RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 PDK1Q15118 436 aa22.02■■□□□ 1.12
LETM1-201ENST00000302787 VPS72Q15906 364 aa22.02■■□□□ 1.12
LETM1-201ENST00000302787 DCAF4L1Q3SXM0 396 aa22.02■■□□□ 1.12
LETM1-201ENST00000302787 IER5Q5VY09 327 aa22.02■■□□□ 1.12
LETM1-201ENST00000302787 MOXD1Q6UVY6 613 aa22.02■■□□□ 1.12
LETM1-201ENST00000302787 ARMC2Q8NEN0 867 aa22.02■■□□□ 1.12
LETM1-201ENST00000302787 E2F7Q96AV8 911 aa22.02■■□□□ 1.12
LETM1-201ENST00000302787 CASS4Q9NQ75 786 aa22.02■■□□□ 1.12
LETM1-201ENST00000302787 ZNF212Q9UDV6 495 aa22.02■■□□□ 1.12
LETM1-201ENST00000302787 E2F8A0AVK6 867 aa22.02■■□□□ 1.12
LETM1-201ENST00000302787 GH1P01241 217 aa22.02■■□□□ 1.12
LETM1-201ENST00000302787 POLBP06746 335 aa22.02■■□□□ 1.12
LETM1-201ENST00000302787 KLC1Q07866 573 aa22.02■■□□□ 1.12
LETM1-201ENST00000302787 GIT2Q14161 759 aa22.02■■□□□ 1.12
LETM1-201ENST00000302787 EPS8L3Q8TE67 593 aaKnown RBP22.02■■□□□ 1.12
LETM1-201ENST00000302787 TMEM39BQ9GZU3 492 aa22.02■■□□□ 1.12
LETM1-201ENST00000302787 GRID1Q9ULK0 1009 aa22.02■■□□□ 1.12
LETM1-201ENST00000302787 TLR2O60603 784 aa22.02■■□□□ 1.11
LETM1-201ENST00000302787 CASP4P49662 377 aa22.02■■□□□ 1.11
LETM1-201ENST00000302787 BATF3Q9NR55 127 aa22.02■■□□□ 1.11
LETM1-201ENST00000302787 ACADSBP45954 432 aa22.01■■□□□ 1.11
LETM1-201ENST00000302787 C17orf75Q9HAS0 396 aa22.01■■□□□ 1.11
LETM1-201ENST00000302787 CD4P01730 458 aa22.01■■□□□ 1.11
LETM1-201ENST00000302787 HDAC4P56524 1084 aa22.01■■□□□ 1.11
LETM1-201ENST00000302787 ABCE1P61221 599 aaKnown RBP22.01■■□□□ 1.11
LETM1-201ENST00000302787 PDAP1Q13442 181 aaKnown RBP22.01■■□□□ 1.11
LETM1-201ENST00000302787 ACCSLQ4AC99 568 aa22.01■■□□□ 1.11
LETM1-201ENST00000302787 COBLL1Q53SF7 1204 aa22.01■■□□□ 1.11
LETM1-201ENST00000302787 AGXT2Q9BYV1 514 aa22.01■■□□□ 1.11
LETM1-201ENST00000302787 TMBIM4Q9HC24 238 aa22.01■■□□□ 1.11
LETM1-201ENST00000302787 ADAMTS13Q76LX8 1427 aa22.01■■□□□ 1.11
LETM1-201ENST00000302787 SEC24DO94855 1032 aaPredicted RBP22.01■■□□□ 1.11
LETM1-201ENST00000302787 ANO4Q32M45 955 aa22.01■■□□□ 1.11
LETM1-201ENST00000302787 NAF1Q96HR8 494 aaKnown RBP22.01■■□□□ 1.11
LETM1-201ENST00000302787 PRMT7Q9NVM4 692 aaPredicted RBP22.01■■□□□ 1.11
LETM1-201ENST00000302787 NNMTP40261 264 aa22.01■■□□□ 1.11
LETM1-201ENST00000302787 DNAJC3Q13217 504 aa22.01■■□□□ 1.11
LETM1-201ENST00000302787 MFSD14CQ5VZR4 134 aa22.01■■□□□ 1.11
LETM1-201ENST00000302787 EFCAB12Q6NXP0 572 aa22.01■■□□□ 1.11
LETM1-201ENST00000302787 ELMSAN1Q6PJG2 1045 aa22.01■■□□□ 1.11
LETM1-201ENST00000302787 ACTRT1Q8TDG2 376 aa22.01■■□□□ 1.11
LETM1-201ENST00000302787 SCFD1Q8WVM8 642 aa22.01■■□□□ 1.11
LETM1-201ENST00000302787 CMTM5Q96DZ9 223 aa22.01■■□□□ 1.11
LETM1-201ENST00000302787 NSL1Q96IY1 281 aa22.01■■□□□ 1.11
LETM1-201ENST00000302787 MOSPD1Q9UJG1 213 aa22.01■■□□□ 1.11
LETM1-201ENST00000302787 FAM205AQ6ZU69 1335 aa22.01■■□□□ 1.11
LETM1-201ENST00000302787 CHI3L2Q15782 390 aa22■■□□□ 1.11
LETM1-201ENST00000302787 DNAJC9Q8WXX5 260 aa22■■□□□ 1.11
LETM1-201ENST00000302787 CTCFP49711 727 aaPredicted RBP22■■□□□ 1.11
LETM1-201ENST00000302787 RPS6P62753 249 aaKnown RBP22■■□□□ 1.11
LETM1-201ENST00000302787 CENPPQ6IPU0 288 aa22■■□□□ 1.11
LETM1-201ENST00000302787 C4orf22Q6V702 233 aa22■■□□□ 1.11
LETM1-201ENST00000302787 PRPF39Q86UA1 669 aaKnown RBP22■■□□□ 1.11
LETM1-201ENST00000302787 ZNF507Q8TCN5 953 aa22■■□□□ 1.11
LETM1-201ENST00000302787 GPRASP2Q96D09 838 aa22■■□□□ 1.11
LETM1-201ENST00000302787 MAP3K20Q9NYL2 800 aaKnown RBP22■■□□□ 1.11
LETM1-201ENST00000302787 C3orf20Q8ND61 904 aa22■■□□□ 1.11
LETM1-201ENST00000302787 MYCBPAPQ8TBZ2 947 aa22■■□□□ 1.11
LETM1-201ENST00000302787 ZBED2Q9BTP6 218 aa22■■□□□ 1.11
LETM1-201ENST00000302787 NSMCE4AQ9NXX6 385 aa22■■□□□ 1.11
LETM1-201ENST00000302787 CDYLQ9Y232 598 aa22■■□□□ 1.11
LETM1-201ENST00000302787 FGFR2P21802 821 aa22■■□□□ 1.11
LETM1-201ENST00000302787 PKN1Q16512 942 aa22■■□□□ 1.11
LETM1-201ENST00000302787 ATG4AQ8WYN0 398 aa22■■□□□ 1.11
LETM1-201ENST00000302787 AIM2O14862 343 aa22■■□□□ 1.11
LETM1-201ENST00000302787 POTEAQ6S8J7 498 aa22■■□□□ 1.11
LETM1-201ENST00000302787 STAU2Q9NUL3 570 aaKnown RBP eCLIP22■■□□□ 1.11
LETM1-201ENST00000302787 ARHGAP20Q9P2F6 1191 aa22■■□□□ 1.11
LETM1-201ENST00000302787 NIPSNAP3AQ9UFN0 247 aaPredicted RBP22■■□□□ 1.11
LETM1-201ENST00000302787 KCNA3P22001 575 aa21.99■■□□□ 1.11
LETM1-201ENST00000302787 TEX9Q8N6V9 391 aa21.99■■□□□ 1.11
LETM1-201ENST00000302787 ATG4CQ96DT6 458 aa21.99■■□□□ 1.11
LETM1-201ENST00000302787 ITSN1Q15811 1721 aa21.99■■□□□ 1.11
LETM1-201ENST00000302787 TMEM62Q0P6H9 643 aa21.99■■□□□ 1.11
LETM1-201ENST00000302787 INTS5Q6P9B9 1019 aaKnown RBP21.99■■□□□ 1.11
LETM1-201ENST00000302787 CBWD2Q8IUF1 395 aa21.99■■□□□ 1.11
LETM1-201ENST00000302787 SLC7A14Q8TBB6 771 aa21.99■■□□□ 1.11
LETM1-201ENST00000302787 HPDLQ96IR7 371 aa21.99■■□□□ 1.11
LETM1-201ENST00000302787 HNRNPH1P31943 449 aaKnown RBP21.99■■□□□ 1.11
LETM1-201ENST00000302787 EZH2Q15910 746 aaKnown RBP21.99■■□□□ 1.11
LETM1-201ENST00000302787 MROH9Q5TGP6 573 aa21.99■■□□□ 1.11
LETM1-201ENST00000302787 KIRREL3Q8IZU9 778 aa21.99■■□□□ 1.11
LETM1-201ENST00000302787 COG4Q9H9E3 785 aa21.99■■□□□ 1.11
LETM1-201ENST00000302787 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.99■■□□□ 1.116e-8■■□□□ 12.7
LETM1-201ENST00000302787 ARHGAP26Q9UNA1 814 aa21.99■■□□□ 1.11
LETM1-201ENST00000302787 ICAM1P05362 532 aa21.98■■□□□ 1.11
LETM1-201ENST00000302787 HMOX2P30519 316 aa21.98■■□□□ 1.11
LETM1-201ENST00000302787 MEI1Q5TIA1 1274 aa21.98■■□□□ 1.11
LETM1-201ENST00000302787 KIF1CO43896 1103 aaKnown RBP21.98■■□□□ 1.11
LETM1-201ENST00000302787 SREBF1P36956 1147 aa21.98■■□□□ 1.11
LETM1-201ENST00000302787 DCAF6Q58WW2 860 aa21.98■■□□□ 1.11
LETM1-201ENST00000302787 TMEM154Q6P9G4 183 aa21.98■■□□□ 1.11
LETM1-201ENST00000302787 FRMD8Q9BZ67 464 aaPredicted RBP21.98■■□□□ 1.11
LETM1-201ENST00000302787 ANKZF1Q9H8Y5 726 aa21.98■■□□□ 1.11
LETM1-201ENST00000302787 TRIM49D1C9J1S8 452 aa21.98■■□□□ 1.11
LETM1-201ENST00000302787 DYNC1LI2O43237 492 aaPredicted RBP21.98■■□□□ 1.11
LETM1-201ENST00000302787 SV2CQ496J9 727 aa21.98■■□□□ 1.11
LETM1-201ENST00000302787 DAB2IPQ5VWQ8 1189 aa21.98■■□□□ 1.11
LETM1-201ENST00000302787 TTC23LQ6PF05 361 aa21.98■■□□□ 1.11
LETM1-201ENST00000302787 ZNF571Q7Z3V5 609 aaPredicted RBP21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms