RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 IRF5Q13568 498 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 HLTFQ14527 1009 aaKnown RBP eCLIP6.95□□□□□ -1.3
USP47-201ENST00000305481 MFSD10Q14728 455 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 TMEM132DQ14C87 1099 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 UAP1Q16222 522 aaPredicted RBP6.95□□□□□ -1.3
USP47-201ENST00000305481 HSP90B2PQ58FF3 399 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 ALS2CLQ60I27 953 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 CHADLQ6NUI6 762 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 MAGOHBQ96A72 148 aaKnown RBP6.95□□□□□ -1.3
USP47-201ENST00000305481 ZMAT2Q96NC0 199 aaKnown RBP6.95□□□□□ -1.3
USP47-201ENST00000305481 OSMRQ99650 979 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 TRIM31Q9BZY9 425 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 MRPL47Q9HD33 250 aaKnown RBP6.95□□□□□ -1.3
USP47-201ENST00000305481 ZDHHC18Q9NUE0 388 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.95□□□□□ -1.3
USP47-201ENST00000305481 TREHO43280 583 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 CILPO75339 1184 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 NPTXRO95502 500 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 HSPA6P17066 643 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 ATICP31939 592 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 CHRNA3P32297 505 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 DHX34Q14147 1143 aaKnown RBP6.95□□□□□ -1.3
USP47-201ENST00000305481 PPP2R5EQ16537 467 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 CYP4A22Q5TCH4 519 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 RGMBQ6NW40 437 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 CCDC137Q6PK04 289 aaKnown RBP6.95□□□□□ -1.3
USP47-201ENST00000305481 TMEM35BQ8NCS4 154 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 HPDLQ96IR7 371 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 FAXDC2Q96IV6 333 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 DPP3Q9NY33 737 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.95□□□□□ -1.3
USP47-201ENST00000305481 AGAP1Q9UPQ3 857 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 UTP11Q9Y3A2 253 aaKnown RBP6.95□□□□□ -1.3
USP47-201ENST00000305481 C2CD2Q9Y426 696 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 HES2Q9Y543 173 aa6.95□□□□□ -1.3
USP47-201ENST00000305481 SMIM35A0A1B0GVV1 85 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 FAM187AA6NFU0 413 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 CYP2C9P11712 490 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 COILP38432 576 aaPredicted RBP6.94□□□□□ -1.3
USP47-201ENST00000305481 KCNJ1P48048 391 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 LACTBP83111 547 aaPredicted RBP6.94□□□□□ -1.3
USP47-201ENST00000305481 KYAT1Q16773 422 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 PTPN20Q4JDL3 420 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 ZDHHC24Q6UX98 284 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 DNAJB3Q8WWF6 145 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 ARL8AQ96BM9 186 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 ZIC5Q96T25 663 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 ZNF518BQ9C0D4 1074 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 LHX5Q9H2C1 402 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 FAM204AQ9H8W3 233 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 RNF19AQ9NV58 838 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 SNTG2Q9NY99 539 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 SCINQ9Y6U3 715 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 TRIP11Q15643 1979 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 CITO14578 2027 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 F8VP50 259 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 PPEF2O14830 753 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 KRT14P02533 472 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 SLC10A3P09131 477 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 PAEPP09466 180 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 DARSP14868 501 aaKnown RBP6.94□□□□□ -1.3
USP47-201ENST00000305481 HSD17B3P37058 310 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 PSEN2P49810 448 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 CRHR2Q13324 411 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 KLF1Q13351 362 aaPredicted RBP6.94□□□□□ -1.3
USP47-201ENST00000305481 ZBTB6Q15916 424 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 ATP13A4Q4VNC1 1196 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 TTMPQ5BVD1 217 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 SMYD5Q6GMV2 418 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 PPP1R2P3Q6NXS1 205 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 ALKAL1Q6UXT8 129 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 ERICH1Q86X53 443 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 C12orf50Q8NA57 414 aaPredicted RBP6.94□□□□□ -1.3
USP47-201ENST00000305481 TRPV1Q8NER1 839 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 C1orf54Q8WWF1 131 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 MCEEQ96PE7 176 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 ADPGKQ9BRR6 497 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 GCOM2Q9BZD3 368 aaPredicted RBP6.94□□□□□ -1.3
USP47-201ENST00000305481 LRRC19Q9H756 370 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 GRHL1Q9NZI5 618 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 ITGA11Q9UKX5 1188 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 TRIP12Q14669 1992 aaPredicted RBP6.94□□□□□ -1.3
USP47-201ENST00000305481 MYADML2A6NDP7 307 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 H0YGN5 161 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 CALB1P05937 261 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 CD19P15391 556 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 CYP3A5P20815 502 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 MAN1A1P33908 653 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 RPL21P46778 160 aaKnown RBP6.94□□□□□ -1.3
USP47-201ENST00000305481 DRG2P55039 364 aaKnown RBP6.94□□□□□ -1.3
USP47-201ENST00000305481 TXNRD3NBQ6F5E7 133 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 SLC27A1Q6PCB7 646 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 CATSPER4Q7RTX7 472 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 RHOT1Q8IXI2 618 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 KATNAL2Q8IYT4 538 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.94□□□□□ -1.3
USP47-201ENST00000305481 ATG4AQ8WYN0 398 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 KIF12Q96FN5 646 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 TMEM176AQ96HP8 235 aa6.94□□□□□ -1.3
USP47-201ENST00000305481 SNX27Q96L92 541 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms