RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 RAB21Q9UL25 225 aa17.79■□□□□ 0.44
CLCF1-201ENST00000312438 TMEM110-MUSTN1A8MSY1 372 aa17.78■□□□□ 0.44
CLCF1-201ENST00000312438 MYO1FO00160 1098 aa17.78■□□□□ 0.44
CLCF1-201ENST00000312438 PIRO00625 290 aa17.78■□□□□ 0.44
CLCF1-201ENST00000312438 VDRP11473 427 aa17.78■□□□□ 0.44
CLCF1-201ENST00000312438 GRK4P32298 578 aa17.78■□□□□ 0.44
CLCF1-201ENST00000312438 PLEKHA7Q6IQ23 1121 aa17.78■□□□□ 0.44
CLCF1-201ENST00000312438 MMS22LQ6ZRQ5 1243 aa17.78■□□□□ 0.44
CLCF1-201ENST00000312438 USP38Q8NB14 1042 aa17.78■□□□□ 0.44
CLCF1-201ENST00000312438 ELOVL4Q9GZR5 314 aa17.78■□□□□ 0.44
CLCF1-201ENST00000312438 CARD9Q9H257 536 aa17.78■□□□□ 0.44
CLCF1-201ENST00000312438 FAM105AQ9NUU6 356 aa17.78■□□□□ 0.44
CLCF1-201ENST00000312438 TTC7AQ9ULT0 858 aaPredicted RBP17.78■□□□□ 0.44
CLCF1-201ENST00000312438 SNX9Q9Y5X1 595 aa17.78■□□□□ 0.44
CLCF1-201ENST00000312438 SCINQ9Y6U3 715 aa17.78■□□□□ 0.44
CLCF1-201ENST00000312438 TARSL2A2RTX5 802 aaKnown RBP17.77■□□□□ 0.44
CLCF1-201ENST00000312438 PNPLA4P41247 253 aa17.77■□□□□ 0.44
CLCF1-201ENST00000312438 RNASE9P60153 205 aaKnown RBP17.77■□□□□ 0.44
CLCF1-201ENST00000312438 MAMLD1Q13495 774 aa17.77■□□□□ 0.44
CLCF1-201ENST00000312438 BRD3Q15059 726 aa17.77■□□□□ 0.44
CLCF1-201ENST00000312438 CNGA2Q16280 664 aa17.77■□□□□ 0.44
CLCF1-201ENST00000312438 WDTC1Q8N5D0 677 aa17.77■□□□□ 0.44
CLCF1-201ENST00000312438 ARRDC4Q8NCT1 418 aa17.77■□□□□ 0.44
CLCF1-201ENST00000312438 C1orf131Q8NDD1 294 aaKnown RBP17.77■□□□□ 0.44
CLCF1-201ENST00000312438 HEXIM2Q96MH2 286 aaKnown RBP17.77■□□□□ 0.44
CLCF1-201ENST00000312438 TWNKQ96RR1 684 aa17.77■□□□□ 0.44
CLCF1-201ENST00000312438 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.77■□□□□ 0.44
CLCF1-201ENST00000312438 NT5C1AQ9BXI3 368 aa17.77■□□□□ 0.44
CLCF1-201ENST00000312438 PARVAQ9NVD7 372 aa17.77■□□□□ 0.44
CLCF1-201ENST00000312438 ANAPC7Q9UJX3 599 aa17.77■□□□□ 0.44
CLCF1-201ENST00000312438 SLC1A1P43005 524 aa17.77■□□□□ 0.43
CLCF1-201ENST00000312438 CLCN6P51797 869 aa17.77■□□□□ 0.43
CLCF1-201ENST00000312438 NDST1P52848 882 aa17.77■□□□□ 0.43
CLCF1-201ENST00000312438 HTRA3P83110 453 aa17.77■□□□□ 0.43
CLCF1-201ENST00000312438 CLUL1Q15846 466 aa17.77■□□□□ 0.43
CLCF1-201ENST00000312438 C2CD6Q53TS8 623 aa17.77■□□□□ 0.43
CLCF1-201ENST00000312438 FAM26DQ5JW98 314 aa17.77■□□□□ 0.43
CLCF1-201ENST00000312438 FBXO47Q5MNV8 452 aa17.77■□□□□ 0.43
CLCF1-201ENST00000312438 ERICH1Q86X53 443 aa17.77■□□□□ 0.43
CLCF1-201ENST00000312438 BTBD6Q96KE9 485 aa17.77■□□□□ 0.43
CLCF1-201ENST00000312438 AGO3Q9H9G7 860 aaKnown RBP17.77■□□□□ 0.43
CLCF1-201ENST00000312438 ERVK-5Q9HDB9 667 aa17.77■□□□□ 0.43
CLCF1-201ENST00000312438 TRMT13Q9NUP7 481 aaKnown RBP17.77■□□□□ 0.43
CLCF1-201ENST00000312438 RNF19AQ9NV58 838 aa17.77■□□□□ 0.43
CLCF1-201ENST00000312438 MYH10P35580 1976 aa17.77■□□□□ 0.43
CLCF1-201ENST00000312438 CCDC66A2RUB6 948 aa17.76■□□□□ 0.43
CLCF1-201ENST00000312438 CCDC151A5D8V7 595 aa17.76■□□□□ 0.43
CLCF1-201ENST00000312438 PGRMC1O00264 195 aaKnown RBP17.76■□□□□ 0.43
CLCF1-201ENST00000312438 PPEF2O14830 753 aa17.76■□□□□ 0.43
CLCF1-201ENST00000312438 SPOPO43791 374 aa17.76■□□□□ 0.43
CLCF1-201ENST00000312438 CAND2O75155 1236 aa17.76■□□□□ 0.43
CLCF1-201ENST00000312438 ITGA4P13612 1032 aa17.76■□□□□ 0.43
CLCF1-201ENST00000312438 MCM3P25205 808 aa17.76■□□□□ 0.43
CLCF1-201ENST00000312438 GLE1Q53GS7 698 aaKnown RBP17.76■□□□□ 0.43
CLCF1-201ENST00000312438 WDR93Q6P2C0 686 aa17.76■□□□□ 0.43
CLCF1-201ENST00000312438 DENND1BQ6P3S1 775 aa17.76■□□□□ 0.43
CLCF1-201ENST00000312438 PHLDB2Q86SQ0 1253 aa17.76■□□□□ 0.43
CLCF1-201ENST00000312438 CD101Q93033 1021 aa17.76■□□□□ 0.43
CLCF1-201ENST00000312438 ZNF560Q96MR9 790 aa17.76■□□□□ 0.43
CLCF1-201ENST00000312438 PNKPQ96T60 521 aa17.76■□□□□ 0.43
CLCF1-201ENST00000312438 RBM12Q9NTZ6 932 aaKnown RBP17.76■□□□□ 0.43
CLCF1-201ENST00000312438 HMGXB4Q9UGU5 601 aa17.76■□□□□ 0.43
CLCF1-201ENST00000312438 TMEM59LQ9UK28 342 aa17.76■□□□□ 0.43
CLCF1-201ENST00000312438 PADI3Q9ULW8 664 aa17.76■□□□□ 0.43
CLCF1-201ENST00000312438 SQORQ9Y6N5 450 aa17.76■□□□□ 0.43
CLCF1-201ENST00000312438 ANK1P16157 1881 aa17.76■□□□□ 0.43
CLCF1-201ENST00000312438 PEX5P50542 639 aa17.75■□□□□ 0.43
CLCF1-201ENST00000312438 TRIM71Q2Q1W2 868 aaKnown RBP17.75■□□□□ 0.43
CLCF1-201ENST00000312438 SGO2Q562F6 1265 aa17.75■□□□□ 0.43
CLCF1-201ENST00000312438 TMCO3Q6UWJ1 677 aa17.75■□□□□ 0.43
CLCF1-201ENST00000312438 FEZF2Q8TBJ5 459 aa17.75■□□□□ 0.43
CLCF1-201ENST00000312438 TRAIPQ9BWF2 469 aa17.75■□□□□ 0.43
CLCF1-201ENST00000312438 SLC38A7Q9NVC3 462 aa17.75■□□□□ 0.43
CLCF1-201ENST00000312438 GDAP2Q9NXN4 497 aa17.75■□□□□ 0.43
CLCF1-201ENST00000312438 STRIP2Q9ULQ0 834 aa17.75■□□□□ 0.43
CLCF1-201ENST00000312438 PCDHA3Q9Y5H8 950 aa17.75■□□□□ 0.43
CLCF1-201ENST00000312438 KPNA7A9QM74 516 aa17.75■□□□□ 0.43
CLCF1-201ENST00000312438 CTNNA2P26232 953 aa17.75■□□□□ 0.43
CLCF1-201ENST00000312438 LRPAP1P30533 357 aa17.75■□□□□ 0.43
CLCF1-201ENST00000312438 CD52P31358 61 aa17.75■□□□□ 0.43
CLCF1-201ENST00000312438 CTNNA1P35221 906 aaKnown RBP17.75■□□□□ 0.43
CLCF1-201ENST00000312438 PAK2Q13177 524 aa17.75■□□□□ 0.43
CLCF1-201ENST00000312438 ORC1Q13415 861 aa17.75■□□□□ 0.43
CLCF1-201ENST00000312438 STILQ15468 1287 aa17.75■□□□□ 0.43
CLCF1-201ENST00000312438 MRPL10Q7Z7H8 261 aaKnown RBP17.75■□□□□ 0.43
CLCF1-201ENST00000312438 UNC93AQ86WB7 457 aa17.75■□□□□ 0.43
CLCF1-201ENST00000312438 HNRNPLLQ8WVV9 542 aaKnown RBP17.75■□□□□ 0.43
CLCF1-201ENST00000312438 ALG3Q92685 438 aa17.75■□□□□ 0.43
CLCF1-201ENST00000312438 NAP1L3Q99457 506 aaPredicted RBP17.75■□□□□ 0.43
CLCF1-201ENST00000312438 LCMT1Q9UIC8 334 aa17.75■□□□□ 0.43
CLCF1-201ENST00000312438 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.75■□□□□ 0.43
CLCF1-201ENST00000312438 GIT1Q9Y2X7 761 aa17.75■□□□□ 0.43
CLCF1-201ENST00000312438 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.75■□□□□ 0.43
CLCF1-201ENST00000312438 TRIP12Q14669 1992 aaPredicted RBP17.74■□□□□ 0.43
CLCF1-201ENST00000312438 PTGESO14684 152 aa17.74■□□□□ 0.43
CLCF1-201ENST00000312438 ZNF623O75123 536 aa17.74■□□□□ 0.43
CLCF1-201ENST00000312438 GHRP10912 638 aa17.74■□□□□ 0.43
CLCF1-201ENST00000312438 TAF6P49848 677 aa17.74■□□□□ 0.43
CLCF1-201ENST00000312438 TAP1Q03518 808 aa17.74■□□□□ 0.43
CLCF1-201ENST00000312438 SOX4Q06945 474 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms