.77
UBE2N-201ENST00000318066 IQGAP3Q86VI3 1631 aa19.83■□□□□ 0.77
UBE2N-201ENST00000318066 ZNF263O14978 683 aa19.83■□□□□ 0.77
UBE2N-201ENST00000318066 ALBP02768 609 aa19.83■□□□□ 0.77
UBE2N-201ENST00000318066 SLC9A1P19634 815 aa19.83■□□□□ 0.77
UBE2N-201ENST00000318066 HNRNPH1P31943 449 aaKnown RBP19.83■□□□□ 0.77
UBE2N-201ENST00000318066 MEI1Q5TIA1 1274 aa19.83■□□□□ 0.77
UBE2N-201ENST00000318066 CYB5D1Q6P9G0 228 aa19.83■□□□□ 0.77
UBE2N-201ENST00000318066 HHIPL2Q6UWX4 724 aa19.83■□□□□ 0.77
UBE2N-201ENST00000318066 LRRC6Q86X45 466 aa19.83■□□□□ 0.77
UBE2N-201ENST00000318066 DCDC2Q9UHG0 476 aa19.83■□□□□ 0.77
UBE2N-201ENST00000318066 SCARF1Q14162 830 aa19.83■□□□□ 0.76
UBE2N-201ENST00000318066 CCDC85BQ15834 202 aaPredicted RBP19.83■□□□□ 0.76
UBE2N-201ENST00000318066 DEPDC1Q5TB30 811 aa19.83■□□□□ 0.76
UBE2N-201ENST00000318066 PAPD7Q5XG87 772 aaKnown RBP19.83■□□□□ 0.76
UBE2N-201ENST00000318066 REXO1L1PQ8IX06 675 aa19.83■□□□□ 0.76
UBE2N-201ENST00000318066 ARHGEF1Q92888 912 aaKnown RBP19.83■□□□□ 0.76
UBE2N-201ENST00000318066 PLEKHA8Q96JA3 519 aa19.83■□□□□ 0.76
UBE2N-201ENST00000318066 KATNAL1Q9BW62 490 aa19.83■□□□□ 0.76
UBE2N-201ENST00000318066 SNX9Q9Y5X1 595 aa19.83■□□□□ 0.76
UBE2N-201ENST00000318066 ABCC3O15438 1527 aa19.83■□□□□ 0.76
UBE2N-201ENST00000318066 A0A0A6YYK5 440 aaPredicted RBP19.83■□□□□ 0.76
UBE2N-201ENST00000318066 C21orf2O43822 256 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms