RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 CASP14P31944 242 aa23.95■■□□□ 1.43
CCDC85B-201ENST00000312579 USP8P40818 1118 aa23.95■■□□□ 1.43
CCDC85B-201ENST00000312579 CDR1P51861 262 aa23.95■■□□□ 1.43
CCDC85B-201ENST00000312579 SMAD3P84022 425 aaKnown RBP23.95■■□□□ 1.43
CCDC85B-201ENST00000312579 ZNF394Q53GI3 561 aa23.95■■□□□ 1.43
CCDC85B-201ENST00000312579 DDX53Q86TM3 631 aaKnown RBP23.95■■□□□ 1.43
CCDC85B-201ENST00000312579 OR6B3Q8NGW1 331 aa23.95■■□□□ 1.43
CCDC85B-201ENST00000312579 TIFAQ96CG3 184 aa23.95■■□□□ 1.43
CCDC85B-201ENST00000312579 TWNKQ96RR1 684 aa23.95■■□□□ 1.43
CCDC85B-201ENST00000312579 NUP58Q9BVL2 599 aa23.95■■□□□ 1.43
CCDC85B-201ENST00000312579 STK33Q9BYT3 514 aa23.95■■□□□ 1.43
CCDC85B-201ENST00000312579 SLC28A3Q9HAS3 691 aa23.95■■□□□ 1.43
CCDC85B-201ENST00000312579 CYP3A43Q9HB55 503 aa23.95■■□□□ 1.43
CCDC85B-201ENST00000312579 PCDHB4Q9Y5E5 795 aa23.95■■□□□ 1.43
CCDC85B-201ENST00000312579 PLXNA4Q9HCM2 1894 aa23.95■■□□□ 1.42
CCDC85B-201ENST00000312579 TSC2P49815 1807 aa23.95■■□□□ 1.42
CCDC85B-201ENST00000312579 ESPNB1AK53 854 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 NRDCO43847 1150 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 TACC1O75410 805 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 CYP11A1P05108 521 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 PAX3P23760 479 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 ACAT1P24752 427 aaKnown RBP23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 DNAJB1P25685 340 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 NDST1P52848 882 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 JAM2P57087 298 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 PLCB3Q01970 1234 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 KRT17Q04695 432 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 PRSS55Q6UWB4 352 aaPredicted RBP23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 VPS52Q8N1B4 723 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 WHAMMQ8TF30 809 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 AUTS2Q8WXX7 1259 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 ARNTL2Q8WYA1 636 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 LPIN3Q9BQK8 851 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 RTP3Q9BQQ7 232 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 PLVAPQ9BX97 442 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 FBXL5Q9UKA1 691 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 RWDD3Q9Y3V2 267 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 EPOPA6NHQ4 379 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 AKR1B15C9JRZ8 316 aaPredicted RBP23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 C5orf67F2Z3F1 127 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 F8VZ95 297 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 C2CD2LO14523 706 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 SOD2P04179 222 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 KRT5P13647 590 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 WARSP23381 471 aaKnown RBP23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 GNL1P36915 607 aaPredicted RBP23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 ELAVL2Q12926 359 aaKnown RBP23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 FIGNQ5HY92 759 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 VARS2Q5ST30 1063 aaKnown RBP23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 PRPF38BQ5VTL8 546 aaKnown RBP23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 OVOS1Q6IE37 1185 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 TMEM270Q6UE05 265 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 ENOSF1Q7L5Y1 443 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 DPH6Q7L8W6 267 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 SPPL3Q8TCT6 385 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 SHC3Q92529 594 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 FAXDC2Q96IV6 333 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 SPAG5Q96R06 1193 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 TTPALQ9BTX7 342 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 HERC2P3Q9BVR0 1158 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 SNX25Q9H3E2 840 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 DPEP3Q9H4B8 488 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 CAPN11Q9UMQ6 739 aa23.94■■□□□ 1.42
CCDC85B-201ENST00000312579 LRRC53A6NM62 1247 aa23.93■■□□□ 1.42
CCDC85B-201ENST00000312579 SYN3O14994 580 aa23.93■■□□□ 1.42
CCDC85B-201ENST00000312579 GRM6O15303 877 aa23.93■■□□□ 1.42
CCDC85B-201ENST00000312579 CILPO75339 1184 aa23.93■■□□□ 1.42
CCDC85B-201ENST00000312579 TYMPP19971 482 aa23.93■■□□□ 1.42
CCDC85B-201ENST00000312579 RFX1P22670 979 aa23.93■■□□□ 1.42
CCDC85B-201ENST00000312579 ADKP55263 362 aaKnown RBP23.93■■□□□ 1.42
CCDC85B-201ENST00000312579 CCDC142Q17RM4 750 aa23.93■■□□□ 1.42
CCDC85B-201ENST00000312579 USP41Q3LFD5 358 aa23.93■■□□□ 1.42
CCDC85B-201ENST00000312579 KIAA0319Q5VV43 1072 aa23.93■■□□□ 1.42
CCDC85B-201ENST00000312579 METTL23Q86XA0 190 aa23.93■■□□□ 1.42
CCDC85B-201ENST00000312579 FBXO22Q8NEZ5 403 aa23.93■■□□□ 1.42
CCDC85B-201ENST00000312579 RIN2Q8WYP3 895 aaPredicted RBP23.93■■□□□ 1.42
CCDC85B-201ENST00000312579 ELOVL4Q9GZR5 314 aa23.93■■□□□ 1.42
CCDC85B-201ENST00000312579 ACP6Q9NPH0 428 aa23.93■■□□□ 1.42
CCDC85B-201ENST00000312579 CHST7Q9NS84 486 aa23.93■■□□□ 1.42
CCDC85B-201ENST00000312579 DDX43Q9NXZ2 648 aaKnown RBP23.93■■□□□ 1.42
CCDC85B-201ENST00000312579 BARX2Q9UMQ3 279 aaPredicted RBP23.93■■□□□ 1.42
CCDC85B-201ENST00000312579 TRIOBPQ9H2D6 2365 aa23.93■■□□□ 1.42
CCDC85B-201ENST00000312579 CARNS1A5YM72 827 aa23.92■■□□□ 1.42
CCDC85B-201ENST00000312579 A8MXQ7 604 aa23.92■■□□□ 1.42
CCDC85B-201ENST00000312579 GABRDO14764 452 aa23.92■■□□□ 1.42
CCDC85B-201ENST00000312579 YWHAHQ04917 246 aaPredicted RBP23.92■■□□□ 1.42
CCDC85B-201ENST00000312579 INCA1Q0VD86 236 aa23.92■■□□□ 1.42
CCDC85B-201ENST00000312579 LRIT3Q3SXY7 679 aa23.92■■□□□ 1.42
CCDC85B-201ENST00000312579 E4F1Q66K89 784 aaPredicted RBP23.92■■□□□ 1.42
CCDC85B-201ENST00000312579 CNGA4Q8IV77 575 aa23.92■■□□□ 1.42
CCDC85B-201ENST00000312579 TMEM86AQ8N2M4 240 aa23.92■■□□□ 1.42
CCDC85B-201ENST00000312579 POF1BQ8WVV4 589 aa23.92■■□□□ 1.42
CCDC85B-201ENST00000312579 TMEM209Q96SK2 561 aa23.92■■□□□ 1.42
CCDC85B-201ENST00000312579 DSEQ9UL01 958 aa23.92■■□□□ 1.42
CCDC85B-201ENST00000312579 STXBP5LQ9Y2K9 1186 aa23.92■■□□□ 1.42
CCDC85B-201ENST00000312579 PCDHGC5Q9Y5F6 944 aa23.92■■□□□ 1.42
CCDC85B-201ENST00000312579 A0A1W2PPC1 479 aa23.91■■□□□ 1.42
CCDC85B-201ENST00000312579 MFAP3LO75121 409 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms