RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 C3orf62Q6ZUJ4 267 aa11.75□□□□□ -0.53
PTPN7-201ENST00000309017 RNF217Q8TC41 542 aa11.75□□□□□ -0.53
PTPN7-201ENST00000309017 TTC1Q99614 292 aa11.75□□□□□ -0.53
PTPN7-201ENST00000309017 ARMCX1Q9P291 453 aa11.75□□□□□ -0.53
PTPN7-201ENST00000309017 LPXNO60711 386 aa11.75□□□□□ -0.53
PTPN7-201ENST00000309017 RBM41Q96IZ5 413 aaKnown RBP11.75□□□□□ -0.53
PTPN7-201ENST00000309017 TUBB6Q9BUF5 446 aa11.75□□□□□ -0.53
PTPN7-201ENST00000309017 ZCWPW1Q9H0M4 648 aa11.75□□□□□ -0.53
PTPN7-201ENST00000309017 SAR1AQ9NR31 198 aa11.75□□□□□ -0.53
PTPN7-201ENST00000309017 KCNH7Q9NS40 1196 aa11.75□□□□□ -0.53
PTPN7-201ENST00000309017 C2orf71A6NGG8 1288 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 MAGEB2O15479 319 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 ROR2Q01974 943 aaKnown RBP11.74□□□□□ -0.53
PTPN7-201ENST00000309017 SLC34A1Q06495 639 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 ACSBG2Q5FVE4 666 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 SPOPLQ6IQ16 392 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 MFSD7Q6UXD7 560 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 MFN1Q8IWA4 741 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 CTAGE3PQ8IX95 158 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 ENDOVQ8N8Q3 282 aaKnown RBP11.74□□□□□ -0.53
PTPN7-201ENST00000309017 GMCL1P1Q8NEA9 526 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 EXD1Q8NHP7 514 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 RSAD2Q8WXG1 361 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 ZNF333Q96JL9 665 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 TMEM120AQ9BXJ8 343 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 TDRD3Q9H7E2 651 aaKnown RBP11.74□□□□□ -0.53
PTPN7-201ENST00000309017 C10orf88Q9H8K7 445 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 AVENQ9NQS1 362 aaPredicted RBP11.74□□□□□ -0.53
PTPN7-201ENST00000309017 C10orf71Q711Q0 1435 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 NHSQ6T4R5 1651 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 NPTXRO95502 500 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 HARSP12081 509 aaKnown RBP11.74□□□□□ -0.53
PTPN7-201ENST00000309017 GNA15P30679 374 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 GPC3P51654 580 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 BASP1P80723 227 aaKnown RBP11.74□□□□□ -0.53
PTPN7-201ENST00000309017 SYCP2LQ5T4T6 812 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 CWF19L1Q69YN2 538 aaKnown RBP11.74□□□□□ -0.53
PTPN7-201ENST00000309017 ATP11CQ8NB49 1132 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 ACER1Q8TDN7 264 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 DENND1AQ8TEH3 1009 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 CHURC1Q8WUH1 139 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 PAFAH2Q99487 392 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 MIPEPQ99797 713 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 DDX50Q9BQ39 737 aaKnown RBP11.74□□□□□ -0.53
PTPN7-201ENST00000309017 SYNCQ9H7C4 482 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.74□□□□□ -0.53
PTPN7-201ENST00000309017 KCNQ5Q9NR82 932 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 SLC17A7Q9P2U7 560 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 PPARGC1AQ9UBK2 798 aaKnown RBP11.74□□□□□ -0.53
PTPN7-201ENST00000309017 TBX20Q9UMR3 447 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 COL14A1Q05707 1796 aaKnown RBP11.74□□□□□ -0.53
PTPN7-201ENST00000309017 LIASO43766 372 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 PSMG1O95456 288 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 ENO1P06733 434 aaKnown RBP11.74□□□□□ -0.53
PTPN7-201ENST00000309017 MUTP22033 750 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 ARL4CP56559 192 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 LBRQ14739 615 aaKnown RBP11.74□□□□□ -0.53
PTPN7-201ENST00000309017 C11orf91Q3C1V1 193 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 DDX1Q92499 740 aaKnown RBP11.74□□□□□ -0.53
PTPN7-201ENST00000309017 FAM111AQ96PZ2 611 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 MXRA8Q9BRK3 442 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 SCINQ9Y6U3 715 aa11.74□□□□□ -0.53
PTPN7-201ENST00000309017 H3BRJ5 948 aa11.73□□□□□ -0.53
PTPN7-201ENST00000309017 GSC2O15499 205 aa11.73□□□□□ -0.53
PTPN7-201ENST00000309017 INHBAP08476 426 aa11.73□□□□□ -0.53
PTPN7-201ENST00000309017 SOX10P56693 466 aa11.73□□□□□ -0.53
PTPN7-201ENST00000309017 YWHAGP61981 247 aaKnown RBP eCLIP11.73□□□□□ -0.53
PTPN7-201ENST00000309017 KDSRQ06136 332 aa11.73□□□□□ -0.53
PTPN7-201ENST00000309017 EAPPQ56P03 285 aaPredicted RBP11.73□□□□□ -0.53
PTPN7-201ENST00000309017 CFAP157Q5JU67 520 aa11.73□□□□□ -0.53
PTPN7-201ENST00000309017 PPP1R15BQ5SWA1 713 aa11.73□□□□□ -0.53
PTPN7-201ENST00000309017 RILPQ96NA2 401 aa11.73□□□□□ -0.53
PTPN7-201ENST00000309017 RIT2Q99578 217 aa11.73□□□□□ -0.53
PTPN7-201ENST00000309017 SLC24A2Q9UI40 661 aa11.73□□□□□ -0.53
PTPN7-201ENST00000309017 CTDP1Q9Y5B0 961 aaPredicted RBP11.73□□□□□ -0.53
PTPN7-201ENST00000309017 B2RBV5 119 aa11.73□□□□□ -0.53
PTPN7-201ENST00000309017 I3L4J1 428 aa11.73□□□□□ -0.53
PTPN7-201ENST00000309017 ABLIM1O14639 778 aa11.73□□□□□ -0.53
PTPN7-201ENST00000309017 KITP10721 976 aa11.73□□□□□ -0.53
PTPN7-201ENST00000309017 PSMC4P43686 418 aa11.73□□□□□ -0.53
PTPN7-201ENST00000309017 MORF4L2Q15014 288 aa11.73□□□□□ -0.53
PTPN7-201ENST00000309017 KATNAL2Q8IYT4 538 aa11.73□□□□□ -0.53
PTPN7-201ENST00000309017 OGFOD1Q8N543 542 aa11.73□□□□□ -0.53
PTPN7-201ENST00000309017 FBXO28Q9NVF7 368 aa11.73□□□□□ -0.53
PTPN7-201ENST00000309017 CCPG1Q9ULG6 757 aa11.73□□□□□ -0.53
PTPN7-201ENST00000309017 TBX10O75333 385 aa11.73□□□□□ -0.53
PTPN7-201ENST00000309017 MYL2P10916 166 aa11.73□□□□□ -0.53
PTPN7-201ENST00000309017 ADRA2BP18089 450 aa11.73□□□□□ -0.53
PTPN7-201ENST00000309017 KLRC2P26717 231 aa11.73□□□□□ -0.53
PTPN7-201ENST00000309017 GTF2BQ00403 316 aa11.73□□□□□ -0.53
PTPN7-201ENST00000309017 KLF1Q13351 362 aaPredicted RBP11.73□□□□□ -0.53
PTPN7-201ENST00000309017 PLEKHG4Q58EX7 1191 aa11.73□□□□□ -0.53
PTPN7-201ENST00000309017 ENOSF1Q7L5Y1 443 aa11.73□□□□□ -0.53
PTPN7-201ENST00000309017 LDHDQ86WU2 507 aa11.73□□□□□ -0.53
PTPN7-201ENST00000309017 RCOR2Q8IZ40 523 aa11.73□□□□□ -0.53
PTPN7-201ENST00000309017 SAE1Q9UBE0 346 aaPredicted RBP11.73□□□□□ -0.53
PTPN7-201ENST00000309017 FAM198AQ9UFP1 575 aa11.73□□□□□ -0.53
PTPN7-201ENST00000309017 ANGPTL2Q9UKU9 493 aa11.73□□□□□ -0.53
PTPN7-201ENST00000309017 MAP3K13O43283 966 aa11.72□□□□□ -0.53
PTPN7-201ENST00000309017 UNGP13051 313 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms