RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 TMEM39BQ9GZU3 492 aa7.92□□□□□ -1.14
CDHR3-201ENST00000317716 PSMC3IPQ9P2W1 217 aaPredicted RBP7.92□□□□□ -1.14
CDHR3-201ENST00000317716 EXOC7Q9UPT5 735 aa7.92□□□□□ -1.14
CDHR3-201ENST00000317716 YDJCA8MPS7 323 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 FCHO1O14526 889 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 MCF2LO15068 1137 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 GH2P01242 217 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 POLR2MP0CAP2 368 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 ENO3P13929 434 aaPredicted RBP7.91□□□□□ -1.14
CDHR3-201ENST00000317716 EIF2AK2P19525 551 aaKnown RBP7.91□□□□□ -1.14
CDHR3-201ENST00000317716 LMNB2Q03252 620 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 BNIP1Q12981 228 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 PTK7Q13308 1070 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 GIT2Q14161 759 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 MTFR1Q15390 333 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 CHI3L2Q15782 390 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 MROH9Q5TGP6 573 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 CC2D2BQ6DHV5 1058 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 FBXO33Q7Z6M2 555 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 ZBTB33Q86T24 672 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 ARHGEF19Q8IW93 802 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 VGLL2Q8N8G2 317 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 TCP10LQ8TDR4 215 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 CLMNQ96JQ2 1002 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 GCNAQ96QF7 691 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 DCUN1D5Q9BTE7 237 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 JMJD4Q9H9V9 463 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 GPBP1L1Q9HC44 474 aaPredicted RBP7.91□□□□□ -1.14
CDHR3-201ENST00000317716 KMT5AQ9NQR1 393 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 GGA3Q9NZ52 723 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 AJAP1Q9UKB5 411 aaPredicted RBP7.91□□□□□ -1.14
CDHR3-201ENST00000317716 CHRM1P11229 460 aaPredicted RBP7.91□□□□□ -1.14
CDHR3-201ENST00000317716 PSMA2P25787 234 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 MSX2P35548 267 aaPredicted RBP7.91□□□□□ -1.14
CDHR3-201ENST00000317716 FXR2P51116 673 aaKnown RBP eCLIP7.91□□□□□ -1.14
CDHR3-201ENST00000317716 RPS6P62753 249 aaKnown RBP7.91□□□□□ -1.14
CDHR3-201ENST00000317716 MRPS9P82933 396 aaKnown RBP7.91□□□□□ -1.14
CDHR3-201ENST00000317716 TFDP1Q14186 410 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 ZNF268Q14587 947 aaPredicted RBP7.91□□□□□ -1.14
CDHR3-201ENST00000317716 ATP13A4Q4VNC1 1196 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 GRAMD4Q6IC98 578 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 ANO7Q6IWH7 933 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 ATP11CQ8NB49 1132 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 NEDD1Q8NHV4 660 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 DCPSQ96C86 337 aaKnown RBP7.91□□□□□ -1.14
CDHR3-201ENST00000317716 PPP1R16BQ96T49 567 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 LXNQ9BS40 222 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 TRPV6Q9H1D0 765 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 CAAP1Q9H8G2 361 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 GPRC5CQ9NQ84 441 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 GALNT8Q9NY28 637 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 ADA2Q9NZK5 511 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 ARHGAP26Q9UNA1 814 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 NHSQ6T4R5 1651 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 SBF2Q86WG5 1849 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 CACNA1FO60840 1977 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 PALM3A6NDB9 673 aaPredicted RBP7.91□□□□□ -1.14
CDHR3-201ENST00000317716 CSDE1O75534 798 aaKnown RBP7.91□□□□□ -1.14
CDHR3-201ENST00000317716 TJP3O95049 919 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 AQP5P55064 265 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 TFAMQ00059 246 aaKnown RBP7.91□□□□□ -1.14
CDHR3-201ENST00000317716 DMP1Q13316 513 aaPredicted RBP7.91□□□□□ -1.14
CDHR3-201ENST00000317716 C16orf87Q6PH81 154 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 BTNL9Q6UXG8 535 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 ZNF662Q6ZS27 426 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 RAPH1Q70E73 1250 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 ZNF354CQ86Y25 554 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 RHOT1Q8IXI2 618 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 DEPDC1BQ8WUY9 529 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 ZNF75CPQ92670 426 aaPredicted RBP7.91□□□□□ -1.14
CDHR3-201ENST00000317716 ZNF512BQ96KM6 892 aaPredicted RBP7.91□□□□□ -1.14
CDHR3-201ENST00000317716 TUBB6Q9BUF5 446 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 GRIP2Q9C0E4 1043 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 NGRNQ9NPE2 291 aaKnown RBP7.91□□□□□ -1.14
CDHR3-201ENST00000317716 ARL8BQ9NVJ2 186 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 SMG5Q9UPR3 1016 aaKnown RBP7.91□□□□□ -1.14
CDHR3-201ENST00000317716 ABCB11O95342 1321 aa7.91□□□□□ -1.14
CDHR3-201ENST00000317716 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.9□□□□□ -1.14
CDHR3-201ENST00000317716 ZNF541Q9H0D2 1346 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 FAM237BA0A1B0GVD1 139 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 TMEM150BA6NC51 233 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 TRIM49D1C9J1S8 452 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 GRIN3BO60391 1043 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 TPST1O60507 370 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 KRT37O76014 449 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 PSMG1O95456 288 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 LINGO3P0C6S8 592 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 PSMC1P62191 440 aaKnown RBP7.9□□□□□ -1.14
CDHR3-201ENST00000317716 ART3Q13508 389 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 EPHA7Q15375 998 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 HADHQ16836 314 aaKnown RBP7.9□□□□□ -1.14
CDHR3-201ENST00000317716 ABCB5Q2M3G0 1257 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 SEZ6Q53EL9 994 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 IRGCQ6NXR0 463 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 ANO5Q75V66 913 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 CYFIP1Q7L576 1253 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 SCUBE1Q8IWY4 988 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 ARHGAP18Q8N392 663 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 LRRN4Q8WUT4 740 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 CEP170P1Q96L14 293 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms