RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 FOXR2Q6PJQ5 311 aa8.86□□□□□ -0.99
CHD6-201ENST00000309279 LRRC55Q6ZSA7 311 aa8.86□□□□□ -0.99
CHD6-201ENST00000309279 HS2ST1Q7LGA3 356 aa8.86□□□□□ -0.99
CHD6-201ENST00000309279 THNSL1Q8IYQ7 743 aa8.86□□□□□ -0.99
CHD6-201ENST00000309279 ABI1Q8IZP0 508 aa8.86□□□□□ -0.99
CHD6-201ENST00000309279 DHTKD1Q96HY7 919 aaPredicted RBP8.86□□□□□ -0.99
CHD6-201ENST00000309279 DEPDC7Q96QD5 511 aa8.86□□□□□ -0.99
CHD6-201ENST00000309279 GAD1Q99259 594 aa8.86□□□□□ -0.99
CHD6-201ENST00000309279 AP1M1Q9BXS5 423 aa8.86□□□□□ -0.99
CHD6-201ENST00000309279 MRPL9Q9BYD2 267 aaKnown RBP8.86□□□□□ -0.99
CHD6-201ENST00000309279 SEMA6BQ9H3T3 888 aa8.86□□□□□ -0.99
CHD6-201ENST00000309279 PLEKHA5Q9HAU0 1116 aa8.86□□□□□ -0.99
CHD6-201ENST00000309279 TOPORSQ9NS56 1045 aaPredicted RBP8.86□□□□□ -0.99
CHD6-201ENST00000309279 DMAC2Q9NW81 257 aa8.86□□□□□ -0.99
CHD6-201ENST00000309279 GTF3C4Q9UKN8 822 aa8.86□□□□□ -0.99
CHD6-201ENST00000309279 YBX2Q9Y2T7 364 aaKnown RBP8.86□□□□□ -0.99
CHD6-201ENST00000309279 RALGAPA2Q2PPJ7 1873 aa8.86□□□□□ -0.99
CHD6-201ENST00000309279 NLRC5Q86WI3 1866 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 TTC26A0AVF1 554 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 LINC01553A4QN01 128 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 FOXN3O00409 490 aaPredicted RBP8.85□□□□□ -0.99
CHD6-201ENST00000309279 BIN1O00499 593 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 SOX1O00570 391 aaPredicted RBP8.85□□□□□ -0.99
CHD6-201ENST00000309279 PTGESO14684 152 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 EXTL3O43909 919 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 CA3P07451 260 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 MSL3P1P0C860 447 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 HARSP12081 509 aaKnown RBP8.85□□□□□ -0.99
CHD6-201ENST00000309279 KCNE1P15382 129 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 CD44P16070 742 aaKnown RBP8.85□□□□□ -0.99
CHD6-201ENST00000309279 DNAJB2P25686 324 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 SERPINB3P29508 390 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 MLH1P40692 756 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 TNFSF9P41273 254 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 MATR3P43243 847 aaKnown RBP eCLIP8.85□□□□□ -0.991e-6■■□□□ 12.4
CHD6-201ENST00000309279 YARSP54577 528 aaKnown RBP8.85□□□□□ -0.99
CHD6-201ENST00000309279 OSTNP61366 133 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 CLDN10P78369 228 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 EIF2B5Q13144 721 aaKnown RBP8.85□□□□□ -0.99
CHD6-201ENST00000309279 BTG3Q14201 252 aaPredicted RBP8.85□□□□□ -0.99
CHD6-201ENST00000309279 NAB2Q15742 525 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 SKOR2Q2VWA4 1001 aaPredicted RBP8.85□□□□□ -0.99
CHD6-201ENST00000309279 EDRF1Q3B7T1 1238 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.85□□□□□ -0.99
CHD6-201ENST00000309279 SEZ6Q53EL9 994 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 ZBTB41Q5SVQ8 909 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 GPR153Q6NV75 609 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 MZT2BQ6NZ67 158 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 CYP26C1Q6V0L0 522 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 LRRC43Q8N309 656 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 LILRB2Q8N423 598 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 FIBCD1Q8N539 461 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 ZSWIM2Q8NEG5 633 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 SNX27Q96L92 541 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 ZFP42Q96MM3 310 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 UROC1Q96N76 676 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 APOL6Q9BWW8 343 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 CXCL16Q9H2A7 254 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 CWH43Q9H720 699 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 KIAA1586Q9HCI6 787 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 SRA1Q9HD15 236 aaKnown RBP8.85□□□□□ -0.99
CHD6-201ENST00000309279 TBC1D13Q9NVG8 400 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 MIOSQ9NXC5 875 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 HSPBP1Q9NZL4 362 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 FBXO10Q9UK96 956 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 KIAA1671Q9BY89 1806 aa8.85□□□□□ -0.99
CHD6-201ENST00000309279 TMEM265A0A087WTH1 108 aa8.84□□□□□ -0.99
CHD6-201ENST00000309279 SMIM28A0A1B0GU29 152 aa8.84□□□□□ -0.99
CHD6-201ENST00000309279 PSMA7O14818 248 aa8.84□□□□□ -0.99
CHD6-201ENST00000309279 CLIC2O15247 247 aa8.84□□□□□ -0.99
CHD6-201ENST00000309279 AKAP10O43572 662 aa8.84□□□□□ -0.99
CHD6-201ENST00000309279 CALUO43852 315 aaPredicted RBP8.84□□□□□ -0.99
CHD6-201ENST00000309279 ARHGEF15O94989 841 aa8.84□□□□□ -0.99
CHD6-201ENST00000309279 SETSIPP0DME0 302 aa8.84□□□□□ -0.99
CHD6-201ENST00000309279 CXCL8P10145 99 aa8.84□□□□□ -0.99
CHD6-201ENST00000309279 CCNE1P24864 410 aa8.84□□□□□ -0.99
CHD6-201ENST00000309279 MAGEA8P43361 318 aa8.84□□□□□ -0.99
CHD6-201ENST00000309279 ACOT2P49753 483 aa8.84□□□□□ -0.99
CHD6-201ENST00000309279 TAP1Q03518 808 aa8.84□□□□□ -0.99
CHD6-201ENST00000309279 DSC1Q08554 894 aa8.84□□□□□ -0.99
CHD6-201ENST00000309279 GRIK3Q13003 919 aa8.84□□□□□ -0.99
CHD6-201ENST00000309279 STIM1Q13586 685 aa8.84□□□□□ -0.99
CHD6-201ENST00000309279 NFKBIBQ15653 356 aa8.84□□□□□ -0.99
CHD6-201ENST00000309279 QPCTQ16769 361 aa8.84□□□□□ -0.99
CHD6-201ENST00000309279 RTL10Q7L3V2 364 aa8.84□□□□□ -0.99
CHD6-201ENST00000309279 TMC7Q7Z402 723 aa8.84□□□□□ -0.99
CHD6-201ENST00000309279 DDX42Q86XP3 938 aaKnown RBP eCLIP8.84□□□□□ -0.99
CHD6-201ENST00000309279 CD302Q8IX05 232 aa8.84□□□□□ -0.99
CHD6-201ENST00000309279 GPD1LQ8N335 351 aa8.84□□□□□ -0.99
CHD6-201ENST00000309279 MLKLQ8NB16 471 aa8.84□□□□□ -0.99
CHD6-201ENST00000309279 XXYLT1Q8NBI6 393 aa8.84□□□□□ -0.99
CHD6-201ENST00000309279 URGCPQ8TCY9 931 aa8.84□□□□□ -0.99
CHD6-201ENST00000309279 TIFAQ96CG3 184 aa8.84□□□□□ -0.99
CHD6-201ENST00000309279 PPP1R10Q96QC0 940 aaKnown RBP8.84□□□□□ -0.99
CHD6-201ENST00000309279 PCIF1Q9H4Z3 704 aa8.84□□□□□ -0.99
CHD6-201ENST00000309279 ASB7Q9H672 318 aa8.84□□□□□ -0.99
CHD6-201ENST00000309279 RPF1Q9H9Y2 349 aaKnown RBP8.84□□□□□ -0.99
CHD6-201ENST00000309279 SLC28A3Q9HAS3 691 aa8.84□□□□□ -0.99
CHD6-201ENST00000309279 SMYD2Q9NRG4 433 aa8.84□□□□□ -0.99
CHD6-201ENST00000309279 KLK14Q9P0G3 267 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms